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Vimal R, Kumar A, Tiwari A. A new VCG signal compression technique based on discrete Karhunen-Loeve expansion and tunable quality wavelet transform. J Electrocardiol 2025; 89:153894. [PMID: 39946948 DOI: 10.1016/j.jelectrocard.2025.153894] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2024] [Revised: 01/19/2025] [Accepted: 01/23/2025] [Indexed: 03/17/2025]
Abstract
This paper presents a novel two-stage compression technique for vectorcardiogram (VCG) signals, combining Discrete Karhunen-Loeve (K-L) Expansion and Tunable Q-Factor Wavelet Transform (TQWT). In the first stage, VCG signals undergo discrete K-L expansion and a secondary rotation to reduce variance caused by physiological factors, such as respiration and varying heart orientations among patients. This process effectively simplifies the dataset by leveraging eigenvector-based transformation, while standardizing the data across different VCG records. In the second stage, the standardized data is processed using TQWT, with finely tuned parameters (Q-factor of 4, redundancy factor of 1.2, and 6 stages), followed by quantization and Run-Length Encoding (RLE). The RLE method efficiently compresses the long sequences of zeros generated during the process, further enhancing the data reduction. The proposed method was rigorously evaluated using the PTB Diagnostic ECG Database, demonstrating remarkable compression efficiency. When compared with standard approaches like Discrete K-L Transform and Discrete Cosine Transform (DCT), the method achieved a superior average compression ratio of 15.43. Key evaluation metrics further highlight its efficacy, including an average Percent Root Difference (PRD) of 7.39 %, Fidelity of 99.72 %, Peak Signal-to-Noise Ratio (PSNR) of 37.38 dB, and a Quality Score (QS) of 2.13 %. Moreover, the method's rapid processing speed of 0.076 s per record makes it well-suited for real-time applications. This innovative approach provides an effective solution for VCG signal compression, enhancing the storage and transmission efficiency, while preserving high signal fidelity for clinical use.
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Affiliation(s)
- Ronak Vimal
- PDPM-Indian Institute of Information Technology Design and Manufacturing, Jabalpur 482005, M.P, India
| | - A Kumar
- PDPM-Indian Institute of Information Technology Design and Manufacturing, Jabalpur 482005, M.P, India.
| | - Aditya Tiwari
- PDPM-Indian Institute of Information Technology Design and Manufacturing, Jabalpur 482005, M.P, India
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2
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Khan AA, Kim JH. Recent advances in materials and manufacturing of implantable devices for continuous health monitoring. Biosens Bioelectron 2024; 261:116461. [PMID: 38850737 DOI: 10.1016/j.bios.2024.116461] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/29/2024] [Revised: 04/30/2024] [Accepted: 06/01/2024] [Indexed: 06/10/2024]
Abstract
Implantable devices are vital in healthcare, enabling continuous monitoring, early disease detection, informed decision-making, enhanced outcomes, cost reduction, and chronic condition management. These devices provide real-time data, allowing proactive healthcare interventions, and contribute to overall improvements in patient care and quality of life. The success of implantable devices relies on the careful selection of materials and manufacturing methods. Recent materials research and manufacturing advancements have yielded implantable devices with enhanced biocompatibility, reliability, and functionality, benefiting human healthcare. This paper provides a comprehensive overview of the latest developments in implantable medical devices, emphasizing the importance of material selection and manufacturing methods, including biocompatibility, self-healing capabilities, corrosion resistance, mechanical properties, and conductivity. It explores various manufacturing techniques such as microfabrication, 3D printing, laser micromachining, electrospinning, screen printing, inkjet printing, and nanofabrication. The paper also discusses challenges and limitations in the field, including biocompatibility concerns, privacy and data security issues, and regulatory hurdles for implantable devices.
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Affiliation(s)
- Akib Abdullah Khan
- School of Engineering and Computer Science, Washington State University, Vancouver, WA, 98686, USA
| | - Jong-Hoon Kim
- School of Engineering and Computer Science, Washington State University, Vancouver, WA, 98686, USA; Department of Mechanical Engineering, University of Washington, WA, 98195, USA.
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Pal HS, Kumar A, Vishwakarma A, Lee HN. Electrocardiogram signal compression using adaptive tunable-Q wavelet transform and modified dead-zone quantizer. ISA TRANSACTIONS 2023; 142:335-346. [PMID: 37524624 DOI: 10.1016/j.isatra.2023.07.033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2022] [Revised: 05/27/2023] [Accepted: 07/21/2023] [Indexed: 08/02/2023]
Abstract
The electrocardiogram (ECG) signals are commonly used to identify heart complications. These recordings generate large data that needed to be stored or transferred in telemedicine applications, which require more storage space and bandwidth. Therefore, a strong motivation is present to develop efficient compression algorithms for ECG signals. In the above context, this work proposes a novel compression algorithm using adaptive tunable-Q wavelet transform (TQWT) and modified dead-zone quantizer (DZQ). The parameters of TQWT and threshold values of DZQ are selected using the proposed Sparse-grey wolf optimization (Sparse-GWO) algorithm. The Sparse-GWO is proposed in this work to reduce the computation time of the original GWO. Moreover, it is also compared with some popular algorithms such as original GWO, particle swarm optimization (PSO), Hybrid PSOGWO, and Sparse-PSO. The DZQ has been utilized to perform thresholding and quantization. Then, run-length encoding (RLE) has been used to encode the quantized coefficients. The proposed work has been performed on the MIT-BIH arrhythmia database. Quality assessment performed on reconstructed signals ensure the minimal impact of compression on the morphology of reconstructed ECG signals. The compression performance of proposed algorithm is measured in terms of the following evaluation matrices: percent root-mean-square difference (PRD1), compression ratio (CR), signal-to-noise ratio (SNR), and quality score (QS1). The obtained average values are 3.21%, 20.56, 30.62 dB, and 7.79, respectively.
