1
|
Aliani C, Rossi E, Luchini M, Calamai I, Deodati R, Spina R, Francia P, Lanata A, Bocchi L. Automatic COVID-19 severity assessment from HRV. Sci Rep 2023; 13:1713. [PMID: 36720970 PMCID: PMC9887241 DOI: 10.1038/s41598-023-28681-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2022] [Accepted: 01/23/2023] [Indexed: 02/01/2023] Open
Abstract
COVID-19 is known to be a cause of microvascular disease imputable to, for instance, the cytokine storm inflammatory response and the consequent blood coagulation. In this study, we propose a methodological approach for assessing the COVID-19 presence and severity based on Random Forest (RF) and Support Vector Machine (SVM) classifiers. Classifiers were applied to Heart Rate Variability (HRV) parameters extracted from photoplethysmographic (PPG) signals collected from healthy and COVID-19 affected subjects. The supervised classifiers were trained and tested on HRV parameters obtained from the PPG signals in a cohort of 50 healthy subjects and 93 COVID-19 affected subjects, divided into two groups, mild and moderate, based on the support of oxygen therapy and/or ventilation. The most informative feature set for every group's comparison was determined with the Least Absolute Shrinkage and Selection Operator (LASSO) technique. Both RF and SVM classifiers showed a high accuracy percentage during groups' comparisons. In particular, the RF classifier reached 94% of accuracy during the comparison between the healthy and minor severity COVID-19 group. Obtained results showed a strong capability of RF and SVM to discriminate between healthy subjects and COVID-19 patients and to differentiate the two different COVID-19 severity. The proposed method might be helpful for detecting, in a low-cost and fast fashion, the presence and severity of COVID-19 disease; moreover, these reasons make this method interesting as a starting point for future studies that aim to investigate its effectiveness as a possible screening method.
Collapse
Affiliation(s)
- Cosimo Aliani
- Department of Information Engineering, University of Florence, Florence, Italy.
| | - Eva Rossi
- Department of Information Engineering, University of Florence, Florence, Italy
| | - Marco Luchini
- UOs Anesthesiology and Reanimation Unit, San Giuseppe Hospital, Empoli, Italy
| | - Italo Calamai
- UOs Anesthesiology and Reanimation Unit, San Giuseppe Hospital, Empoli, Italy
| | - Rossella Deodati
- UOs Anesthesiology and Reanimation Unit, San Giuseppe Hospital, Empoli, Italy
| | - Rosario Spina
- UOs Anesthesiology and Reanimation Unit, San Giuseppe Hospital, Empoli, Italy
| | - Piergiorgio Francia
- Department of Information Engineering, University of Florence, Florence, Italy
| | - Antonio Lanata
- Department of Information Engineering, University of Florence, Florence, Italy
| | - Leonardo Bocchi
- Department of Information Engineering, University of Florence, Florence, Italy
| |
Collapse
|
2
|
Candia-Rivera D, Sappia MS, Horschig JM, Colier WNJM, Valenza G. Confounding effects of heart rate, breathing rate, and frontal fNIRS on interoception. Sci Rep 2022; 12:20701. [PMID: 36450811 PMCID: PMC9712694 DOI: 10.1038/s41598-022-25119-z] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2022] [Accepted: 11/24/2022] [Indexed: 12/02/2022] Open
Abstract
Recent studies have established that cardiac and respiratory phases can modulate perception and related neural dynamics. While heart rate and respiratory sinus arrhythmia possibly affect interoception biomarkers, such as heartbeat-evoked potentials, the relative changes in heart rate and cardiorespiratory dynamics in interoceptive processes have not yet been investigated. In this study, we investigated the variation in heart and breathing rates, as well as higher functional dynamics including cardiorespiratory correlation and frontal hemodynamics measured with fNIRS, during a heartbeat counting task. To further investigate the functional physiology linked to changes in vagal activity caused by specific breathing rates, we performed the heartbeat counting task together with a controlled breathing rate task. The results demonstrate that focusing on heartbeats decreases breathing and heart rates in comparison, which may be part of the physiological mechanisms related to "listening" to the heart, the focus of attention, and self-awareness. Focusing on heartbeats was also observed to increase frontal connectivity, supporting the role of frontal structures in the neural monitoring of visceral inputs. However, cardiorespiratory correlation is affected by both heartbeats counting and controlled breathing tasks. Based on these results, we concluded that variations in heart and breathing rates are confounding factors in the assessment of interoceptive abilities and relative fluctuations in breathing and heart rates should be considered to be a mode of covariate measurement of interoceptive processes.
