Structural characterization of two benzene-1,2-di-amine complexes of zinc chloride: a mol-ecular compound and a co-crystal salt

Synthesis, crystal structure and Hirshfeld surface analysis of di-aqua-bis-(o-phenyl-enedi-amine-κ2N,N')nickel(II) naphthalene-1,5-di-sulfonate

The reaction of o-phenyl-enedi-amine (OPD), sodium naphthalene1,5-di-sulfonate (Na2NDS) and nickel sulfate in an ethanol-water mixture yielded the title compound, [Ni(OPD)2(H2O)2]·NDS or [Ni(C6H8N2)2(H2O)2](C10H6O6S2). This salt consists of a complex [Ni(OPD)2(H2O)2]2+ cation with two bidentate OPD ligands and trans aqua ligands, and a non-coordinating NDS2- anion, which is the double-deprotonated form of H2NDS. The NiII atom is situated at a center of inversion and exhibits a slightly tetra-gonally distorted {O2N4} octa-hedral coordination environment, with four shorter equatorial Ni-N bonds [2.0775 (17) and 2.0924 (18) Å] and a longer axial Ni-O bond [2.1381 (17) Å]. The OPD ligand is located about an inversion center and is nearly coplanar with the NiN4 plane [dihedral angle 0.95 (9)°]. In the crystal, the cations and anions are connected by charge-assisted inter-molecular N-H⋯O and O-H⋯O hydrogen-bonding inter-actions into the tri-periodic network structure. Hirshfeld surface analysis indicates that the most important contributions to the crystal packing are from H⋯H (44.1%), O⋯H/H⋯O (34.3%), C⋯H/H⋯C (14.8%) C⋯C (6.5%) (involving the cations) and O⋯H/H⋯O (50%), H⋯H (25%), C⋯H/H⋯C (15.3%), C⋯C (8.2%) (involving the anions) inter-actions.

Triazole-Bridged Zinc Dinuclear Complexes: Mechanochemical Synthesis, Crystal Structure, and Biological Activity

Two zinc (Zn) complexes, [Zn₂(DAT)₂Cl₄] (I) and [Zn₂(DAT)₂(NO₃)₄] (II), were prepared by grinding 3,5-diamino-1,2,4-triazole (C₂H₅N₅, DAT) with Zn precursors such as ZnCl₂ and Zn(NO₃)₂, respectively. This solid-state reaction gives the corresponding Zn complex as the sole product in over 99% yield. This mechanochemical method promotes the selective formation of Zn complexes different from those obtained using the conventional solution-based route. The crystal structures of the two complexes were analyzed by single-crystal X-ray diffraction. Complex (I) crystallizes in the monoclinic space group P2₁/c, whereas complex (II) crystallizes in the triclinic space group P _1̅. Each complex is characterized by the presence of a characteristic DAT-bridged dimer with one DAT ligand per Zn atom, and the DAT ligand provides a bridge between the two Zn metals. All Zn centers of (I) and (II) adopted a slightly distorted tetrahedral geometry. Both complexes contain a hexanuclear Zn₂N₄ ring, but their ring structures are different. Complex (I) possesses a boat geometry, while complex (II) has a nearly planar structure. The Zn-bound chlorides of complex (I) form intermolecular N-H···Cl hydrogen bonds that link neighboring molecules. In complex (II), the O atoms in the nitrate groups are hydrogen-bonded to the DAT ligand via O···H-N linkages. Both complexes exhibit blue emissions in the solid state at ambient temperature. They were evaluated as anticancer agents in HeLa, NCCIT, and MCF-7 cancer cell lines, exhibiting promising anticancer activities.

Charge-assisted hydrogen bonding in three diaminobenzene salts

Hydrogen-bonding interactions play an important role in the rational design of crystal systems with desirable architectures. The crystal structures of benzene-1,2-diaminium sulfate sesquihydrate, C₆H₂₀N₂²⁺·SO₄^2-·1.5H₂O, (1), benzene-1,3-diaminium tetrachloridozincate(II), (C₆H₂₀N₂)[ZnCl₄], (3), and 3-aminoanilinium perchlorate, C₆H₉N₂⁺·ClO₄^-, (4), are reported. Hydrated salt (1) is a polymorph (space group C2/c) of a previously reported [Anderson et al. (2011). Cryst. Growth Des. 11, 4904-4919] crystalline modification of salt (2) (space group P2₁/c). The contents of the asymmetric unit of (2) are twice that of (1). In each, the extended structures exhibit hydrogen bonds, resulting in chains of ions and hydrogen-bonded rings with an R₄⁴(8) motif involving water molecules. Hirshfeld surface analysis shows that a significant difference between the two is the degree of C...C interaction. Salt (3) exhibits an extended structure having hydrogen-bonded rings and parallel benzene rings, with a centroid-to-centroid separation of 3.860 (2) Å. Salt (4) displays a three-dimensional superstructure that results from linked planes of ions joined by an extensive hydrogen-bonding network involving N-H...O, N-H...N and C-H...π interactions. The cation-anion and N-H...N interaction energies in (4), determined using density functional theory (DFT), show significantly stronger aminium-perchlorate than amine-perchlorate interactions.

Searching for stereoisomerism in crystallographic databases: algorithm, analysis and chiral curiosities

The automated identification of chiral centres in molecular residues is a non-trivial task. Current tools that allow the user to analyze crystallographic data entries do not identify chiral centres in some of the more complex ring structures, or lack the possibility to determine and compare the chirality of multiple structures. This article presents an approach to identify asymmetric C atoms, which is based on the atomic walk count algorithm presented by Rücker & Rücker [(1993), J. Chem. Inf. Comput. Sci. 33, 683-695]. The algorithm, which we implemented in a computer program named ChiChi, is able to compare isomeric residues based on the chiral centres that were identified. This allows for discrimination between enantiomers, diastereomers and constitutional isomers that are present in crystallographic databases. ChiChi was used to process 254 354 organic entries from the Cambridge Structural Database (CSD). A thorough analysis of stereoisomerism in the CSD is presented accompanied by a collection of chiral curiosities that illustrate the strength and versatility of this approach.

Two cadmium coordination polymers with bridging acetate and phenyl-enedi-amine ligands that exhibit two-dimensional layered structures

Poly[tetra-μ2-acetato-κ8O:O'-bis-(μ2-benzene-1,2-di-amine-κ2N:N')dicadmium], [Cd2(CH3COO)4(C6H8N2)2] n , (I), and poly[[(μ2-acetato-κ2O:O')(acetato-κ2O,O')(μ2-benzene-1,3-di-amine-κ2N:N')cadmium] hemihydrate], {[Cd(CH3COO)2(C6H8N2)]·0.5H2O} n , (II), have two-dimensional polymeric structures in which monomeric units are joined by bridging acetate and benzenedi-amine ligands. Each of the CdII ions has an O4N2 coordination environment. The coordination geometries of the symmetry-independent CdII ions are distorted octa-hedral and distorted trigonal anti-prismatic in (I) and distorted anti-prismatic in (II). Both compounds exhibit an intra-layer hydrogen-bonding network. In addition, the water of hydration in (II) is involved in inter-layer hydrogen bonding.