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Affiliation(s)
- Hardev Singh Pal
- Discipline of Electronics and Communication Engineering, PDPM Indian Institute ofInformation Technology, Design and Manufacturing Jabalpur, Jabalpur 482005, India.
| | - A Kumar
- Discipline of Electronics and Communication Engineering, PDPM Indian Institute ofInformation Technology, Design and Manufacturing Jabalpur, Jabalpur 482005, India.
| | - Amit Vishwakarma
- Discipline of Electronics and Communication Engineering, PDPM Indian Institute ofInformation Technology, Design and Manufacturing Jabalpur, Jabalpur 482005, India.
| | - Heung-No Lee
- School of Electrical Engineering and Computer Science, Gwangju Institute of Science and Technology, Gwangju 500712, Republic of Korea.
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Ahmadzadeh S. Study of Energy-Efficient Biomedical Data Compression Methods in the Wireless Body Area Networks (WBANs) and Remote Healthcare Networks. INTERNATIONAL JOURNAL OF WIRELESS INFORMATION NETWORKS 2023; 30:252-269. [DOI: 10.1007/s10776-023-00599-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2020] [Revised: 02/15/2023] [Accepted: 06/29/2023] [Indexed: 01/05/2025]
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5
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Pandey A. ECG data compression using the formation of QRS-complex segment bank and integer DCT-based plateau region processing. Biomed Signal Process Control 2023. [DOI: 10.1016/j.bspc.2023.104823] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/22/2023]
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Al-Barzinji SM, Al-din MNS, Abdulbaqi AS, Bhushan B, Obaid AJ. A Brain Seizure Diagnosing Remotely Based on EEG Signal Compression and Encryption: A Step for Telehealth. EAI/SPRINGER INNOVATIONS IN COMMUNICATION AND COMPUTING 2023:211-225. [DOI: 10.1007/978-3-031-23602-0_13] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/04/2025]
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Song L, Wang H, Shi Z. A Literature Review Research on Monitoring Conditions of Mechanical Equipment Based on Edge Computing. Appl Bionics Biomech 2022; 2022:9489306. [PMID: 36254227 PMCID: PMC9569220 DOI: 10.1155/2022/9489306] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2022] [Revised: 09/01/2022] [Accepted: 09/05/2022] [Indexed: 11/25/2022] Open
Abstract
The motivation of this research is to review all methods used in data compression of collected data in monitoring the condition of equipment based on the framework of edge computing. Since a large amount of signal data is collected when monitoring conditions of mechanical equipment, namely, signals of running machines are continuously transmitted to be crunched, compressed data should be handled effectively. However, this process occupies resources since data transmission requires the allocation of a large capacity. To resolve this problem, this article examines the monitoring conditions of equipment based on edge computing. First, the signal is pre-processed by edge computing, so that the fault characteristics can be identified quickly. Second, signals with difficult-to-identify fault characteristics need to be compressed to save transmission resources. Then, different types of signal data collected in mechanical equipment conditions are compressed by various compression methods and uploaded to the cloud. Finally, the cloud platform, which has powerful processing capability, is processed to improve the volume of the data transmission. By examining and analyzing the monitoring conditions and signal compression methods of mechanical equipment, the future development trend is elaborated to provide references and ideas for the contemporary research of data monitoring and data compression algorithms. Consequently, the manuscript presents different compression methods in detail and clarifies the data compression methods used for the signal compression of equipment based on edge computing.
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Affiliation(s)
- Liqiang Song
- Department of Vehicle and Electrical Engineering, Shijiazhuang Campus, Army Engineering University of PLA, Shijiazhuang 050003, China
| | - Huaiguang Wang
- Department of Vehicle and Electrical Engineering, Shijiazhuang Campus, Army Engineering University of PLA, Shijiazhuang 050003, China
| | - Zhiyong Shi
- Department of Vehicle and Electrical Engineering, Shijiazhuang Campus, Army Engineering University of PLA, Shijiazhuang 050003, China
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Electrocardiogram signal compression using tunable-Q wavelet transform and meta-heuristic optimization techniques. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2022.103932] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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9
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ABIDE: A Novel Scheme for Ultrasonic Echo Estimation by Combining CEEMD-SSWT Method with EM Algorithm. SUSTAINABILITY 2022. [DOI: 10.3390/su14041960] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/10/2022]
Abstract
Ultrasonic echo estimation has played an important role in industrial non-destructive testing and analysis. The ability to estimate parameters in the ultrasonic echo model is crucial to ensure the effectiveness of practical ultrasonic testing applications. In this paper, a scheme called ABIDE for identifying both multiple noises in the echo signal and the distribution of the denoised signal is proposed for ultrasonic echo signal parameter estimation. ABIDE integrates complementary ensemble empirical mode decomposition and the synchrosqueezed wavelet transform (CEEMD-SSWT) as well as the expectation maximization (EM) algorithm. The echo signal is split into a series of IMF components and a residual with the help of CEEMD, and then these IMFs are classified into the noise-dominant part and signal-dominant part by analyzing the correlation of each IMF and the echo signal using grey relational analysis. Considering the effect of noise in the signal-dominant part, SSWT is adopted to remove the noise in the signal-dominant part. Lastly, the signal output by the SSWT algorithm is used for reconstructing a denoised signal combined with the residual from CEEMD. Considering the distribution characteristic of the denoised signal, the EM algorithm is used to estimate parameters in the ultrasonic echo model. The relative performance of the proposed scheme was evaluated on synthetic data and real-world data and then compared with the state-of-the-art methods. Simulation results on synthetic data show that ABIDE outperforms the state-of-the-art methods in parameter estimation. Physical results on real-world data show that the proposed scheme has a greater PCC value in estimating echo model parameters. This paper also shows that ABIDE requires less convergence time than competitive methods.
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Arrhythmia detection and classification using ECG and PPG techniques: a review. Phys Eng Sci Med 2021; 44:1027-1048. [PMID: 34727361 DOI: 10.1007/s13246-021-01072-5] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2021] [Accepted: 10/25/2021] [Indexed: 12/26/2022]
Abstract
Electrocardiogram (ECG) and photoplethysmograph (PPG) are non-invasive techniques that provide electrical and hemodynamic information of the heart, respectively. This information is advantageous in the diagnosis of various cardiac abnormalities. Arrhythmia is the most common cardiovascular disease, manifested as single or multiple irregular heartbeats. However, due to the continuous manual observation, it becomes troublesome for experts sometimes to identify the paroxysmal nature of arrhythmia correctly. Moreover, due to advancements in technology, there is an inclination towards wearable sensors which monitor such patients continuously. Thus, there is a need for automatic detection techniques for the identification of arrhythmia. In the presented work, ECG and PPG-based state-of-the-art methods have been described, including preprocessing, feature extraction, and classification techniques for the detection of various arrhythmias. Additionally, this review exhibits various wearable sensors used in the literature and public databases available for the evaluation of results. The study also highlights the limitations of the current techniques and pragmatic solutions to improvise the ongoing effort.
