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He Z, Wong ANN, Yoo JS. Co-ERA-Net: Co-Supervision and Enhanced Region Attention for Accurate Segmentation in COVID-19 Chest Infection Images. Bioengineering (Basel) 2023; 10:928. [PMID: 37627813 PMCID: PMC10451793 DOI: 10.3390/bioengineering10080928] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2023] [Revised: 07/31/2023] [Accepted: 08/03/2023] [Indexed: 08/27/2023] Open
Abstract
Accurate segmentation of infected lesions in chest images remains a challenging task due to the lack of utilization of lung region information, which could serve as a strong location hint for infection. In this paper, we propose a novel segmentation network Co-ERA-Net for infections in chest images that leverages lung region information by enhancing supervised information and fusing multi-scale lung region and infection information at different levels. To achieve this, we introduce a Co-supervision scheme incorporating lung region information to guide the network to accurately locate infections within the lung region. Furthermore, we design an Enhanced Region Attention Module (ERAM) to highlight regions with a high probability of infection by incorporating infection information into the lung region information. The effectiveness of the proposed scheme is demonstrated using COVID-19 CT and X-ray datasets, with the results showing that the proposed schemes and modules are promising. Based on the baseline, the Co-supervision scheme, when integrated with lung region information, improves the Dice coefficient by 7.41% and 2.22%, and the IoU by 8.20% and 3.00% in CT and X-ray datasets respectively. Moreover, when this scheme is combined with the Enhanced Region Attention Module, the Dice coefficient sees further improvement of 14.24% and 2.97%, with the IoU increasing by 28.64% and 4.49% for the same datasets. In comparison with existing approaches across various datasets, our proposed method achieves better segmentation performance in all main metrics and exhibits the best generalization and comprehensive performance.
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Affiliation(s)
| | | | - Jung Sun Yoo
- Department of Health Technology and Informatics, The Hong Kong Polytechnic University, Kowloon, Hong Kong SAR, China; (Z.H.); (A.N.N.W.)
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Zhou X, Tong T, Zhong Z, Fan H, Li Z. Saliency-CCE: Exploiting colour contextual extractor and saliency-based biomedical image segmentation. Comput Biol Med 2023; 154:106551. [PMID: 36716685 DOI: 10.1016/j.compbiomed.2023.106551] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2022] [Revised: 01/03/2023] [Accepted: 01/11/2023] [Indexed: 01/21/2023]
Abstract
Biomedical image segmentation is one critical component in computer-aided system diagnosis. However, various non-automatic segmentation methods are usually designed to segment target objects with single-task driven, ignoring the potential contribution of multi-task, such as the salient object detection (SOD) task and the image segmentation task. In this paper, we propose a novel dual-task framework for white blood cell (WBC) and skin lesion (SL) saliency detection and segmentation in biomedical images, called Saliency-CCE. Saliency-CCE consists of a preprocessing of hair removal for skin lesions images, a novel colour contextual extractor (CCE) module for the SOD task and an improved adaptive threshold (AT) paradigm for the image segmentation task. In the SOD task, we perform the CCE module to extract hand-crafted features through a novel colour channel volume (CCV) block and a novel colour activation mapping (CAM) block. We first exploit the CCV block to generate a target object's region of interest (ROI). After that, we employ the CAM block to yield a refined salient map as the final salient map from the extracted ROI. We propose a novel adaptive threshold (AT) strategy in the segmentation task to automatically segment the WBC and SL from the final salient map. We evaluate our proposed Saliency-CCE on the ISIC-2016, the ISIC-2017, and the SCISC datasets, which outperform representative state-of-the-art SOD and biomedical image segmentation approaches. Our code is available at https://github.com/zxg3017/Saliency-CCE.