Collapse
Affiliation(s)
- Diego Candia-Rivera
- Bioengineering and Robotics Research Center E. Piaggio & Department of Information Engineering, School of Engineering, University of Pisa, 56122, Pisa, Italy.
| | - M Sofía Sappia
- Artinis Medical Systems, B.V., Einsteinweg 17, 6662 PW, Elst, The Netherlands
- Donders Institute for Brain, Behaviour and Cognition, Radboud University Nijmegen, 6525 EN, Nijmegen, The Netherlands
| | - Jörn M Horschig
- Artinis Medical Systems, B.V., Einsteinweg 17, 6662 PW, Elst, The Netherlands
| | - Willy N J M Colier
- Artinis Medical Systems, B.V., Einsteinweg 17, 6662 PW, Elst, The Netherlands
| | - Gaetano Valenza
- Bioengineering and Robotics Research Center E. Piaggio & Department of Information Engineering, School of Engineering, University of Pisa, 56122, Pisa, Italy
| |
Collapse
|
3
|
Agustí DPI, Guilera T, Fortea JL, Lladós MG, Ganau J, Pifarre J. Increase in Stress Level in Public Spaces Following the Application of Measures Against COVID-19: An Exploratory Study. ECOPSYCHOLOGY 2022. [DOI: 10.1089/eco.2021.0021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Affiliation(s)
| | - Teresa Guilera
- Psychiatry Service, Santa Maria University Hospital, Lleida, Spain
- Institute for Biomedical Research in Lleida Dr. Pifarré Foundation (IRBLleida), Lleida, Spain
| | - José Lasala Fortea
- Departament de Geografia i Sociologia, Universitat de Lleida, Lleida, Spain
| | | | - Joan Ganau
- Departament de Geografia i Sociologia, Universitat de Lleida, Lleida, Spain
| | - Josep Pifarre
- Psychiatry Service, Santa Maria University Hospital, Lleida, Spain
- Institute for Biomedical Research in Lleida Dr. Pifarré Foundation (IRBLleida), Lleida, Spain
- Sant Joan de Déu Terres de Lleida (SJDTLL), Lleida, Spain
| |
Collapse
|
4
|
Sadeghi M, Sasangohar F, McDonald AD. Toward a Taxonomy for Analyzing the Heart Rate as a Physiological Indicator of Posttraumatic Stress Disorder: Systematic Review and Development of a Framework. JMIR Ment Health 2020; 7:e16654. [PMID: 32706710 PMCID: PMC7407264 DOI: 10.2196/16654] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/10/2019] [Revised: 03/11/2020] [Accepted: 04/03/2020] [Indexed: 12/14/2022] Open
Abstract
BACKGROUND Posttraumatic stress disorder (PTSD) is a prevalent psychiatric condition that is associated with symptoms such as hyperarousal and overreactions. Treatments for PTSD are limited to medications and in-session therapies. Assessing the way the heart responds to PTSD has shown promise in detecting and understanding the onset of symptoms. OBJECTIVE This study aimed to extract statistical and mathematical approaches that researchers can use to analyze heart rate (HR) data to understand PTSD. METHODS A scoping literature review was conducted to extract HR models. A total of 5 databases including Medical Literature Analysis and Retrieval System Online (Medline) OVID, Medline EBSCO, Cumulative Index to Nursing and Allied Health Literature (CINAHL) EBSCO, Excerpta Medica Database (Embase) Ovid, and Google Scholar were searched. Non-English language studies, as well as studies that did not analyze human data, were excluded. A total of 54 studies that met the inclusion criteria were included in this review. RESULTS We identified 4 categories of models: descriptive time-independent output, descriptive and time-dependent output, predictive and time-independent output, and predictive and time-dependent output. Descriptive and time-independent output models include analysis of variance and first-order exponential; the descriptive time-dependent output model includes a classical time series analysis and mixed regression. Predictive time-independent output models include machine learning methods and analysis of the HR-based fluctuation-dissipation method. Finally, predictive time-dependent output models include the time-variant method and nonlinear dynamic modeling. CONCLUSIONS All of the identified modeling categories have relevance in PTSD, although the modeling selection is dependent on the specific goals of the study. Descriptive models are well-founded for the inference of PTSD. However, there is a need for additional studies in this area that explore a broader set of predictive models and other factors (eg, activity level) that have not been analyzed with descriptive models.