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Wang J, Li J, Jin H, Chen X. A Novel Lossless ECG Compression Algorithm for Active Implants . ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2021; 2021:3471-3474. [PMID: 34891987 DOI: 10.1109/embc46164.2021.9630251] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
A low complexity lossless ECG compression algorithm for active implants is proposed in this paper. The algorithm is based on adaptive length encoding by combining linear prediction with delta encoding. The algorithm is tested on forty-eight segments of 30-min ECG signals obtained from MIT-BIH Arrhythmia Database. The results show that with the data segment length of 33 and the predictor order of 2, the average compression rate of the algorithm reaches 2.43 and there is no difference between the reconstructed signal and the original one. It implies that it can realize the lossless compression with a high compression ratio. Meanwhile, the low complexity makes this novel algorithm suitable for ECG monitoring applications of active implants.
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Zhang H, Dong Z, Sun M, Gu H, Wang Z. TP-CNN: A Detection Method for atrial fibrillation based on transposed projection signals with compressed sensed ECG. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2021; 210:106358. [PMID: 34478912 DOI: 10.1016/j.cmpb.2021.106358] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2021] [Accepted: 08/11/2021] [Indexed: 06/13/2023]
Abstract
BACKGROUND AND OBJECTIVE Atrial fibrillation (AF) is the most prevalent arrhythmia, which increases the mortality of several complications. The use of wearable devices to detect atrial fibrillation is currently attracting a great deal of attention. Patients use wearable devices to continuously collect individual ECG signals and transmit them to the cloud for diagnosis. However, the ECG acquisition and transmission of wearable devices consumes a lot of energy. In order to solve this problem, some scholars have skipped the complex reconstruction process of compressed ECG signals and directly classified the compressed ECG signals, but the AF recognition rate is not high by this method. There is no explanation as to why the compressed ECG signals can be used for AF detection. METHODS Firstly, a simple deterministic measurement matrix (SDMM) is used to perform random projection operation on the ECG signals to complete the compression. Then, we use the transpose of the SDMM to perform transpose projection operation on the compressed signals in the cloud to obtain the approximate signals. We verify the similarity between the approximate ECG signal and the original ECG signal to explain why the compressed ECG signals are effective in AF detection. Finally, the Transposed Projection - Convolutional Neural Network (TP-CNN) is used to effectively detect AF on the obtained approximate ECG signals. Our proposed method is validated in the MIT-BIH AFDB. RESULTS The experimental results show that when compression ratios (CRs) are from 2 to 10, the average Pearson correlation coefficients between the approximate signals and the original signals are from 0.9867 to 0.8326, the average cosine similarities between the four frequency domain-based HRV features (including mean RR, RMSSD, SDNN and R density) are from 1.00 to 0.9958, from 1.00 to 0.9959, from 0.9978 to 0.8619 and from 0.9982 to 0.8707, respectively. Furthermore, when CR=10 (ECG was compressed to 1/10 of the original signal), the accuracy, specificity, f1 score and matthews correlation coefficient for AF detection of approximate signals were 99.32%, 99.43%, 99.14% and 98.57%, respectively. CONCLUSION Our proposed method illustrates the approximate signals have significant characteristics of the original signals and they are valid to classify the approximate signals. Meanwhile, comparing with the state-of-the-art methods, TP-CNN exceeded the results of the method for compressed signals and were also competitive compared with the classification results of the original signals, and is a promising method for AF detection in wearable application scenarios.
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Affiliation(s)
- Hongpo Zhang
- State Key Laboratory of Mathematical Engineering and Advanced Computing, Zhengzhou, Henan 450001, China; Cooperative Innovation Center of Internet Healthcare, Zhengzhou University, Zhengzhou, Henan 450001, China.
| | - Zhongren Dong
- Cooperative Innovation Center of Internet Healthcare, Zhengzhou University, Zhengzhou, Henan 450001, China; School of Information Engineering, Zhengzhou University, Zhengzhou, Henan 450001, China.
| | - Mengya Sun
- Cooperative Innovation Center of Internet Healthcare, Zhengzhou University, Zhengzhou, Henan 450001, China; School of Information Engineering, Zhengzhou University, Zhengzhou, Henan 450001, China.
| | - Hongzhuang Gu
- Cooperative Innovation Center of Internet Healthcare, Zhengzhou University, Zhengzhou, Henan 450001, China; School of Information Engineering, Zhengzhou University, Zhengzhou, Henan 450001, China.
| | - Zongmin Wang
- Cooperative Innovation Center of Internet Healthcare, Zhengzhou University, Zhengzhou, Henan 450001, China.
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Kolekar M, Jha C, Kumar P. ECG Data Compression Using Modified Run Length Encoding of Wavelet Coefficients for Holter Monitoring. Ing Rech Biomed 2021. [DOI: 10.1016/j.irbm.2021.10.001] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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14
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Zhang H, Dong Z, Wang Z, Guo L, Wang Z. CSNet: A deep learning approach for ECG compressed sensing. Biomed Signal Process Control 2021. [DOI: 10.1016/j.bspc.2021.103065] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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15
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Černá D, Rebollo-Neira L. Construction of wavelet dictionaries for ECG modeling. MethodsX 2021; 8:101314. [PMID: 34434834 PMCID: PMC8374259 DOI: 10.1016/j.mex.2021.101314] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2020] [Accepted: 03/15/2021] [Indexed: 12/04/2022] Open
Abstract
Technical details, algorithms, and MATLAB implementation for a method advanced in the paper ``Wavelet Based Dictionaries for Dimensionality Reduction of ECG Signals'', are presented. This work aims to be the companion of that publication, in which an adaptive mathematical model for a given ECG record is proposed. The method comprises the following building blocks.Construction of a suitable redundant set, called 'dictionary', for decomposing an ECG signal as a superposition of elementary components, called 'atoms', selected from that dictionary. Implementation of the greedy strategy Optimized Orthogonal Matching Pursuit (OOMP) for selecting the atoms intervening in the signal decomposition. This paper gives the details of the algorithms for implementing stage (i), which is not fully elaborated in the previous publication. The proposed dictionaries are constructed from known wavelet families, but translating the prototypes with a shorter step than that corresponding to a wavelet basis. Stage (ii) is readily implementable by the available function OOMP.The use of the software and the power of the technique is illustrated by reducing the dimensionality of ECG records taken from the MIT-BIH Arrhythmia Database. The MATLAB software has been made publicly available on a dedicated website. We provide the explanations, algorithms and software for the construction of scaling functions and wavelet prototypes for 17 different wavelet families. The procedure is designed to allow for straightforward extension of the software by the inclusion of additional options for the wavelet families.