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Affiliation(s)
- Xiaogen Zhou
- Fujian Provincial Key Laboratory of Information Processing and Intelligent Control, Minjiang University, Fuzhou, P.R. China; College of Physics and Information Engineering, Fuzhou University, Fuzhou, P.R. China
| | - Tong Tong
- College of Physics and Information Engineering, Fuzhou University, Fuzhou, P.R. China
| | - Zhixiong Zhong
- Fujian Provincial Key Laboratory of Information Processing and Intelligent Control, Minjiang University, Fuzhou, P.R. China
| | - Haoyi Fan
- School of Computer and Artificial Intelligence, Zhengzhou University, Zhengzhou, P.R. China
| | - Zuoyong Li
- Fujian Provincial Key Laboratory of Information Processing and Intelligent Control, Minjiang University, Fuzhou, P.R. China.
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Rahman A, Ali H, Badshah N, Zakarya M, Hussain H, Rahman IU, Ahmed A, Haleem M. Power mean based image segmentation in the presence of noise. Sci Rep 2022; 12:21177. [PMID: 36477447 PMCID: PMC9729210 DOI: 10.1038/s41598-022-25250-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2021] [Accepted: 11/28/2022] [Indexed: 12/12/2022] Open
Abstract
In image segmentation and in general in image processing, noise and outliers distort contained information posing in this way a great challenge for accurate image segmentation results. To ensure a correct image segmentation in presence of noise and outliers, it is necessary to identify the outliers and isolate them during a denoising pre-processing or impose suitable constraints into a segmentation framework. In this paper, we impose suitable removing outliers constraints supported by a well-designed theory in a variational framework for accurate image segmentation. We investigate a novel approach based on the power mean function equipped with a well established theoretical base. The power mean function has the capability to distinguishes between true image pixels and outliers and, therefore, is robust against outliers. To deploy the novel image data term and to guaranteed unique segmentation results, a fuzzy-membership function is employed in the proposed energy functional. Based on qualitative and quantitative extensive analysis on various standard data sets, it has been observed that the proposed model works well in images having multi-objects with high noise and in images with intensity inhomogeneity in contrast with the latest and state-of-the-art models.
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Affiliation(s)
- Afzal Rahman
- Department of Mathematics, University of Peshawar, Peshawar, Pakistan
| | - Haider Ali
- Department of Mathematics, University of Peshawar, Peshawar, Pakistan
| | - Noor Badshah
- Department of Basic Sciences, University of Engineering and Technology Peshawar, Peshawar, Pakistan
| | - Muhammad Zakarya
- Department of Computer Science, Abdul Wali Khan University, Mardan, Pakistan
| | - Hameed Hussain
- Department of Computer Science, University of Buner, Buner, Pakistan
| | - Izaz Ur Rahman
- Department of Computer Science, Abdul Wali Khan University, Mardan, Pakistan
| | - Aftab Ahmed
- Department of Computer Science, Abdul Wali Khan University, Mardan, Pakistan
| | - Muhammad Haleem
- Department of Computer Science, Kardan University, Kabul, Afghanistan.
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Qi A, Zhao D, Yu F, Heidari AA, Wu Z, Cai Z, Alenezi F, Mansour RF, Chen H, Chen M. Directional mutation and crossover boosted ant colony optimization with application to COVID-19 X-ray image segmentation. Comput Biol Med 2022; 148:105810. [PMID: 35868049 PMCID: PMC9278012 DOI: 10.1016/j.compbiomed.2022.105810] [Citation(s) in RCA: 119] [Impact Index Per Article: 39.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2021] [Revised: 06/07/2022] [Accepted: 06/08/2022] [Indexed: 12/12/2022]
Abstract
This paper focuses on the study of Coronavirus Disease 2019 (COVID-19) X-ray image segmentation technology. We present a new multilevel image segmentation method based on the swarm intelligence algorithm (SIA) to enhance the image segmentation of COVID-19 X-rays. This paper first introduces an improved ant colony optimization algorithm, and later details the directional crossover (DX) and directional mutation (DM) strategy, XMACO. The DX strategy improves the quality of the population search, which enhances the convergence speed of the algorithm. The DM strategy increases the diversity of the population to jump out of the local optima (LO). Furthermore, we design the image segmentation model (MIS-XMACO) by incorporating two-dimensional (2D) histograms, 2D Kapur's entropy, and a nonlocal mean strategy, and we apply this model to COVID-19 X-ray image segmentation. Benchmark function experiments based on the IEEE CEC2014 and IEEE CEC2017 function sets demonstrate that XMACO has a faster convergence speed and higher convergence accuracy than competing models, and it can avoid falling into LO. Other SIAs and image segmentation models were used to ensure the validity of the experiments. The proposed MIS-XMACO model shows more stable and superior segmentation results than other models at different threshold levels by analyzing the experimental results.
