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Medical image recognition and analysis using image restoration techniques. Int J Health Sci (Qassim) 2022. [DOI: 10.53730/ijhs.v6ns1.6138] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
The proposed system uses image recognition system that in turn uses the concept of thermal image. The quality of images in dark surroundings is improved using thermal images. The infrared radiations in the image are identified based on the image information that has been created. These images can be captured with the help of infrared cameras and the information is recorded with various temperatures. During this process, image environment are recorded which helps improve the process of matching. The registration of images is done using image registration tools. The images fed as input are divided and image signatures are created. Henceforth, an image model is generated and this helps in the process of matching. The image model is created and stored for any matching process. The proposed system is implemented using image restoration algorithm and experiments authenticate that this work brings efficient result.
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Vianna VP, Murta LO. Long-range medical image registration through generalized mutual information (GMI): towards a fully automatic volumetric alignment. Phys Med Biol 2022; 67. [DOI: 10.1088/1361-6560/ac5298] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2021] [Accepted: 02/07/2022] [Indexed: 11/11/2022]
Abstract
Abstract
Objective. Mutual information (MI) is consolidated as a robust similarity metric often used for medical image registration. Although MI provides a robust registration, it usually fails when the transform needed to register an image is too large due to MI local minima traps. This paper proposes and evaluates Generalized MI (GMI), using Tsallis entropy, to improve affine registration. Approach. We assessed the GMI metric output space using separable affine transforms to seek a better gradient space. The range used was 150 mm for translations, 360° for rotations, [0.5, 2] for scaling, and [−1, 1] for skewness. The data were evaluated using 3D visualization of gradient and contour curves. A simulated gradient descent algorithm was also used to calculate the registration capability. The improvements detected were then tested through Monte Carlo simulation of actual registrations with brain T1 and T2 MRI from the HCP dataset. Main results. Results show significantly prolonged registration ranges, without local minima in the metric space, with a registration capability of 100% for translations, 88.2% for rotations, 100% for scaling and 100% for skewness. Tsallis entropy obtained 99.75% success in the Monte Carlo simulation of 2000 translation registrations with 1113 double randomized subjects T1 and T2 brain MRI against 56.5% success for the Shannon entropy. Significance. Tsallis entropy can improve brain MRI MI affine registration with long-range translation registration, lower-cost interpolation, and faster registrations through a better gradient space.
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A robust non-local total-variation based image registration method under illumination changes in medical applications. Biomed Signal Process Control 2019. [DOI: 10.1016/j.bspc.2018.11.001] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Nonrigid Medical Image Registration Using an Information Theoretic Measure Based on Arimoto Entropy with Gradient Distributions. ENTROPY 2019; 21:e21020189. [PMID: 33266904 PMCID: PMC7514671 DOI: 10.3390/e21020189] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/12/2018] [Revised: 02/02/2019] [Accepted: 02/14/2019] [Indexed: 12/23/2022]
Abstract
This paper introduces a new nonrigid registration approach for medical images applying an information theoretic measure based on Arimoto entropy with gradient distributions. A normalized dissimilarity measure based on Arimoto entropy is presented, which is employed to measure the independence between two images. In addition, a regularization term is integrated into the cost function to obtain the smooth elastic deformation. To take the spatial information between voxels into account, the distance of gradient distributions is constructed. The goal of nonrigid alignment is to find the optimal solution of a cost function including a dissimilarity measure, a regularization term, and a distance term between the gradient distributions of two images to be registered, which would achieve a minimum value when two misaligned images are perfectly registered using limited-memory Broyden–Fletcher–Goldfarb–Shanno (L-BFGS) optimization scheme. To evaluate the test results of our presented algorithm in non-rigid medical image registration, experiments on simulated three-dimension (3D) brain magnetic resonance imaging (MR) images, real 3D thoracic computed tomography (CT) volumes and 3D cardiac CT volumes were carried out on elastix package. Comparison studies including mutual information (MI) and the approach without considering spatial information were conducted. These results demonstrate a slight improvement in accuracy of non-rigid registration.