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Affiliation(s)
- Dana Černá
- Department of Mathematics and Didactics of Mathematics, Technical University of Liberec, Studentská 2, Liberec, Czech Republic
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Chandra' S, Sharma A, Singh G. A Comparative Analysis of Performance of Several Wavelet Based ECG Data Compression Methodologies. Ing Rech Biomed 2021. [DOI: 10.1016/j.irbm.2020.05.004] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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17
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Chen SY, Lin SJ, Tsai MC, Tsai MD, Tang YJ, Chen ST, Wang LH. Patient Confidential Information Transmission Using the Integration of PSO-Based Biomedical Signal Steganography and Threshold-Based Compression. J Med Biol Eng 2021. [DOI: 10.1007/s40846-021-00641-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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18
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Jha C, Kolekar M. Electrocardiogram Data Compression Techniques for Cardiac Healthcare Systems: A Methodological Review. Ing Rech Biomed 2021. [DOI: 10.1016/j.irbm.2021.06.007] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Nemcova A, Smisek R, Vitek M, Novakova M. Pathologies affect the performance of ECG signals compression. Sci Rep 2021; 11:10514. [PMID: 34006955 PMCID: PMC8131635 DOI: 10.1038/s41598-021-89817-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2020] [Accepted: 04/29/2021] [Indexed: 11/09/2022] Open
Abstract
The performance of ECG signals compression is influenced by many things. However, there is not a single study primarily focused on the possible effects of ECG pathologies on the performance of compression algorithms. This study evaluates whether the pathologies present in ECG signals affect the efficiency and quality of compression. Single-cycle fractal-based compression algorithm and compression algorithm based on combination of wavelet transform and set partitioning in hierarchical trees are used to compress 125 15-leads ECG signals from CSE database. Rhythm and morphology of these signals are newly annotated as physiological or pathological. The compression performance results are statistically evaluated. Using both compression algorithms, physiological signals are compressed with better quality than pathological signals according to 8 and 9 out of 12 quality metrics, respectively. Moreover, it was statistically proven that pathological signals were compressed with lower efficiency than physiological signals. Signals with physiological rhythm and physiological morphology were compressed with the best quality. The worst results reported the group of signals with pathological rhythm and pathological morphology. This study is the first one which deals with effects of ECG pathologies on the performance of compression algorithms. Signal-by-signal rhythm and morphology annotations (physiological/pathological) for the CSE database are newly published.
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Affiliation(s)
- Andrea Nemcova
- Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Technická 12, 616 00, Brno, Czech Republic.
| | - Radovan Smisek
- Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Technická 12, 616 00, Brno, Czech Republic.,Institute of Scientific Instruments, The Czech Academy of Sciences, Královopolská 147, 612 64, Brno, Czech Republic
| | - Martin Vitek
- Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Technická 12, 616 00, Brno, Czech Republic
| | - Marie Novakova
- Department of Physiology, Faculty of Medicine, Masaryk University, Kamenice 753/5, 625 00, Brno, Czech Republic.,International Clinical Research Center, St. Anne's University Hospital Brno, Pekařská 53, 656 91, Brno, Czech Republic
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Jha CK, Kolekar MH. Tunable Q-wavelet based ECG data compression with validation using cardiac arrhythmia patterns. Biomed Signal Process Control 2021. [DOI: 10.1016/j.bspc.2021.102464] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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21
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22
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Bent B, Lu B, Kim J, Dunn JP. Biosignal Compression Toolbox for Digital Biomarker Discovery. SENSORS (BASEL, SWITZERLAND) 2021; 21:E516. [PMID: 33450898 PMCID: PMC7828339 DOI: 10.3390/s21020516] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/08/2020] [Revised: 01/07/2021] [Accepted: 01/11/2021] [Indexed: 12/26/2022]
Abstract
A critical challenge to using longitudinal wearable sensor biosignal data for healthcare applications and digital biomarker development is the exacerbation of the healthcare "data deluge," leading to new data storage and organization challenges and costs. Data aggregation, sampling rate minimization, and effective data compression are all methods for consolidating wearable sensor data to reduce data volumes. There has been limited research on appropriate, effective, and efficient data compression methods for biosignal data. Here, we examine the application of different data compression pipelines built using combinations of algorithmic- and encoding-based methods to biosignal data from wearable sensors and explore how these implementations affect data recoverability and storage footprint. Algorithmic methods tested include singular value decomposition, the discrete cosine transform, and the biorthogonal discrete wavelet transform. Encoding methods tested include run-length encoding and Huffman encoding. We apply these methods to common wearable sensor data, including electrocardiogram (ECG), photoplethysmography (PPG), accelerometry, electrodermal activity (EDA), and skin temperature measurements. Of the methods examined in this study and in line with the characteristics of the different data types, we recommend direct data compression with Huffman encoding for ECG, and PPG, singular value decomposition with Huffman encoding for EDA and accelerometry, and the biorthogonal discrete wavelet transform with Huffman encoding for skin temperature to maximize data recoverability after compression. We also report the best methods for maximizing the compression ratio. Finally, we develop and document open-source code and data for each compression method tested here, which can be accessed through the Digital Biomarker Discovery Pipeline as the "Biosignal Data Compression Toolbox," an open-source, accessible software platform for compressing biosignal data.