Collapse
Affiliation(s)
- Mahnoosh Sadeghi
- Department of Industrial and Systems Engineering, Texas A&M University, College Station, TX, United States
| | - Farzan Sasangohar
- Department of Industrial and Systems Engineering, Texas A&M University, College Station, TX, United States
- Center for Outcomes Research, Houston Methodist Hospital, Houston, TX, United States
| | - Anthony D McDonald
- Department of Industrial and Systems Engineering, Texas A&M University, College Station, TX, United States
| |
Collapse
|
5
|
Nardelli M, Valenza G, Greco A, Lanatá A, Scilingo EP, Bailón R. Quantifying the lagged Poincaré plot geometry of ultrashort heart rate variability series: automatic recognition of odor hedonic tone. Med Biol Eng Comput 2020; 58:1099-1112. [PMID: 32162243 DOI: 10.1007/s11517-019-02095-7] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2019] [Accepted: 12/06/2019] [Indexed: 10/24/2022]
Abstract
The application of Poincaré plot analysis to characterize inter-beat interval dynamics has been successfully proposed in the scientific literature for the assessment of humans' physiological states and related aberrations. In this study, we proposed novel descriptors to trace the evolution of Poincaré plot shape over the lags. Their reliability in ultra-short cardiovascular series analysis was validated on synthetic inter-beat series generated through a physiologically plausible integral pulse frequency modulation model. Furthermore, we used the proposed approach for the investigation of the direct relationship between autonomic nervous system (ANS) dynamics and hedonic olfactory elicitation, in a group of 30 healthy subjects. Participants with a similar olfactory threshold were selected, and were asked to score 5-s stimuli in terms of arousal and valence levels according to the Russell's circumflex model of affect. Their ANS response was investigated in 35-s windows after the elicitation. Experimental results showed a gender-specific, high discriminant power of the proposed approach, discerning between pleasant and unpleasant odorants with an accuracy of 83.33% and 73.33% for men and for women, respectively. Graphical Abstract Olfaction plays a crucial role in our life and is strictly related to the Autonomic Nervous System (ANS) activity, which can be monitored studying Heart Rate Variability. We used the Lagged Poincare Plot approach to recognize gender-specific ANS response in 35-second windows after the elicitation through pleasant/unpleasant odorants.
Collapse
Affiliation(s)
- M Nardelli
- Department of Information Engineering, Research Centre E. Piaggio, University of Pisa, Via G. Caruso 16, Pisa, Italy.
| | - G Valenza
- Department of Information Engineering, Research Centre E. Piaggio, University of Pisa, Via G. Caruso 16, Pisa, Italy
| | - A Greco
- Department of Information Engineering, Research Centre E. Piaggio, University of Pisa, Via G. Caruso 16, Pisa, Italy
| | - A Lanatá
- Department of Information Engineering, Research Centre E. Piaggio, University of Pisa, Via G. Caruso 16, Pisa, Italy
| | - E P Scilingo
- Department of Information Engineering, Research Centre E. Piaggio, University of Pisa, Via G. Caruso 16, Pisa, Italy
| | - R Bailón
- BSICoS Group, Aragón Institute of Engineering Research (I3A), IIS Aragón, University of Zaragoza, Zaragoza, Spain.,CIBER of Bioengineering, Biomaterials and Nanomedicine (CIBER - BBN), Madrid, Spain
| |
Collapse
|
6
|
Yamuza MTV, Bolea J, Orini M, Laguna P, Orrite C, Vallverdu M, Bailon R. Human Emotion Characterization by Heart Rate Variability Analysis Guided by Respiration. IEEE J Biomed Health Inform 2019; 23:2446-2454. [DOI: 10.1109/jbhi.2019.2895589] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
|
7
|
Valderas MT, Bolea J, Laguna P, Bailón R, Vallverdú M. Mutual information between heart rate variability and respiration for emotion characterization. Physiol Meas 2019; 40:084001. [DOI: 10.1088/1361-6579/ab310a] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
|
8
|
Nardelli M, Greco A, Valenza G, Lanata A, Bailon R, Scilingo EP. A novel Heart Rate Variability analysis using Lagged Poincaré plot: A study on hedonic visual elicitation. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2017; 2017:2300-2303. [PMID: 29060357 DOI: 10.1109/embc.2017.8037315] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
This paper reports on a novel method for the analysis of Heart Rate Variability (HRV) through Lagged Poincaré Plot (LPP) theory. Specifically a hybrid method, LPPsymb, including LPP quantifiers and related symbolic dynamics was proposed. LPP has been applied to investigate the autonomic response to pleasant and unpleasant pictures extracted from the International Affective Picture System (IAPS). IAPS pictures are standardized in terms of level of arousal, i.e. the intensity of the evoked emotion, and valence, i.e. the level of pleasantness/unpleasantness, according to the Circumplex model of Affects (CMA). Twenty-two healthy subjects were enrolled in the experiment, which comprised four sessions with increasing arousal level. Within each session valence increased from positive to negative. An ad-hoc pattern recognition algorithm using a Leave-One-Subject-Out (LOSO) procedure based on a Quadratic Discriminant Classifier (QDC) was implemented. Our pattern recognition system was able to classify pleasant and unpleasant sessions with an accuracy of 71.59%. Therefore, we can suggest the use of the LPPsymb for emotion recognition.