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Aghajani K, Manzuri MT, Yousefpour R. A robust image registration method based on total variation regularization under complex illumination changes. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2016; 134:89-107. [PMID: 27480735 DOI: 10.1016/j.cmpb.2016.06.004] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2016] [Revised: 05/10/2016] [Accepted: 06/28/2016] [Indexed: 06/06/2023]
Abstract
BACKGROUND AND OBJECTIVE Image registration is one of the fundamental and essential tasks for medical imaging and remote sensing applications. One of the most common challenges in this area is the presence of complex spatially varying intensity distortion in the images. The widely used similarity metrics, such as MI (Mutual Information), CC (Correlation Coefficient), SSD (Sum of Square Difference), SAD (Sum of Absolute Difference) and CR (Correlation Ratio), are not robust against this kind of distortion because stationarity assumption and the pixel-wise independence cannot be obeyed and captured by these metrics. METHODS In this paper, we propose a new intensity-based method for simultaneous image registration and intensity correction. We assume that the registered moving image can be reconstructed by the reference image through a linear function that consists of multiplicative and additive coefficients. We also assume that the illumination changes in the images are spatially smooth in each region, so we use weighted Total Variation as a regularization term to estimate the aforesaid multiplicative and additive coefficients. Using weighted Total Variation leads to reduce the smoothness-effect on the coefficients across the edges and causes low level segmentation on the coefficients. For minimizing the reconstruction error, as a dissimilarity term, we use l1norm which is more robust against illumination change and non-Gaussian noises than the l2 norm. Primal-Dual method is used for solving the optimization problem. RESULTS The proposed method is applied to simulated as well as real-world data consisting of clinically 4-D Computed Tomography, retina, Digital Subtraction Angiography (DSA), and iris image pairs. Then, the comparisons are made to MI, CC, SSD, SAD and RC qualitatively and sometimes quantitatively. CONCLUSIONS The experiment results are demonstrating that the proposed method produces more accurate registration results than conventional methods.
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Affiliation(s)
- Khadijeh Aghajani
- Department of Computer Engineering, Sharif University of Technology, Tehran, Iran.
| | - Mohammad T Manzuri
- Department of Computer Engineering, Sharif University of Technology, Tehran, Iran
| | - Rohollah Yousefpour
- Department of Mathematical and Computer Sciences, University of Mazandaran, Babolsar, Iran
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Alonso FJ, Bueso MC, Angulo JM. Dependence Assessment Based on Generalized Relative Complexity: Application to Sampling Network Design. Methodol Comput Appl Probab 2016. [DOI: 10.1007/s11009-016-9495-6] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Ghaffari A, Fatemizadeh E. RISM: Single-Modal Image Registration via Rank-Induced Similarity Measure. IEEE TRANSACTIONS ON IMAGE PROCESSING : A PUBLICATION OF THE IEEE SIGNAL PROCESSING SOCIETY 2015; 24:5567-5580. [PMID: 26390463 DOI: 10.1109/tip.2015.2479462] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Similarity measure is an important block in image registration. Most traditional intensity-based similarity measures (e.g., sum-of-squared-difference, correlation coefficient, and mutual information) assume a stationary image and pixel-by-pixel independence. These similarity measures ignore the correlation between pixel intensities; hence, perfect image registration cannot be achieved, especially in the presence of spatially varying intensity distortions. Here, we assume that spatially varying intensity distortion (such as bias field) is a low-rank matrix. Based on this assumption, we formulate the image registration problem as a nonlinear and low-rank matrix decomposition (NLLRMD). Therefore, image registration and correction of spatially varying intensity distortion are simultaneously achieved. We illustrate the uniqueness of NLLRMD, and therefore, we propose the rank of difference image as a robust similarity in the presence of spatially varying intensity distortion. Finally, by incorporating the Gaussian noise, we introduce rank-induced similarity measure based on the singular values of the difference image. This measure produces clinically acceptable registration results on both simulated and real-world problems examined in this paper, and outperforms other state-of-the-art measures such as the residual complexity approach.