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Affiliation(s)
- Ailiang Qi
- College of Computer Science and Technology, Changchun Normal University, Changchun, Jilin, 130032, China.
| | - Dong Zhao
- College of Computer Science and Technology, Changchun Normal University, Changchun, Jilin, 130032, China.
| | - Fanhua Yu
- College of Computer Science and Technology, Beihua University, Jilin, Jilin, 132013, China.
| | - Ali Asghar Heidari
- College of Computer Science and Artificial Intelligence, Wenzhou University, Wenzhou, Zhejiang, 325035, China.
| | - Zongda Wu
- Department of Computer Science and Engineering, Shaoxing University, Shaoxing, 312000, China.
| | - Zhennao Cai
- College of Computer Science and Artificial Intelligence, Wenzhou University, Wenzhou, Zhejiang, 325035, China.
| | - Fayadh Alenezi
- Department of Electrical Engineering, College of Engineering, Jouf University, Saudi Arabia.
| | - Romany F Mansour
- Department of Mathematics, Faculty of Science, New Valley University, El-Kharga, 72511, Egypt.
| | - Huiling Chen
- College of Computer Science and Artificial Intelligence, Wenzhou University, Wenzhou, Zhejiang, 325035, China.
| | - Mayun Chen
- Department of Pulmonary and Critical Care Medicine, The First Affiliated Hospital of Wenzhou Medical University, Wenzhou, 325000, China.
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Prabhakara N, Anandha Pr S, Kamali M, Sabarinath C, Chandra I, Prabhu V. Predictive Analysis of COVID-19 Symptoms with CXR Imaging and Optimize the X-Ray Imaging Using Segmentation Thresholding Algorithm-An Evolutionary Approach for Bio-Medical Diagnosis. INT J PHARMACOL 2022. [DOI: 10.3923/ijp.2022.644.656] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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D. Algarni A, El-Shafai W, M. El Banby G, E. Abd El-Samie F, F. Soliman N. An Efficient CNN-Based Hybrid Classification and Segmentation Approach for COVID-19 Detection. COMPUTERS, MATERIALS & CONTINUA 2022; 70:4393-4410. [DOI: 10.32604/cmc.2022.020265] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2021] [Accepted: 06/29/2021] [Indexed: 09/02/2023]
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Joseph S, Olugbara OO. Detecting Salient Image Objects Using Color Histogram Clustering for Region Granularity. J Imaging 2021; 7:187. [PMID: 34564113 PMCID: PMC8466031 DOI: 10.3390/jimaging7090187] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2021] [Revised: 09/02/2021] [Accepted: 09/13/2021] [Indexed: 11/25/2022] Open
Abstract
Salient object detection represents a novel preprocessing stage of many practical image applications in the discipline of computer vision. Saliency detection is generally a complex process to copycat the human vision system in the processing of color images. It is a convoluted process because of the existence of countless properties inherent in color images that can hamper performance. Due to diversified color image properties, a method that is appropriate for one category of images may not necessarily be suitable for others. The selection of image abstraction is a decisive preprocessing step in saliency computation and region-based image abstraction has become popular because of its computational efficiency and robustness. However, the performances of the existing region-based salient object detection methods are extremely hooked on the selection of an optimal region granularity. The incorrect selection of region granularity is potentially prone to under- or over-segmentation of color images, which can lead to a non-uniform highlighting of salient objects. In this study, the method of color histogram clustering was utilized to automatically determine suitable homogenous regions in an image. Region saliency score was computed as a function of color contrast, contrast ratio, spatial feature, and center prior. Morphological operations were ultimately performed to eliminate the undesirable artifacts that may be present at the saliency detection stage. Thus, we have introduced a novel, simple, robust, and computationally efficient color histogram clustering method that agglutinates color contrast, contrast ratio, spatial feature, and center prior for detecting salient objects in color images. Experimental validation with different categories of images selected from eight benchmarked corpora has indicated that the proposed method outperforms 30 bottom-up non-deep learning and seven top-down deep learning salient object detection methods based on the standard performance metrics.