Collapse
|
9
|
Lado MJ, Cuesta P, García Caballero A, Vila XA. Influence of visual elicitation over emotion regulation: An investigation employing the heart rate variability. J Integr Neurosci 2017; 16:209-226. [PMID: 28891510 DOI: 10.3233/jin-170014] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
Several works studied the elicitation of emotions through the exposure of individuals to relevant stimuli, using spectral analysis of Heart Rate Variability (HRV) when people are subject to emotional elicitation. If correlation exists between HRV and emotional responses, spectral analysis can be used to study emotion regulation under external stimuli. In this work, we studied the relationship between visual elicitation and emotion regulation, employing HRV. Images (with pleasant, unpleasant and neutral emotional content) were selected from the IAPS (International Affective Picture System) dataset. Ninety-eight participants were enrolled, and subject to view all images, displayed in random order for each participant. Heart rate was recorded during the experiment, and HRV analysis was performed. Spectral values were studied for the different images. The presentation order of images was relevant, mainly when unpleasant images were viewed in first place; this significantly affects HRV values. Spectral values were higher for men, being this difference stronger when pleasant pictures were displayed. Age and gender dependences of spectral indexes were found. The influence of visual elicitation, with different emotional contents, over HRV, was assessed. Results indicate that HRV parameters are affected when individuals are subject to external, emotional-based stimuli.
Collapse
Affiliation(s)
- María J Lado
- Department of Computer Science, ESEI, University of Vigo, Campus As Lagoas, 32004 Ourense, Spain
| | - P Cuesta
- Department of Computer Science, ESEI, University of Vigo, Campus As Lagoas, 32004 Ourense, Spain
| | | | - Xosé A Vila
- Department of Computer Science, ESEI, University of Vigo, Campus As Lagoas, 32004 Ourense, Spain
| |
Collapse
|
10
|
Multivariate Brain Prediction of Heart Rate and Skin Conductance Responses to Social Threat. J Neurosci 2017; 36:11987-11998. [PMID: 27881783 DOI: 10.1523/jneurosci.3672-15.2016] [Citation(s) in RCA: 58] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2015] [Revised: 09/26/2016] [Accepted: 09/26/2016] [Indexed: 12/18/2022] Open
Abstract
Psychosocial stressors induce autonomic nervous system (ANS) responses in multiple body systems that are linked to health risks. Much work has focused on the common effects of stress, but ANS responses in different body systems are dissociable and may result from distinct patterns of cortical-subcortical interactions. Here, we used machine learning to develop multivariate patterns of fMRI activity predictive of heart rate (HR) and skin conductance level (SCL) responses during social threat in humans (N = 18). Overall, brain patterns predicted both HR and SCL in cross-validated analyses successfully (rHR = 0.54, rSCL = 0.58, both p < 0.0001). These patterns partly reflected central stress mechanisms common to both responses because each pattern predicted the other signal to some degree (rHR→SCL = 0.21 and rSCL→HR = 0.22, both p < 0.01), but they were largely physiological response specific. Both patterns included positive predictive weights in dorsal anterior cingulate and cerebellum and negative weights in ventromedial PFC and local pattern similarity analyses within these regions suggested that they encode common central stress mechanisms. However, the predictive maps and searchlight analysis suggested that the patterns predictive of HR and SCL were substantially different across most of the brain, including significant differences in ventromedial PFC, insula, lateral PFC, pre-SMA, and dmPFC. Overall, the results indicate that specific patterns of cerebral activity track threat-induced autonomic responses in specific body systems. Physiological measures of threat are not interchangeable, but rather reflect specific interactions among brain systems. SIGNIFICANCE STATEMENT We show that threat-induced increases in heart rate and skin conductance share some common representations in the brain, located mainly in the vmPFC, temporal and parahippocampal cortices, thalamus, and brainstem. However, despite these similarities, the brain patterns that predict these two autonomic responses are largely distinct. This evidence for largely output-measure-specific regulation of autonomic responses argues against a common system hypothesis and provides evidence that different autonomic measures reflect distinct, measurable patterns of cortical-subcortical interactions.
Collapse
|
11
|
Valenza G, Faes L, Citi L, Orini M, Barbieri R. Instantaneous Transfer Entropy for the Study of Cardiovascular and Cardiorespiratory Nonstationary Dynamics. IEEE Trans Biomed Eng 2017; 65:1077-1085. [PMID: 28816654 DOI: 10.1109/tbme.2017.2740259] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
OBJECTIVE Measures of transfer entropy (TE) quantify the direction and strength of coupling between two complex systems. Standard approaches assume stationarity of the observations, and therefore are unable to track time-varying changes in nonlinear information transfer with high temporal resolution. In this study, we aim to define and validate novel instantaneous measures of TE to provide an improved assessment of complex nonstationary cardiorespiratory interactions. METHODS We here propose a novel instantaneous point-process TE (ipTE) and validate its assessment as applied to cardiovascular and cardiorespiratory dynamics. In particular, heartbeat and respiratory dynamics are characterized through discrete time series, and modeled with probability density functions predicting the time of the next physiological event as a function of the past history. Likewise, nonstationary interactions between heartbeat and blood pressure dynamics are characterized as well. Furthermore, we propose a new measure of information transfer, the instantaneous point-process information transfer (ipInfTr), which is directly derived from point-process-based definitions of the Kolmogorov-Smirnov distance. RESULTS AND CONCLUSION Analysis on synthetic data, as well as on experimental data gathered from healthy subjects undergoing postural changes confirms that ipTE, as well as ipInfTr measures are able to dynamically track changes in physiological systems coupling. SIGNIFICANCE This novel approach opens new avenues in the study of hidden, transient, nonstationary physiological states involving multivariate autonomic dynamics in cardiovascular health and disease. The proposed method can also be tailored for the study of complex multisystem physiology (e.g., brain-heart or, more in general, brain-body interactions).