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Zhang YD, Wang SH, Yang XJ, Dong ZC, Liu G, Phillips P, Yuan TF. Pathological brain detection in MRI scanning by wavelet packet Tsallis entropy and fuzzy support vector machine. SPRINGERPLUS 2015; 4:716. [PMID: 26636004 PMCID: PMC4656268 DOI: 10.1186/s40064-015-1523-4] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/24/2015] [Accepted: 11/10/2015] [Indexed: 12/20/2022]
Abstract
An computer-aided diagnosis system of pathological brain detection (PBD) is important for help physicians interpret and analyze medical images. We proposed a novel automatic PBD to distinguish pathological brains from healthy brains in magnetic resonance imaging scanning in this paper. The proposed method simplified the PBD problem to a binary classification task. We extracted the wavelet packet Tsallis entropy (WPTE) from each brain image. The WPTE is the Tsallis entropy of the coefficients of the discrete wavelet packet transform. The, the features were submitted to the fuzzy support vector machine (FSVM). We tested the proposed diagnosis method on 3 benchmark datasets with different sizes. A ten runs of K-fold stratified cross validation was carried out. The results demonstrated that the proposed WPTE + FSVM method excelled 17 state-of-the-art methods w.r.t. classification accuracy. The WPTE is superior to discrete wavelet transform. The Tsallis entropy performs better than Shannon entropy. The FSVM excels standard SVM. In closing, the proposed method “WPTE + FSVM” is effective in PBD.
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Affiliation(s)
- Yu-Dong Zhang
- School of Computer Science and Technology, Nanjing Normal University, Nanjing, Jiangsu 210023 China.,Jiangsu Key Laboratory of 3D Printing Equipment and Manufacturing, Nanjing, Jiangsu 210042 China
| | - Shui-Hua Wang
- School of Computer Science and Technology, Nanjing Normal University, Nanjing, Jiangsu 210023 China.,Jiangsu Key Laboratory of 3D Printing Equipment and Manufacturing, Nanjing, Jiangsu 210042 China
| | - Xiao-Jun Yang
- Department of Mathematics and Mechanics, China University of Mining and Technology, Xuzhou, Jiangsu 221008 China
| | - Zheng-Chao Dong
- Translational Imaging Division and MRI Unit, Columbia University and New York State Psychiatric Institute, New York, NY 10032 USA
| | - Ge Liu
- Department of Psychiatry, College of Physicians and Surgeons, Columbia University, New York, NY 10032 USA
| | - Preetha Phillips
- School of Natural Sciences and Mathematics, Shepherd University, Shepherdstown, WV 25443 USA
| | - Ti-Fei Yuan
- School of Psychology, Nanjing Normal University, Nanjing, Jiangsu 210008 China
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Li B, Yang G, Coatrieux JL, Li B, Shu H. 3D nonrigid medical image registration using a new information theoretic measure. Phys Med Biol 2015; 60:8767-90. [PMID: 26528821 DOI: 10.1088/0031-9155/60/22/8767] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
This work presents a novel method for the nonrigid registration of medical images based on the Arimoto entropy, a generalization of the Shannon entropy. The proposed method employed the Jensen-Arimoto divergence measure as a similarity metric to measure the statistical dependence between medical images. Free-form deformations were adopted as the transformation model and the Parzen window estimation was applied to compute the probability distributions. A penalty term is incorporated into the objective function to smooth the nonrigid transformation. The goal of registration is to optimize an objective function consisting of a dissimilarity term and a penalty term, which would be minimal when two deformed images are perfectly aligned using the limited memory BFGS optimization method, and thus to get the optimal geometric transformation. To validate the performance of the proposed method, experiments on both simulated 3D brain MR images and real 3D thoracic CT data sets were designed and performed on the open source elastix package. For the simulated experiments, the registration errors of 3D brain MR images with various magnitudes of known deformations and different levels of noise were measured. For the real data tests, four data sets of 4D thoracic CT from four patients were selected to assess the registration performance of the method, including ten 3D CT images for each 4D CT data covering an entire respiration cycle. These results were compared with the normalized cross correlation and the mutual information methods and show a slight but true improvement in registration accuracy.
