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Sheagren CD, Shadafny N, Escartin T, Casas MT, Cheung CC, Roifman I, Wright GA. Cardiac Function Evaluation in Healthy Volunteers and Patients with Implantable Cardioverter-Defibrillators using High-Bandwidth Spoiled Gradient-Echo Cine. J Cardiovasc Magn Reson 2025:101893. [PMID: 40220902 DOI: 10.1016/j.jocmr.2025.101893] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2025] [Revised: 03/28/2025] [Accepted: 04/04/2025] [Indexed: 04/14/2025] Open
Abstract
BACKGROUND Implantable cardioverter-defibrillators (ICDs) cause banding artifacts around areas of B0 inhomogeneity in conventional steady-state free precession (SSFP) cine sequences. Alternatively, high-bandwidth gradient-echo (GRE) cine sequences can be used to minimize artifacts in the myocardium. In this study, we assessed the bias and interobserver variability in cardiac volumes and ejection fractions between GRE cines in acquired in the presence of ICDS and ground-truth SSFP cines (without ICDs present) in a population of healthy volunteers. