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Ringel MJ, Heiselman JS, Richey WL, Meszoely IM, Jarnagin WR, Miga MI. Comparing regularized Kelvinlet functions and the finite element method for registration of medical images to sparse organ data. Med Image Anal 2024; 96:103221. [PMID: 38824864 DOI: 10.1016/j.media.2024.103221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2023] [Revised: 05/06/2024] [Accepted: 05/25/2024] [Indexed: 06/04/2024]
Abstract
Image-guided surgery collocates patient-specific data with the physical environment to facilitate surgical decision making. Unfortunately, these guidance systems commonly become compromised by intraoperative soft-tissue deformations. Nonrigid image-to-physical registration methods have been proposed to compensate for deformations, but clinical utility requires compatibility of these techniques with data sparsity and temporal constraints in the operating room. While finite element models can be effective in sparse data scenarios, computation time remains a limitation to widespread deployment. This paper proposes a registration algorithm that uses regularized Kelvinlets, which are analytical solutions to linear elasticity in an infinite domain, to overcome these barriers. This algorithm is demonstrated and compared to finite element-based registration on two datasets: a phantom liver deformation dataset and an in vivo breast deformation dataset. The regularized Kelvinlets algorithm resulted in a significant reduction in computation time compared to the finite element method. Accuracy as evaluated by target registration error was comparable between methods. Average target registration errors were 4.6 ± 1.0 and 3.2 ± 0.8 mm on the liver dataset and 5.4 ± 1.4 and 6.4 ± 1.5 mm on the breast dataset for the regularized Kelvinlets and finite element method, respectively. Limitations of regularized Kelvinlets include the lack of organ-specific geometry and the assumptions of linear elasticity and infinitesimal strain. Despite limitations, this work demonstrates the generalizability of regularized Kelvinlets registration on two soft-tissue elastic organs. This method may improve and accelerate registration for image-guided surgery, and it shows the potential of using regularized Kelvinlets on medical imaging data.
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Affiliation(s)
- Morgan J Ringel
- Vanderbilt University, Department of Biomedical Engineering, Nashville, TN, USA; Vanderbilt Institute for Surgery and Engineering, Nashville, TN, USA.
| | - Jon S Heiselman
- Vanderbilt University, Department of Biomedical Engineering, Nashville, TN, USA; Vanderbilt Institute for Surgery and Engineering, Nashville, TN, USA; Memorial Sloan-Kettering Cancer Center, Department of Surgery, New York, NY, USA
| | - Winona L Richey
- Vanderbilt University, Department of Biomedical Engineering, Nashville, TN, USA; Vanderbilt Institute for Surgery and Engineering, Nashville, TN, USA
| | - Ingrid M Meszoely
- Vanderbilt University Medical Center, Division of Surgical Oncology, Nashville, TN, USA
| | - William R Jarnagin
- Memorial Sloan-Kettering Cancer Center, Department of Surgery, New York, NY, USA
| | - Michael I Miga
- Vanderbilt University, Department of Biomedical Engineering, Nashville, TN, USA; Vanderbilt Institute for Surgery and Engineering, Nashville, TN, USA
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Mazier A, Bordas SPA. Breast simulation pipeline: From medical imaging to patient-specific simulations. Clin Biomech (Bristol, Avon) 2024; 111:106153. [PMID: 38061204 DOI: 10.1016/j.clinbiomech.2023.106153] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/08/2022] [Revised: 11/17/2023] [Accepted: 11/20/2023] [Indexed: 01/16/2024]
Abstract
BACKGROUND Breast-conserving surgery is the most acceptable operation for breast cancer removal from an invasive and psychological point of view. Before the surgical procedure, a preoperative MRI is performed in the prone configuration, while the surgery is achieved in the supine position. This leads to a considerable movement of the breast, including the tumor, between the two poses, complicating the surgeon's task. METHODS In this work, a simulation pipeline allowing the computation of patient-specific geometry and the prediction of personalized breast material properties was put forward. Through image segmentation, a finite element model including the subject-specific geometry is established. By first computing an undeformed state of the breast, the geometrico-material model is calibrated by surface acquisition in the intra-operative stance. FINDINGS Using an elastic corotational formulation, the patient-specific mechanical properties of the breast and skin were identified to obtain the best estimates of the supine configuration. The final results are a shape-fitting closest point residual of 4.00 mm for the mechanical parameters Ebreast=0.32 kPa and Eskin=22.72 kPa, congruent with the current state-of-the-art. The Covariance Matrix Adaptation Evolution Strategy optimizer converges on average between 5 to 30 min depending on the initial parameters, reaching a simulation speed of 20 s. To our knowledge, our model offers one of the best compromises between accuracy and speed. INTERPRETATION Satisfactory results were obtained for the estimation of breast deformation from preoperative to intra-operative configuration. Furthermore, we have demonstrated the clinical feasibility of such applications using a simulation framework that aims at the smallest disturbance of the actual surgical pipeline.
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Affiliation(s)
- Arnaud Mazier
- Institute of Computational Engineering, Department of Engineering, Université du Luxembourg, Esch-sur-Alzette, Luxembourg
| | - Stéphane P A Bordas
- Institute of Computational Engineering, Department of Engineering, Université du Luxembourg, Esch-sur-Alzette, Luxembourg.
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Ringel MJ, Richey WL, Heiselman JS, Meszoely IM, Miga MI. Incorporating heterogeneity and anisotropy for surgical applications in breast deformation modeling. Clin Biomech (Bristol, Avon) 2023; 104:105927. [PMID: 36890069 PMCID: PMC10122703 DOI: 10.1016/j.clinbiomech.2023.105927] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/21/2022] [Revised: 02/17/2023] [Accepted: 02/23/2023] [Indexed: 03/10/2023]
Abstract
BACKGROUND Simulating soft-tissue breast deformations is of interest for many applications including image fusion, longitudinal registration, and image-guided surgery. For the surgical use case, positional changes cause breast deformations that compromise the use of preoperative imaging to inform tumor excision. Even when acquiring imaging in the supine position, which better reflects surgical presentation, deformations still occur due to arm motion and orientation changes. A biomechanical modeling approach to simulate supine breast deformations for surgical applications must be both accurate and compatible with the clinical workflow. METHODS A supine MR breast imaging dataset from n = 11 healthy volunteers was used to simulate surgical deformations by acquiring images in arm-down and arm-up positions. Three linear-elastic modeling approaches with varying levels of complexity were used to predict deformations caused by this arm motion: a homogeneous isotropic model, a heterogeneous isotropic model, and a heterogeneous anisotropic model using a transverse-isotropic constitutive model. FINDINGS The average target registration errors for subsurface anatomical features were 5.4 ± 1.5 mm for the homogeneous isotropic model, 5.3 ± 1.5 mm for the heterogeneous isotropic model, and 4.7 ± 1.4 mm for the heterogeneous anisotropic model. A statistically significant improvement in target registration error was observed between the heterogeneous anisotropic model and both the homogeneous and the heterogeneous isotropic models (P < 0.01). INTERPRETATION While a model that fully incorporates all constitutive complexities of anatomical structure likely achieves the best accuracy, a computationally tractable heterogeneous anisotropic model provided significant improvement and may be applicable for image-guided breast surgeries.
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Affiliation(s)
- Morgan J Ringel
- Vanderbilt University, Department of Biomedical Engineering, Nashville, TN, USA; Vanderbilt Institute for Surgery and Engineering, Nashville, TN, USA.
| | - Winona L Richey
- Vanderbilt University, Department of Biomedical Engineering, Nashville, TN, USA; Vanderbilt Institute for Surgery and Engineering, Nashville, TN, USA
| | - Jon S Heiselman
- Vanderbilt University, Department of Biomedical Engineering, Nashville, TN, USA; Vanderbilt Institute for Surgery and Engineering, Nashville, TN, USA; Memorial Sloan-Kettering Cancer Center, Department of Surgery, NY, New York, USA
| | - Ingrid M Meszoely
- Vanderbilt University Medical Center, Division of Surgical Oncology, Nashville, TN, USA
| | - Michael I Miga
- Vanderbilt University, Department of Biomedical Engineering, Nashville, TN, USA; Vanderbilt Institute for Surgery and Engineering, Nashville, TN, USA; Vanderbilt University, Department of Radiology and Radiological Sciences, Nashville, TN, USA; Vanderbilt University Medical Center, Department of Neurological Surgery, Nashville, TN, USA; Vanderbilt University Medical Center, Department of Otolaryngology-Head and Neck Surgery, Nashville, TN, USA
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Ringel MJ, Richey WL, Heiselman JS, Luo M, Meszoely IM, Miga MI. Supine magnetic resonance image registration for breast surgery: insights on material mechanics. J Med Imaging (Bellingham) 2022; 9:065001. [PMID: 36388143 PMCID: PMC9659944 DOI: 10.1117/1.jmi.9.6.065001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2022] [Accepted: 10/26/2022] [Indexed: 11/15/2022] Open
Abstract
Purpose Breast conserving surgery (BCS) is a common procedure for early-stage breast cancer patients. Supine preoperative magnetic resonance (MR) breast imaging for visualizing tumor location and extent, while not standard for procedural guidance, is being explored since it more closely represents the surgical presentation compared to conventional diagnostic imaging positions. Despite this preoperative imaging position, deformation is still present between the supine imaging and surgical state. As a result, a fast and accurate image-to-physical registration approach is needed to realize image-guided breast surgery. Approach In this study, three registration methods were investigated on healthy volunteers' breasts ( n = 11 ) with the supine arm-down position simulating preoperative imaging and supine arm-up position simulating intraoperative presentation. The registration methods included (1) point-based rigid registration using synthetic fiducials, (2) nonrigid biomechanical model-based registration using sparse data, and (3) a data-dense three-dimensional diffeomorphic image-based registration from the Advanced Normalization Tools (ANTs) repository. Additionally, deformation metrics (volume change and anisotropy) were calculated from the ANTs deformation field to better understand breast material mechanics. Results The average target registration errors (TRE) were 10.4 ± 2.3 , 6.4 ± 1.5 , and 2.8 ± 1.3 mm (mean ± standard deviation) and the average fiducial registration errors (FRE) were 7.8 ± 1.7 , 2.5 ± 1.1 , and 3.1 ± 1.1 mm for the point-based rigid, nonrigid biomechanical, and ANTs registrations, respectively. The mechanics-based deformation metrics revealed an overall anisotropic tissue behavior and a statistically significant difference in volume change between glandular and adipose tissue, suggesting that nonrigid modeling methods may be improved by incorporating material heterogeneity and anisotropy. Conclusions Overall, registration accuracy significantly improved with increasingly flexible and data-dense registration methods. Analysis of these outcomes may inform the future development of image guidance systems for lumpectomy procedures.