Collapse
|
12
|
Nardelli M, Greco A, Bianchi M, Scilingo EP, Valenza G. On the pleasantness of a haptic stimulation: how different textures can be recognized through heart rate variability nonlinear analysis. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2016; 2016:3560-3563. [PMID: 28269067 DOI: 10.1109/embc.2016.7591497] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
The hedonic attributes of cutaneous elicitation play a crucial role in everyday life, influencing our behavior and psychophysical state. However, the correlation between such a hedonic aspect of touch and the Autonomic Nervous System (ANS)-related physiological response, which is intimately connected to emotions, still needs to be deeply investigated. This study reports on caress-like stimuli conveyed to the forearm of 32 healthy subjects through different fabrics actuated by a haptic device, which can control both the strength (i.e. the normal force exerted by the fabric) and the velocity of the elicitation. The mimicked caresses were elicited with a fixed force of 6 N, two levels of velocity of 9.4 mm/sec and 65 mm/sec, and four different fabrics with different textures: burlap, hemp, velvet and silk. Participants were asked to score the caress-like stimuli in terms of arousal and valence through a self-assessment questionnaire. Heartbeat data related to the perceived most pleasant (silk) and unpleasant (burlap) fabrics were used as an input to an automatic pattern recognition procedure. Accordingly, considering gender differences, support vector machines using features extracted from linear and nonlinear heartbeat dynamics showed a recognition accuracy of 84.38% (men) and 78.13% (women) while discerning between burlap and silk elicitations at the higher velocity. Results suggest that the fabrics used for the caress-like stimulation significantly affect the nonlinear cardiovascular dynamics, also showing differences according to gender.
Collapse
|
13
|
Vila Blanco N, Rodríguez-Liñares L, Cuesta P, Lado MJ, Méndez AJ, Vila XA. gVARVI: A graphical software tool for the acquisition of the heart rate in response to external stimuli. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2016; 132:197-205. [PMID: 27282239 DOI: 10.1016/j.cmpb.2016.05.005] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2015] [Accepted: 05/17/2016] [Indexed: 06/06/2023]
Abstract
BACKGROUND AND OBJECTIVE At present, tools capable of acquiring heart rate data can be found both in commercial and research fields. However, these tools do not allow users to manage experiments comprising sequences of activities or to store the information needed to perform heart rate variability analysis across different activities. One exception is VARVI, a simple software tool developed previously in our research group that does not have a graphical user interface and it works only with visual stimuli. In this paper, we present gVARVI, a software tool aimed at obtaining heart rate data signals while the user is either receiving a sequence of external stimuli or performing a sequence of actions (an activity). METHODS gVARVI is an open source application developed in Python programming language. It can acquire heart rate data by means of a wireless chest strap using either Bluetooth or ANT+ protocols. Users can define activities of different types (video, sounds, pictures or keyboard controlled actions) which will associate contextual information to the heart rate data. gVARVI allows users to preview this data or to store it to be used for heart rate variability studies. Our tool was validated by 15 researchers, who worked with the application and filled in a usability questionnaire. RESULTS The outcome of the usability test was satisfactory, giving a mean score of 4.75 in a 1-5 scale (1 - strongly disagree, 5 - strongly agree). Participants also contributed with valuable comments, which we used to include new features in the last version of our tool. CONCLUSIONS gVARVI is an open source tool that offers new possibilities to both physicians and clinicians to perform heart rate variability studies. It allows users to acquire heart rate data including information on the activity performed by subjects while recording. In this paper, we describe all the functionalities included in gVARVI, and a complete example of use is provided.