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Affiliation(s)
- Brinnae Bent
- Department of Biomedical Engineering, Duke University, Durham, NC 27708, USA; (B.B.); (B.L.); (J.K.)
| | - Baiying Lu
- Department of Biomedical Engineering, Duke University, Durham, NC 27708, USA; (B.B.); (B.L.); (J.K.)
| | - Juseong Kim
- Department of Biomedical Engineering, Duke University, Durham, NC 27708, USA; (B.B.); (B.L.); (J.K.)
| | - Jessilyn P. Dunn
- Department of Biomedical Engineering, Duke University, Durham, NC 27708, USA; (B.B.); (B.L.); (J.K.)
- Department of Biostatistics and Bioinformatics, Duke University, Durham, NC 27708, USA
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24
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Nemcova A, Vitek M, Novakova M. Complex study on compression of ECG signals using novel single-cycle fractal-based algorithm and SPIHT. Sci Rep 2020; 10:15801. [PMID: 32978481 PMCID: PMC7519154 DOI: 10.1038/s41598-020-72656-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2020] [Accepted: 08/26/2020] [Indexed: 11/09/2022] Open
Abstract
Compression of ECG signal is essential especially in the area of signal transmission in telemedicine. There exist many compression algorithms which are described in various details, tested on various datasets and their performance is expressed by different ways. There is a lack of standardization in this area. This study points out these drawbacks and presents new compression algorithm which is properly described, tested and objectively compared with other authors. This study serves as an example how the standardization should look like. Single-cycle fractal-based (SCyF) compression algorithm is introduced and tested on 4 different databases-CSE database, MIT-BIH arrhythmia database, High-frequency signal and Brno University of Technology ECG quality database (BUT QDB). SCyF algorithm is always compared with well-known algorithm based on wavelet transform and set partitioning in hierarchical trees in terms of efficiency (2 methods) and quality/distortion of the signal after compression (12 methods). Detail analysis of the results is provided. The results of SCyF compression algorithm reach up to avL = 0.4460 bps and PRDN = 2.8236%.
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Affiliation(s)
- Andrea Nemcova
- Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Technická 12, 616 00, Brno, Czech Republic.
| | - Martin Vitek
- Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Technická 12, 616 00, Brno, Czech Republic
| | - Marie Novakova
- Department of Physiology, Faculty of Medicine, Masaryk University, Kamenice 753/5, 625 00, Brno, Czech Republic
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Chagnon J, Rebollo-Neira L. Mixed-transform based codec for 2D compression of ECG signals. Biomed Signal Process Control 2020. [DOI: 10.1016/j.bspc.2020.102067] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Chowdhury MH, Cheung RCC. Reconfigurable Architecture for Multi-lead ECG Signal Compression with High-frequency Noise Reduction. Sci Rep 2019; 9:17233. [PMID: 31754217 PMCID: PMC6872821 DOI: 10.1038/s41598-019-53460-3] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2019] [Accepted: 10/28/2019] [Indexed: 11/30/2022] Open
Abstract
Electrocardiogram (ECG) is a record of the heart's electrical activity over a specified period, and it is the most popular noninvasive diagnostic test to identify several cardiac diseases. It is an integral part of a typical eHealth system, where the ECG signals are often needed to be compressed for long term data recording and remote transmission. Reconfigurable architecture offers high-speed parallel computation unit, particularly the Field Programmable Gate Array (FPGA) along with adaptable software features. Hence, this type of design is suitable for multi-channel signal processing units like ECGs, which usually require precise real-time computation. This paper presents a reconfigurable signal processing unit which is implemented in ZedBoard- a development board for Xilinx Zynq -7000 SoC. The compression algorithm is based on Fast Fourier Transformation. The implemented system can work in real-time and achieve a maximum 90% compression rate without any significant signal distortion (i.e., less than 9% normalized percentage of root-mean-square deviation). This compression rate is 5% higher than the state-of-the-art hardware implementation. Additionally, this algorithm has an inherent capability of high-frequency noise reduction, which makes it unique in this field. The confirmatory analysis is done using six databases from the PhysioNet databank to compare and validate the effectiveness of the proposed system.
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Affiliation(s)
- Mehdi Hasan Chowdhury
- Department of EE, City University of Hong Kong, Kowloon, Hong Kong.
- Department of EEE, Chittagong University of Engineering & Technology, Chittagong, Bangladesh.
| | - Ray C C Cheung
- Department of EE, City University of Hong Kong, Kowloon, Hong Kong
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Wang N, Zhou J, Dai G, Huang J, Xie Y. Energy-Efficient Intelligent ECG Monitoring for Wearable Devices. IEEE TRANSACTIONS ON BIOMEDICAL CIRCUITS AND SYSTEMS 2019; 13:1112-1121. [PMID: 31329129 DOI: 10.1109/tbcas.2019.2930215] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Wearable intelligent ECG monitoring devices can perform automatic ECG diagnosis in real time and send out alert signal together with abnormal ECG signal for doctor's further analysis. This provides a means for the patient to identify their heart problem as early as possible and go to doctors for medical treatment. For such system the key requirements include high accuracy and low power consumption. However, the existing wearable intelligent ECG monitoring schemes suffer from high power consumption in both ECG diagnosis and transmission in order to achieve high accuracy. In this work, we have proposed an energy-efficient wearable intelligent ECG monitor scheme with two-stage end-to-end neural network and diagnosis-based adaptive compression. Compared to the state-of-the-art schemes, it significantly reduces the power consumption in ECG diagnosis and transmission while maintaining high accuracy.
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Time-frequency localization using three-tap biorthogonal wavelet filter bank for electrocardiogram compressions. Biomed Eng Lett 2019; 9:407-411. [PMID: 31456900 DOI: 10.1007/s13534-019-00117-9] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2019] [Revised: 06/07/2019] [Accepted: 06/19/2019] [Indexed: 10/26/2022] Open
Abstract
A joint time-frequency localized three-band biorthogonal wavelet filter bank to compress Electrocardiogram signals is proposed in this work. Further, the use of adaptive thresholding and modified run-length encoding resulted in maximum data volume reduction while guaranteeing reconstructing quality. Using signal-to-noise ratio, compression ratio (CR), maximum absolute error (EMA), quality score (Qs), root mean square error, compression time (CT) and percentage root mean square difference the validity of the proposed approach is studied. The experimental results deduced that the performance of the proposed approach is better when compared to the two-band wavelet filter bank. The proposed compression method enables loss-less data transmission of medical signals to remote locations for therapeutic usage.