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Affiliation(s)
| | - Oludayo O. Olugbara
- Department of Information Technology, Durban University of Technology, Durban 4000, South Africa;
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Liu S, Yu S, Zhao Y, Tao Z, Yu H, Jin L. Salient Region Guided Blind Image Sharpness Assessment. SENSORS (BASEL, SWITZERLAND) 2021; 21:3963. [PMID: 34201384 PMCID: PMC8229120 DOI: 10.3390/s21123963] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/04/2021] [Revised: 05/31/2021] [Accepted: 06/04/2021] [Indexed: 11/17/2022]
Abstract
Salient regions provide important cues for scene understanding to the human vision system. However, whether the detected salient regions are helpful in image blur estimation is unknown. In this study, a salient region guided blind image sharpness assessment (BISA) framework is proposed, and the effect of the detected salient regions on the BISA performance is investigated. Specifically, three salient region detection (SRD) methods and ten BISA models are jointly explored, during which the output saliency maps from SRD methods are re-organized as the input of BISA models. Consequently, the change in BISA metric values can be quantified and then directly related to the difference in BISA model inputs. Finally, experiments are conducted on three Gaussian blurring image databases, and the BISA prediction performance is evaluated. The comparison results indicate that salient region input can help achieve a close and sometimes superior performance to a BISA model over the whole image input. When using the center region input as the baseline, the detected salient regions from the saliency optimization from robust background detection (SORBD) method lead to consistently better score prediction, regardless of the BISA model. Based on the proposed hybrid framework, this study reveals that saliency detection benefits image blur estimation, while how to properly incorporate SRD methods and BISA models to improve the score prediction will be explored in our future work.
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Affiliation(s)
- Siqi Liu
- Key Laboratory of Convergent Media and Intelligent Technology (Communication University of China), Ministry of Education, Beijing 100024, China; (S.L.); (S.Y.); (Y.Z.); (Z.T.)
- School of Information and Communication Engineering, Communication University of China, Beijing 100024, China
| | - Shaode Yu
- Key Laboratory of Convergent Media and Intelligent Technology (Communication University of China), Ministry of Education, Beijing 100024, China; (S.L.); (S.Y.); (Y.Z.); (Z.T.)
- School of Information and Communication Engineering, Communication University of China, Beijing 100024, China
| | - Yanming Zhao
- Key Laboratory of Convergent Media and Intelligent Technology (Communication University of China), Ministry of Education, Beijing 100024, China; (S.L.); (S.Y.); (Y.Z.); (Z.T.)
- School of Information and Communication Engineering, Communication University of China, Beijing 100024, China
| | - Zhulin Tao
- Key Laboratory of Convergent Media and Intelligent Technology (Communication University of China), Ministry of Education, Beijing 100024, China; (S.L.); (S.Y.); (Y.Z.); (Z.T.)
- School of Information and Communication Engineering, Communication University of China, Beijing 100024, China
| | - Hang Yu
- School of Aerospace Science and Technology, Xidian University, Xi’an 710126, China;
| | - Libiao Jin
- Key Laboratory of Convergent Media and Intelligent Technology (Communication University of China), Ministry of Education, Beijing 100024, China; (S.L.); (S.Y.); (Y.Z.); (Z.T.)
- School of Information and Communication Engineering, Communication University of China, Beijing 100024, China
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