Collapse
Affiliation(s)
- N Vila Blanco
- Departamento de Informática, Universidade de Vigo, Ourense, Spain
| | | | - P Cuesta
- Departamento de Informática, Universidade de Vigo, Ourense, Spain
| | - M J Lado
- Departamento de Informática, Universidade de Vigo, Ourense, Spain
| | - A J Méndez
- Departamento de Informática, Universidade de Vigo, Ourense, Spain
| | - X A Vila
- Departamento de Informática, Universidade de Vigo, Ourense, Spain.
| |
Collapse
|
14
|
|
15
|
Valenza G, Nardelli M, Lanata A, Gentili C, Bertschy G, Kosel M, Scilingo EP. Predicting Mood Changes in Bipolar Disorder Through Heartbeat Nonlinear Dynamics. IEEE J Biomed Health Inform 2016; 20:1034-1043. [DOI: 10.1109/jbhi.2016.2554546] [Citation(s) in RCA: 41] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
|
16
|
Nardelli M, Valenza G, Greco A, Lanata A, Scilingo EP. Arousal recognition system based on heartbeat dynamics during auditory elicitation. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2016; 2015:6110-3. [PMID: 26737686 DOI: 10.1109/embc.2015.7319786] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
This study reports on the recognition of different arousal levels, elicited by affective sounds, performed using estimates of autonomic nervous system dynamics. Specifically, as a part of the circumplex model of affect, arousal levels were recognized by properly combining information gathered from standard and nonlinear analysis of heartbeat dynamics, which was derived from the electrocardiogram (ECG). Affective sounds were gathered from the International Affective Digitized Sound System and grouped into four different levels of arousal. A group of 27 healthy volunteers underwent such elicitation while ECG signals were continuously recorded. Results showed that a quadratic discriminant classifier, as applied implementing a leave-one-subject-out procedure, achieved a recognition accuracy of 84.26%. Moreover, this study confirms the crucial role of heartbeat nonlinear dynamics for emotion recognition, hereby estimated through lagged Poincare plots.
Collapse
|
17
|
Greco A, Valenza G, Lanata A, Rota G, Scilingo EP. Electrodermal activity in bipolar patients during affective elicitation. IEEE J Biomed Health Inform 2015; 18:1865-73. [PMID: 25375684 DOI: 10.1109/jbhi.2014.2300940] [Citation(s) in RCA: 66] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Bipolar patients are characterized by a pathological unpredictable behavior, resulting in fluctuations between states of depression and episodes of mania or hypomania. In the current clinical practice, the psychiatric diagnosis is made through clinician-administered rating scales and questionnaires, disregarding the potential contribution provided by physiological signs. The aim of this paper is to investigate how changes in the autonomic nervous system activity can be correlated with clinical mood swings. More specifically, a group of ten bipolar patients underwent an emotional elicitation protocol to investigate the autonomic nervous system dynamics, through the electrodermal activity (EDA), among different mood states. In addition, a control group of ten healthy subjects were recruited and underwent the same protocol. Physiological signals were analyzed by applying the deconvolutive method to reconstruct EDA tonic and phasic components, from which several significant features were extracted to quantify the sympathetic activation. Experimental results performed on both the healthy subjects and the bipolar patients supported the hypothesis of a relationship between autonomic dysfunctions and pathological mood states.
Collapse
|
18
|
Valenza G, Citi L, Gentili C, Lanata A, Scilingo EP, Barbieri R. Characterization of Depressive States in Bipolar Patients Using Wearable Textile Technology and Instantaneous Heart Rate Variability Assessment. IEEE J Biomed Health Inform 2015; 19:263-74. [DOI: 10.1109/jbhi.2014.2307584] [Citation(s) in RCA: 49] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
|
19
|
Lanata A, Valenza G, Nardelli M, Gentili C, Scilingo EP. Complexity Index From a Personalized Wearable Monitoring System for Assessing Remission in Mental Health. IEEE J Biomed Health Inform 2015; 19:132-9. [DOI: 10.1109/jbhi.2014.2360711] [Citation(s) in RCA: 111] [Impact Index Per Article: 11.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
|
20
|
Betella A, Zucca R, Cetnarski R, Greco A, Lanatà A, Mazzei D, Tognetti A, Arsiwalla XD, Omedas P, De Rossi D, Verschure PFMJ. Inference of human affective states from psychophysiological measurements extracted under ecologically valid conditions. Front Neurosci 2014; 8:286. [PMID: 25309310 PMCID: PMC4173664 DOI: 10.3389/fnins.2014.00286] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2014] [Accepted: 08/22/2014] [Indexed: 11/24/2022] Open
Abstract
Compared to standard laboratory protocols, the measurement of psychophysiological signals in real world experiments poses technical and methodological challenges due to external factors that cannot be directly controlled. To address this problem, we propose a hybrid approach based on an immersive and human accessible space called the eXperience Induction Machine (XIM), that incorporates the advantages of a laboratory within a life-like setting. The XIM integrates unobtrusive wearable sensors for the acquisition of psychophysiological signals suitable for ambulatory emotion research. In this paper, we present results from two different studies conducted to validate the XIM as a general-purpose sensing infrastructure for the study of human affective states under ecologically valid conditions. In the first investigation, we recorded and classified signals from subjects exposed to pictorial stimuli corresponding to a range of arousal levels, while they were free to walk and gesticulate. In the second study, we designed an experiment that follows the classical conditioning paradigm, a well-known procedure in the behavioral sciences, with the additional feature that participants were free to move in the physical space, as opposed to similar studies measuring physiological signals in constrained laboratory settings. Our results indicate that, by using our sensing infrastructure, it is indeed possible to infer human event-elicited affective states through measurements of psychophysiological signals under ecological conditions.