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Affiliation(s)
- Bicao Li
- Laboratory of Image Science and Technology, School of Computer Science and Engineering, Southeast University, 210096 Nanjing, People's Republic of China. Key Laboratory of Computer Network and Information Integration (Southeast University), Ministry of Education, 210096 Nanjing, People's Republic of China. Centre de Recherche en Information Médicale Sino-français (CRIBs), Nanjing, 210096, People's Republic of China
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Preclinical Diagnosis of Magnetic Resonance (MR) Brain Images via Discrete Wavelet Packet Transform with Tsallis Entropy and Generalized Eigenvalue Proximal Support Vector Machine (GEPSVM). ENTROPY 2015. [DOI: 10.3390/e17041795] [Citation(s) in RCA: 147] [Impact Index Per Article: 14.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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Zhang J, Lu ZT, Pigrish V, Feng QJ, Chen WF. Intensity based image registration by minimizing exponential function weighted residual complexity. Comput Biol Med 2013; 43:1484-96. [PMID: 24034740 DOI: 10.1016/j.compbiomed.2013.07.017] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2013] [Revised: 07/15/2013] [Accepted: 07/16/2013] [Indexed: 10/26/2022]
Abstract
In this paper, we propose a novel intensity-based similarity measure for medical image registration. Traditional intensity-based methods are sensitive to intensity distortions, contrast agent and noise. Although residual complexity can solve this problem in certain situations, relative modification of the parameter can generate dramatically different results. By introducing a specifically designed exponential weighting function to the residual term in residual complexity, the proposed similarity measure performed well due to automatically weighting the residual image between the reference image and the warped floating image. We utilized local variance of the reference image to model the exponential weighting function. The proposed technique was applied to brain magnetic resonance images, dynamic contrast enhanced magnetic resonance images (DCE-MRI) of breasts and contrast enhanced 3D CT liver images. The experimental results clearly indicated that the proposed approach has achieved more accurate and robust performance than mutual information, residual complexity and Jensen-Tsallis.
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Affiliation(s)
- Juan Zhang
- School of Biomedical Engineering, Southern Medical University, Guangzhou 510515, China.
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Guzman AM, Goryawala M, Wang J, Barreto A, Andrian J, Rishe N, Adjouadi M. Thermal Imaging as a Biometrics Approach to Facial Signature Authentication. IEEE J Biomed Health Inform 2013; 17:214-22. [PMID: 22801524 DOI: 10.1109/titb.2012.2207729] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Ribeiro HV, Zunino L, Lenzi EK, Santoro PA, Mendes RS. Complexity-entropy causality plane as a complexity measure for two-dimensional patterns. PLoS One 2012; 7:e40689. [PMID: 22916097 PMCID: PMC3419253 DOI: 10.1371/journal.pone.0040689] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2012] [Accepted: 06/11/2012] [Indexed: 11/18/2022] Open
Abstract
Complexity measures are essential to understand complex systems and there are numerous definitions to analyze one-dimensional data. However, extensions of these approaches to two or higher-dimensional data, such as images, are much less common. Here, we reduce this gap by applying the ideas of the permutation entropy combined with a relative entropic index. We build up a numerical procedure that can be easily implemented to evaluate the complexity of two or higher-dimensional patterns. We work out this method in different scenarios where numerical experiments and empirical data were taken into account. Specifically, we have applied the method to fractal landscapes generated numerically where we compare our measures with the Hurst exponent; liquid crystal textures where nematic-isotropic-nematic phase transitions were properly identified; 12 characteristic textures of liquid crystals where the different values show that the method can distinguish different phases; and Ising surfaces where our method identified the critical temperature and also proved to be stable.
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Affiliation(s)
- Haroldo V Ribeiro
- Departamento de Física and National Institute of Science and Technology for Complex Systems, Universidade Estadual de Maringá, Maringá, Brazil.
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Gaidhane VH, Hote YV, Singh V. Nonrigid image registration using efficient similarity measure and Levenberg-Marquardt optimization. Biomed Eng Lett 2012. [DOI: 10.1007/s13534-012-0062-y] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022] Open
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