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30
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A novel fused coupled chaotic map based confidential data embedding-then-encryption of electrocardiogram signal. Biocybern Biomed Eng 2019. [DOI: 10.1016/j.bbe.2018.11.012] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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31
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Rebollo-Neira L. Effective high compression of ECG signals at low level distortion. Sci Rep 2019; 9:4564. [PMID: 30872627 PMCID: PMC6418132 DOI: 10.1038/s41598-019-40350-x] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2018] [Accepted: 02/04/2019] [Indexed: 11/09/2022] Open
Abstract
An effective method for compression of ECG signals, which falls within the transform lossy compression category, is proposed. The transformation is realized by a fast wavelet transform. The effectiveness of the approach, in relation to the simplicity and speed of its implementation, is a consequence of the efficient storage of the outputs of the algorithm which is realized in compressed Hierarchical Data Format. The compression performance is tested on the MIT-BIH Arrhythmia database producing compression results which largely improve upon recently reported benchmarks on the same database. For a distortion corresponding to a percentage root-mean-square difference (PRD) of 0.53, in mean value, the achieved average compression ratio is 23.17 with quality score of 43.93. For a mean value of PRD up to 1.71 the compression ratio increases up to 62.5. The compression of a 30 min record is realized in an average time of 0.14 s. The insignificant delay for the compression process, together with the high compression ratio achieved at low level distortion and the negligible time for the signal recovery, uphold the suitability of the technique for supporting distant clinical health care.
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Birjiniuk J, Gordhandas AJ, Verghese GC, Heldt T. A Fiducial Scaffold for ECG Compression in Low-Powered Devices. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2018; 2018:1-4. [PMID: 30440279 DOI: 10.1109/embc.2018.8512968] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Large volumes of physiological data can now be routinely collected using wearable devices, though a key challenge that remains is the conversion of raw data into clinically relevant and actionable information. While power constraints prevent continuous wireless streaming of large amounts of raw data for offline processing, on-board microprocessors have become sufficiently powerful for data reduction to be performed in real time on the wearable device itself, so that only aggregate, clinically interpretable measures need to be transmitted wirelessly. Here, we use the curve-length transform to extract key beat-by-beat information from the raw ECG waveform, and to identify clinically relevant timing and amplitude information. Each beat is parameterized by 12 morphological features that serve as fiducial markers, sufficient to directly reconstruct a scaffold representation of the ECG waveform. At a nominal heart rate of 70 beats/min and a sampling rate of 250 Hz, typical for wearable monitors, this represents approximately an 18-fold compression. Using difference encoding, the compression ratio improves to 21. Our algorithm computes a running exponentially-weighted average of each identified morphological feature. When any feature deviates significantly from its running average, the algorithm retains the raw waveform for five beats preceding and following the anomaly, enabling future review of the raw data. The algorithm automatically located 93.8% of the 3,615 expert-annotated QRS onsets and offsets in the PhysioNet QT-Database to within 20 ms. Similarly, it located 83.5% of all 3,194 P-wave onset and offset annotations to within 32 ms, and 89.0% of all 3,542 T-wave offset annotations within 72 ms.
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Jha CK, Kolekar MH. Electrocardiogram data compression using DCT based discrete orthogonal Stockwell transform. Biomed Signal Process Control 2018. [DOI: 10.1016/j.bspc.2018.06.009] [Citation(s) in RCA: 36] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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35
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Samie F, Tsoutsouras V, Bauer L, Xydis S, Soudris D, Henkel J. Distributed Trade-Based Edge Device Management in Multi-Gateway IoT. ACM TRANSACTIONS ON CYBER-PHYSICAL SYSTEMS 2018. [DOI: 10.1145/3134842] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Abstract
The Internet-of-Things (IoT) envisions an infrastructure of ubiquitous networked smart devices offering advanced monitoring and control services. The current art in IoT architectures utilizes gateways to enable application-specific connectivity to IoT devices. In typical configurations, IoT gateways are shared among several IoT edge devices. Given the limited available bandwidth and processing capabilities of an IoT gateway, the service quality (SQ) of connected IoT edge devices must be adjusted over time not only to fulfill the needs of individual IoT device users but also to tolerate the SQ needs of the other IoT edge devices sharing the same gateway. However, having multiple gateways introduces an interdependent problem, the binding, i.e., which IoT device shall connect to which gateway.
In this article, we jointly address the binding and allocation problems of IoT edge devices in a multigateway system under the constraints of available bandwidth, processing power, and battery lifetime. We propose a distributed trade-based mechanism in which after an initial setup, gateways negotiate and trade the IoT edge devices to increase the overall SQ. We evaluate the efficiency of the proposed approach with a case study and through extensive experimentation over different IoT system configurations regarding the number and type of the employed IoT edge devices. Experiments show that our solution improves the overall SQ by up to 56% compared to an unsupervised system. Our solution also achieves up to 24.6% improvement on overall SQ compared to the state-of-the-art SQ management scheme, while they both meet the battery lifetime constraints of the IoT devices.