Collapse
Affiliation(s)
- Alberto Betella
- Synthetic, Perceptive, Emotive and Cognitive Systems group (SPECS), Universitat Pompeu Fabra Barcelona, Spain
| | - Riccardo Zucca
- Synthetic, Perceptive, Emotive and Cognitive Systems group (SPECS), Universitat Pompeu Fabra Barcelona, Spain
| | - Ryszard Cetnarski
- Synthetic, Perceptive, Emotive and Cognitive Systems group (SPECS), Universitat Pompeu Fabra Barcelona, Spain
| | - Alberto Greco
- Research Centre "E. Piaggio", University of Pisa Pisa, Italy ; Information Engineering Department, University of Pisa Pisa, Italy
| | - Antonio Lanatà
- Research Centre "E. Piaggio", University of Pisa Pisa, Italy ; Information Engineering Department, University of Pisa Pisa, Italy
| | - Daniele Mazzei
- Research Centre "E. Piaggio", University of Pisa Pisa, Italy
| | - Alessandro Tognetti
- Research Centre "E. Piaggio", University of Pisa Pisa, Italy ; Information Engineering Department, University of Pisa Pisa, Italy
| | - Xerxes D Arsiwalla
- Synthetic, Perceptive, Emotive and Cognitive Systems group (SPECS), Universitat Pompeu Fabra Barcelona, Spain
| | - Pedro Omedas
- Synthetic, Perceptive, Emotive and Cognitive Systems group (SPECS), Universitat Pompeu Fabra Barcelona, Spain
| | - Danilo De Rossi
- Research Centre "E. Piaggio", University of Pisa Pisa, Italy ; Information Engineering Department, University of Pisa Pisa, Italy
| | - Paul F M J Verschure
- Synthetic, Perceptive, Emotive and Cognitive Systems group (SPECS), Universitat Pompeu Fabra Barcelona, Spain ; ICREA, Institució Catalana de Recerca i Estudis Avançats Barcelona, Spain
| |
Collapse
|
21
|
Valenza G, Nardelli M, Lanata A, Gentili C, Bertschy G, Paradiso R, Scilingo EP. Wearable Monitoring for Mood Recognition in Bipolar Disorder Based on History-Dependent Long-Term Heart Rate Variability Analysis. IEEE J Biomed Health Inform 2014; 18:1625-35. [DOI: 10.1109/jbhi.2013.2290382] [Citation(s) in RCA: 109] [Impact Index Per Article: 9.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
|
22
|
Valenza G, Citi L, Barbieri R. Estimation of instantaneous complex dynamics through Lyapunov exponents: a study on heartbeat dynamics. PLoS One 2014; 9:e105622. [PMID: 25170911 PMCID: PMC4149483 DOI: 10.1371/journal.pone.0105622] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2014] [Accepted: 07/25/2014] [Indexed: 11/21/2022] Open
Abstract
Measures of nonlinearity and complexity, and in particular the study of Lyapunov exponents, have been increasingly used to characterize dynamical properties of a wide range of biological nonlinear systems, including cardiovascular control. In this work, we present a novel methodology able to effectively estimate the Lyapunov spectrum of a series of stochastic events in an instantaneous fashion. The paradigm relies on a novel point-process high-order nonlinear model of the event series dynamics. The long-term information is taken into account by expanding the linear, quadratic, and cubic Wiener-Volterra kernels with the orthonormal Laguerre basis functions. Applications to synthetic data such as the Hénon map and Rössler attractor, as well as two experimental heartbeat interval datasets (i.e., healthy subjects undergoing postural changes and patients with severe cardiac heart failure), focus on estimation and tracking of the Instantaneous Dominant Lyapunov Exponent (IDLE). The novel cardiovascular assessment demonstrates that our method is able to effectively and instantaneously track the nonlinear autonomic control dynamics, allowing for complexity variability estimations.
