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Xue Z, Angara S, Guo P, Rajaraman S, Jeronimo J, Rodriguez AC, Alfaro K, Charoenkwan K, Mungo C, Domgue JF, Wentzensen N, Desai KT, Ajenifuja KO, Wikström E, Befano B, de Sanjosé S, Schiffman M, Antani S. Image Quality Classification for Automated Visual Evaluation of Cervical Precancer. MEDICAL IMAGE LEARNING WITH LIMITED AND NOISY DATA : FIRST INTERNATIONAL WORKSHOP, MILLAND 2022, HELD IN CONJUNCTION WITH MICCAI 2022, SINGAPORE, SEPTEMBER 22, 2022, PROCEEDINGS. MILLAND (WORKSHOP) (1ST : 2022 : SINGAPORE) 2022; 13559:206-217. [PMID: 36315110 PMCID: PMC9614805 DOI: 10.1007/978-3-031-16760-7_20] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
Abstract
Image quality control is a critical element in the process of data collection and cleaning. Both manual and automated analyses alike are adversely impacted by bad quality data. There are several factors that can degrade image quality and, correspondingly, there are many approaches to mitigate their negative impact. In this paper, we address image quality control toward our goal of improving the performance of automated visual evaluation (AVE) for cervical precancer screening. Specifically, we report efforts made toward classifying images into four quality categories ("unusable", "unsatisfactory", "limited", and "evaluable") and improving the quality classification performance by automatically identifying mislabeled and overly ambiguous images. The proposed new deep learning ensemble framework is an integration of several networks that consists of three main components: cervix detection, mislabel identification, and quality classification. We evaluated our method using a large dataset that comprises 87,420 images obtained from 14,183 patients through several cervical cancer studies conducted by different providers using different imaging devices in different geographic regions worldwide. The proposed ensemble approach achieved higher performance than the baseline approaches.
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Affiliation(s)
- Zhiyun Xue
- National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA
| | - Sandeep Angara
- National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA
| | - Peng Guo
- National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA
| | | | - Jose Jeronimo
- National Cancer Institute, National Institutes of Health, Rockville, MD 20850, USA
| | | | | | - Kittipat Charoenkwan
- Department of Obstetrics and Gynecology, Chiang Mai University, Chiang Mai, Thailand 50200
| | - Chemtai Mungo
- Department of Obstetrics and Gynecology, University of North Carolina-Chapel Hill School of Medicine, Chapel Hill, NC, USA
| | - Joel Fokom Domgue
- Cameroon Baptist Convention Health Services, Bamenda, North West Region, Cameroon
- Department of Obstetrics and Gynecology, Faculty of Medicine and Biomedical Sciences, University of Yaoundé, Yaoundé, Cameroon
- Department of Epidemiology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA
| | - Nicolas Wentzensen
- National Cancer Institute, National Institutes of Health, Rockville, MD 20850, USA
| | - Kanan T Desai
- National Cancer Institute, National Institutes of Health, Rockville, MD 20850, USA
| | | | - Elisabeth Wikström
- Department of Women's and Children's Health, Karolinska Institutet, Stockholm, Sweden
| | - Brian Befano
- Information Management Services, Calverton, MD, USA
| | - Silvia de Sanjosé
- National Cancer Institute, National Institutes of Health, Rockville, MD 20850, USA
| | - Mark Schiffman
- National Cancer Institute, National Institutes of Health, Rockville, MD 20850, USA
| | - Sameer Antani
- National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA
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Jeong JJ, Tariq A, Adejumo T, Trivedi H, Gichoya JW, Banerjee I. Systematic Review of Generative Adversarial Networks (GANs) for Medical Image Classification and Segmentation. J Digit Imaging 2022; 35:137-152. [PMID: 35022924 PMCID: PMC8921387 DOI: 10.1007/s10278-021-00556-w] [Citation(s) in RCA: 38] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2021] [Revised: 11/23/2021] [Accepted: 11/26/2021] [Indexed: 11/28/2022] Open
Abstract
In recent years, generative adversarial networks (GANs) have gained tremendous popularity for various imaging related tasks such as artificial image generation to support AI training. GANs are especially useful for medical imaging-related tasks where training datasets are usually limited in size and heavily imbalanced against the diseased class. We present a systematic review, following the PRISMA guidelines, of recent GAN architectures used for medical image analysis to help the readers in making an informed decision before employing GANs in developing medical image classification and segmentation models. We have extracted 54 papers that highlight the capabilities and application of GANs in medical imaging from January 2015 to August 2020 and inclusion criteria for meta-analysis. Our results show four main architectures of GAN that are used for segmentation or classification in medical imaging. We provide a comprehensive overview of recent trends in the application of GANs in clinical diagnosis through medical image segmentation and classification and ultimately share experiences for task-based GAN implementations.
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Affiliation(s)
- Jiwoong J Jeong
- Department of Biomedical Informatics, Emory School of Medicine, Atlanta, USA.
| | - Amara Tariq
- Department of Biomedical Informatics, Emory School of Medicine, Atlanta, USA
| | | | - Hari Trivedi
- Department of Radiology, Emory School of Medicine, Atlanta, USA
| | - Judy W Gichoya
- Department of Radiology, Emory School of Medicine, Atlanta, USA
| | - Imon Banerjee
- Department of Biomedical Informatics, Emory School of Medicine, Atlanta, USA.,Department of Radiology, Emory School of Medicine, Atlanta, USA
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