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Affiliation(s)
- Farzad Samie
- Karlsruhe Institute of Technology (KIT), Karlsruhe, Germany
| | | | - Lars Bauer
- Karlsruhe Institute of Technology (KIT), Karlsruhe, Germany
| | | | | | - Jörg Henkel
- Karlsruhe Institute of Technology (KIT), Karlsruhe, Germany
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36
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A Comparative Analysis of Methods for Evaluation of ECG Signal Quality after Compression. BIOMED RESEARCH INTERNATIONAL 2018; 2018:1868519. [PMID: 30112363 PMCID: PMC6077674 DOI: 10.1155/2018/1868519] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/15/2018] [Revised: 06/04/2018] [Accepted: 06/27/2018] [Indexed: 11/17/2022]
Abstract
The assessment of ECG signal quality after compression is an essential part of the compression process. Compression facilitates the signal archiving, speeds up signal transmission, and reduces the energy consumption. Conversely, lossy compression distorts the signals. Therefore, it is necessary to express the compression performance through both compression efficiency and signal quality. This paper provides an overview of objective algorithms for the assessment of both ECG signal quality after compression and compression efficiency. In this area, there is a lack of standardization, and there is no extensive review as such. 40 methods were tested in terms of their suitability for quality assessment. For this purpose, the whole CSE database was used. The tested signals were compressed using an algorithm based on SPIHT with varying efficiency. As a reference, compressed signals were manually assessed by two experts and classified into three quality groups. Owing to the experts' classification, we determined corresponding ranges of selected quality evaluation methods' values. The suitability of the methods for quality assessment was evaluated based on five criteria. For the assessment of ECG signal quality after compression, we recommend using a combination of these methods: PSim SDNN, QS, SNR1, MSE, PRDN1, MAX, STDERR, and WEDD SWT.
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37
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Tan C, Zhang L, Wu HT. A Novel Blaschke Unwinding Adaptive-Fourier-Decomposition-Based Signal Compression Algorithm With Application on ECG Signals. IEEE J Biomed Health Inform 2018; 23:672-682. [PMID: 29993788 DOI: 10.1109/jbhi.2018.2817192] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
This paper presents a novel signal compression algorithm based on the Blaschke unwinding adaptive Fourier decomposition (AFD). The Blaschke unwinding AFD is a newly developed signal decomposition theory. It utilizes the Nevanlinna factorization and the maximal selection principle in each decomposition step, and achieves a faster convergence rate with higher fidelity. The proposed compression algorithm is applied to the electrocardiogram signal. To assess the performance of the proposed compression algorithm, in addition to the generic assessment criteria, we consider the less discussed criteria related to the clinical needs-for the heart rate variability analysis purpose, how accurate the R-peak information is preserved is evaluated. The experiments are conducted on the MIT-BIH arrhythmia benchmark database. The results show that the proposed algorithm performs better than other state-of-the-art approaches. Meanwhile, it also well preserves the R-peak information.
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38
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Jegan R., Nimi W.S.. Sensor Based Smart Real Time Monitoring of Patients Conditions Using Wireless Protocol. INTERNATIONAL JOURNAL OF E-HEALTH AND MEDICAL COMMUNICATIONS 2018. [DOI: 10.4018/ijehmc.2018070105] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
This article describes how physiological signal monitoring plays an important role in identifying the health condition of heart. In recent years, online monitoring and processing of biomedical signals play a major role in accurate clinical diagnosis. Therefore, there is a requirement for the developing of online monitoring systems that will be helpful for physicians to avoid mistakes. This article focuses on the method for real time acquisition of an ECG and PPG signal and it's processing and monitoring for tele-health applications. This article also presents the real time peak detection of ECG and PPG for vital parameters measurement. The implementation and design of the proposed wireless monitoring system can be done using a graphical programming environment that utilizes less power and a minimized area with reasonable speed. The advantages of the proposed work are very simple, low cost, easy integration with programming environment and continuous monitoring of physiological signals.
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Affiliation(s)
- Jegan R.
- Karunya University, Coimbatore, India
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39
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Kaplan Berkaya S, Uysal AK, Sora Gunal E, Ergin S, Gunal S, Gulmezoglu MB. A survey on ECG analysis. Biomed Signal Process Control 2018. [DOI: 10.1016/j.bspc.2018.03.003] [Citation(s) in RCA: 197] [Impact Index Per Article: 28.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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40
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Sharma T, Sharma KK. A new method for QRS detection in ECG signals using QRS-preserving filtering techniques. ACTA ACUST UNITED AC 2018; 63:207-217. [PMID: 28475486 DOI: 10.1515/bmt-2016-0072] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2016] [Accepted: 03/28/2017] [Indexed: 11/15/2022]
Abstract
Detection of QRS complexes in ECG signals is required for various purposes such as determination of heart rate, feature extraction and classification. The problem of automatic QRS detection in ECG signals is complicated by the presence of noise spectrally overlapping with the QRS frequency range. As a solution to this problem, we propose the use of least-squares-optimisation-based smoothing techniques that suppress the noise peaks in the ECG while preserving the QRS complexes. We also propose a novel nonlinear transformation technique that is applied after the smoothing operations, which equalises the QRS amplitudes without boosting the supressed noise peaks. After these preprocessing operations, the R-peaks can finally be detected with high accuracy. The proposed technique has a low computational load and, therefore, it can be used for real-time QRS detection in a wearable device such as a Holter monitor or for fast offline QRS detection. The offline and real-time versions of the proposed technique have been evaluated on the standard MIT-BIH database. The offline implementation is found to perform better than state-of-the-art techniques based on wavelet transforms, empirical mode decomposition, etc. and the real-time implementation also shows improved performance over existing real-time QRS detection techniques.
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Affiliation(s)
- Tanushree Sharma
- Department of Electronics and Communication Engineering, Malaviya National Institute of Technology, JLN Marg, Malaviya Nagar, Jaipur 302017, Rajasthan, India
| | - Kamalesh K Sharma
- Malaviya National Institute of Technology, Jaipur 302017, Rajasthan, India
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A Remote Health Monitoring System for the Elderly Based on Smart Home Gateway. JOURNAL OF HEALTHCARE ENGINEERING 2017; 2017:5843504. [PMID: 29204258 PMCID: PMC5674728 DOI: 10.1155/2017/5843504] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/08/2017] [Revised: 08/16/2017] [Accepted: 09/10/2017] [Indexed: 11/29/2022]
Abstract
This paper proposed a remote health monitoring system for the elderly based on smart home gateway. The proposed system consists of three parts: the smart clothing, the smart home gateway, and the health care server. The smart clothing collects the elderly's electrocardiogram (ECG) and motion signals. The home gateway is used for data transmission. The health care server provides services of data storage and user information management; it is constructed on the Windows-Apache-MySQL-PHP (WAMP) platform and is tested on the Ali Cloud platform. To resolve the issues of data overload and network congestion of the home gateway, an ECG compression algorithm is applied. System demonstration shows that the ECG signals and motion signals of the elderly can be monitored. Evaluation of the compression algorithm shows that it has a high compression ratio and low distortion and consumes little time, which is suitable for home gateways. The proposed system has good scalability, and it is simple to operate. It has the potential to provide long-term and continuous home health monitoring services for the elderly.