Collapse
Affiliation(s)
- Gaetano Valenza
- Neuroscience Statistics Research Laboratory, Department of Anesthesia, Critical Care & Pain Medicine, Harvard Medical School, Massachusetts General Hospital, Boston, Massachusetts, United States of America; and Department of Brain and Cognitive Science, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America
- Research Center E. Piaggio and Department of Information Engineering, University of Pisa, Pisa, Italy
- * E-mail:
| | - Luca Citi
- Neuroscience Statistics Research Laboratory, Department of Anesthesia, Critical Care & Pain Medicine, Harvard Medical School, Massachusetts General Hospital, Boston, Massachusetts, United States of America; and Department of Brain and Cognitive Science, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America
- School of Computer Science and Electronic Engineering, University of Essex, Colchester, United Kingdom
| | - Riccardo Barbieri
- Neuroscience Statistics Research Laboratory, Department of Anesthesia, Critical Care & Pain Medicine, Harvard Medical School, Massachusetts General Hospital, Boston, Massachusetts, United States of America; and Department of Brain and Cognitive Science, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America
| |
Collapse
|
23
|
Revealing real-time emotional responses: a personalized assessment based on heartbeat dynamics. Sci Rep 2014; 4:4998. [PMID: 24845973 PMCID: PMC4028901 DOI: 10.1038/srep04998] [Citation(s) in RCA: 73] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2013] [Accepted: 03/04/2014] [Indexed: 11/11/2022] Open
Abstract
Emotion recognition through computational modeling and analysis of physiological signals has been widely investigated in the last decade. Most of the proposed emotion recognition systems require relatively long-time series of multivariate records and do not provide accurate real-time characterizations using short-time series. To overcome these limitations, we propose a novel personalized probabilistic framework able to characterize the emotional state of a subject through the analysis of heartbeat dynamics exclusively. The study includes thirty subjects presented with a set of standardized images gathered from the international affective picture system, alternating levels of arousal and valence. Due to the intrinsic nonlinearity and nonstationarity of the RR interval series, a specific point-process model was devised for instantaneous identification considering autoregressive nonlinearities up to the third-order according to the Wiener-Volterra representation, thus tracking very fast stimulus-response changes. Features from the instantaneous spectrum and bispectrum, as well as the dominant Lyapunov exponent, were extracted and considered as input features to a support vector machine for classification. Results, estimating emotions each 10 seconds, achieve an overall accuracy in recognizing four emotional states based on the circumplex model of affect of 79.29%, with 79.15% on the valence axis, and 83.55% on the arousal axis.
Collapse
|
24
|
Kroupi E, Vesin JM, Ebrahimi T. Implicit affective profiling of subjects based on physiological data coupling. BRAIN-COMPUTER INTERFACES 2014. [DOI: 10.1080/2326263x.2014.912882] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
|
25
|
Valenza G, Lanatá A, Scilingo EP. Improving emotion recognition systems by embedding cardiorespiratory coupling. Physiol Meas 2013; 34:449-64. [PMID: 23524596 DOI: 10.1088/0967-3334/34/4/449] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
This work aims at showing improved performances of an emotion recognition system embedding information gathered from cardiorespiratory (CR) coupling. Here, we propose a novel methodology able to robustly identify up to 25 regions of a two-dimensional space model, namely the well-known circumplex model of affect (CMA). The novelty of embedding CR coupling information in an autonomic nervous system-based feature space better reveals the sympathetic activations upon emotional stimuli. A CR synchrogram analysis was used to quantify such a coupling in terms of number of heartbeats per respiratory period. Physiological data were gathered from 35 healthy subjects emotionally elicited by means of affective pictures of the international affective picture system database. In this study, we finely detected five levels of arousal and five levels of valence as well as the neutral state, whose combinations were used for identifying 25 different affective states in the CMA plane. We show that the inclusion of the bivariate CR measures in a previously developed system based only on monovariate measures of heart rate variability, respiration dynamics and electrodermal response dramatically increases the recognition accuracy of a quadratic discriminant classifier, obtaining more than 90% of correct classification per class. Finally, we propose a comprehensive description of the CR coupling during sympathetic elicitation adapting an existing theoretical nonlinear model with external driving. The theoretical idea behind this model is that the CR system is comprised of weakly coupled self-sustained oscillators that, when exposed to an external perturbation (i.e. sympathetic activity), becomes synchronized and less sensible to input variations. Given the demonstrated role of the CR coupling, this model can constitute a general tool which is easily embedded in other model-based emotion recognition systems.
Collapse
Affiliation(s)
- Gaetano Valenza
- Department of Information Engineering and Research Center E. Piaggio, Faculty of Engineering, University of Pisa, Via G Caruso 16, I-56122 Pisa, Italy.
| | | | | |
Collapse
|
26
|
Kroupi E, Vesin JM, Ebrahimi T. Driver-response relationships between frontal EEG and respiration during affective audiovisual stimuli. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2013; 2013:2911-2914. [PMID: 24110336 DOI: 10.1109/embc.2013.6610149] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
The complementary nature and the coordinative tendencies of brain and body are essential to the way humans function. Although static features from brain and body signals have been shown to reflect emotions, the dynamic interrelation of the two systems during emotional processes is still in its infancy. This study aims at investigating the way brain signals captured by Electroencephalography (EEG) and bodily responses reflected in respiration interact when watching music clips. A non-linear measure is applied to frontal EEG and respiration to determine the driver/driven relationship between these two modalities. The results reveal a unidirectional dependence from respiration to EEG which adds evidence to the bodily-feedback theory.
Collapse
|