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Affiliation(s)
- Morgan J. Ringel
- Vanderbilt University, Department of Biomedical Engineering, Nashville, Tennessee, United States
- Vanderbilt Institute for Surgery and Engineering, Nashville, Tennessee, United States
| | - Winona L. Richey
- Vanderbilt University, Department of Biomedical Engineering, Nashville, Tennessee, United States
- Vanderbilt Institute for Surgery and Engineering, Nashville, Tennessee, United States
| | - Jon S. Heiselman
- Vanderbilt University, Department of Biomedical Engineering, Nashville, Tennessee, United States
- Vanderbilt Institute for Surgery and Engineering, Nashville, Tennessee, United States
- Memorial Sloan-Kettering Cancer Center, Department of Surgery, New York, New York, United States
| | - Ma Luo
- Vanderbilt University, Department of Biomedical Engineering, Nashville, Tennessee, United States
- Vanderbilt Institute for Surgery and Engineering, Nashville, Tennessee, United States
| | - Ingrid M. Meszoely
- Vanderbilt University Medical Center, Division of Surgical Oncology, Nashville, Tennessee, United States
| | - Michael I. Miga
- Vanderbilt University, Department of Biomedical Engineering, Nashville, Tennessee, United States
- Vanderbilt Institute for Surgery and Engineering, Nashville, Tennessee, United States
- Vanderbilt University, Department of Radiology and Radiological Sciences, Nashville, Tennessee, United States
- Vanderbilt University Medical Center, Department of Neurological Surgery, Nashville, Tennessee, United States
- Vanderbilt University Medical Center, Department of Otolaryngology-Head and Neck Surgery, Nashville, Tennessee, United States
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Zhang X, Zhang W, Sun W, Song A. A new soft tissue deformation model based on Runge-Kutta: Application in lung. Comput Biol Med 2022; 148:105811. [PMID: 35834968 DOI: 10.1016/j.compbiomed.2022.105811] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2022] [Revised: 06/25/2022] [Accepted: 07/03/2022] [Indexed: 11/30/2022]
Abstract
Flexible body deformation model is the most critical research in the field of telemedicine, which decides whether the deformation process of tissues and organs can be simulated in real time and realistically. Basically, the improvement of model accuracy often means the loss of real-time performance. In order to effectively balance between accuracy and real-time performance, this paper proposes a new model, which uses the step-variable fourth-order Runge-Kutta method for the first time to solve the relationship problem between the external force and displacement of the nodes in the finite element deformation of the lung. To improve the real-time performance of the model, a one-stage solution optimization algorithm is proposed to optimize the step size selection problem. Finally, an accelerated two-level node update algorithm is proposed to further improve the real-time performance. A lung surgery simulation platform with 3DMax2020 and OpenGL4.5 is built to verify the accuracy, efficiency, realism and applicability of the model. Experimental results show that the proposed lung model can achieve real-world visual reproduction during remote surgery, and exceeds other 13 reference models in real-time performance, with natural deformation effect, high simulation accuracy, which is suitable for modeling normal lung and four types of lungs suffering from diseases.
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Affiliation(s)
- Xiaorui Zhang
- Wuxi Research Institute, Nanjing University of Information Science & Technology, Wuxi, 214100, China; Engineering Research Center of Digital Forensics, Ministry of Education, Jiangsu Engineering Center of Network Monitoring, School of Computer and Software, Nanjing University of Information Science & Technology, Nanjing, 210044, China
| | - Wenzheng Zhang
- Engineering Research Center of Digital Forensics, Ministry of Education, Jiangsu Engineering Center of Network Monitoring, School of Computer and Software, Nanjing University of Information Science & Technology, Nanjing, 210044, China.
| | - Wei Sun
- School of Automation, Nanjing University of Information Science & Technology, Nanjing, 210044, China
| | - Aiguo Song
- State Key Laboratory of Bioelectronics, Jiangsu Key Lab of Remote Measurement and Control, School of Instrument Science and Engineering, Southeast University, Nanjing, 210096, China
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