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43
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Pandey A, Saini BS, Singh B, Sood N. An Integrated Approach Using Chaotic Map & Sample Value Difference Method for Electrocardiogram Steganography and OFDM Based Secured Patient Information Transmission. J Med Syst 2017; 41:187. [PMID: 29043502 DOI: 10.1007/s10916-017-0830-4] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2017] [Accepted: 10/02/2017] [Indexed: 11/28/2022]
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44
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Liu TY, Lin KJ, Wu HC. ECG Data Encryption Then Compression Using Singular Value Decomposition. IEEE J Biomed Health Inform 2017; 22:707-713. [PMID: 28463208 DOI: 10.1109/jbhi.2017.2698498] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Electrocardiogram (ECG) monitoring systems are widely used in healthcare. ECG data must be compressed for transmission and storage. Furthermore, there is a need to be able to directly process biomedical signals in encrypted domains to ensure the protection of patients' privacy. Existing encryption-then-compression (ETC) approaches for multimedia using the state-of-the-art encryption techniques inevitably sacrifice the compression efficiency or signal quality. This paper presents the first ETC approach for processing ECG data. The proposed approach not only can protect data privacy but also provide the same quality of the reconstructed signals without sacrificing the compression efficiency relative to unencrypted compressions. Specifically, the singular value decomposition technique is used to compress the data such that the proposed system can provide quality-control compressed data, even though the data has been encrypted. Experimental results prove the proposed system to be an effective technique for assuring data security as well as compression performance for ECG data.
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Deepu CJ, Heng CH, Lian Y. A Hybrid Data Compression Scheme for Power Reduction in Wireless Sensors for IoT. IEEE TRANSACTIONS ON BIOMEDICAL CIRCUITS AND SYSTEMS 2017; 11:245-254. [PMID: 27845673 DOI: 10.1109/tbcas.2016.2591923] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
This paper presents a novel data compression and transmission scheme for power reduction in Internet-of-Things (IoT) enabled wireless sensors. In the proposed scheme, data is compressed with both lossy and lossless techniques, so as to enable hybrid transmission mode, support adaptive data rate selection and save power in wireless transmission. Applying the method to electrocardiogram (ECG), the data is first compressed using a lossy compression technique with a high compression ratio (CR). The residual error between the original data and the decompressed lossy data is preserved using entropy coding, enabling a lossless restoration of the original data when required. Average CR of 2.1 × and 7.8 × were achieved for lossless and lossy compression respectively with MIT/BIH database. The power reduction is demonstrated using a Bluetooth transceiver and is found to be reduced to 18% for lossy and 53% for lossless transmission respectively. Options for hybrid transmission mode, adaptive rate selection and system level power reduction make the proposed scheme attractive for IoT wireless sensors in healthcare applications.
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46
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A joint application of optimal threshold based discrete cosine transform and ASCII encoding for ECG data compression with its inherent encryption. AUSTRALASIAN PHYSICAL & ENGINEERING SCIENCES IN MEDICINE 2016; 39:833-855. [PMID: 27613706 DOI: 10.1007/s13246-016-0476-4] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/03/2015] [Accepted: 08/22/2016] [Indexed: 10/21/2022]
Abstract
In this paper, a joint use of the discrete cosine transform (DCT), and differential pulse code modulation (DPCM) based quantization is presented for predefined quality controlled electrocardiogram (ECG) data compression. The formulated approach exploits the energy compaction property in transformed domain. The DPCM quantization has been applied to zero-sequence grouped DCT coefficients that were optimally thresholded via Regula-Falsi method. The generated sequence is encoded using Huffman coding. This encoded series is further converted to a valid ASCII code using the standard codebook for transmission purpose. Such a coded series possesses inherent encryption capability. The proposed technique is validated on all 48 records of standard MIT-BIH database using different measures for compression and encryption. The acquisition time has been taken in accordance to that existed in literature for the fair comparison with contemporary state-of-art approaches. The chosen measures are (1) compression ratio (CR), (2) percent root mean square difference (PRD), (3) percent root mean square difference without base (PRD1), (4) percent root mean square difference normalized (PRDN), (5) root mean square (RMS) error, (6) signal to noise ratio (SNR), (7) quality score (QS), (8) entropy, (9) Entropy score (ES) and (10) correlation coefficient (r x,y ). Prominently the average values of CR, PRD and QS were equal to 18.03, 1.06, and 17.57 respectively. Similarly, the mean encryption metrics i.e. entropy, ES and r x,y were 7.9692, 0.9962 and 0.0113 respectively. The novelty in combining the approaches is well justified by the values of these metrics that are significantly higher than the comparison counterparts.
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47
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Gupta R. Quality Aware Compression of Electrocardiogram Using Principal Component Analysis. J Med Syst 2016; 40:112. [DOI: 10.1007/s10916-016-0468-7] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2015] [Accepted: 02/22/2016] [Indexed: 11/28/2022]
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48
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Ma J, Zhang T, Dong M. A Novel ECG Data Compression Method Using Adaptive Fourier Decomposition With Security Guarantee in e-Health Applications. IEEE J Biomed Health Inform 2015; 19:986-94. [DOI: 10.1109/jbhi.2014.2357841] [Citation(s) in RCA: 72] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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49
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Jun Zhang, Zhenghui Gu, Zhu Liang Yu, Yuanqing Li. Energy-Efficient ECG Compression on Wireless Biosensors via Minimal Coherence Sensing and Weighted $\ell_1$ Minimization Reconstruction. IEEE J Biomed Health Inform 2015; 19:520-8. [DOI: 10.1109/jbhi.2014.2312374] [Citation(s) in RCA: 57] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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50
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EP-based wavelet coefficient quantization for linear distortion ECG data compression. Med Eng Phys 2014; 36:809-21. [DOI: 10.1016/j.medengphy.2014.01.007] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2012] [Revised: 09/16/2013] [Accepted: 01/26/2014] [Indexed: 11/17/2022]
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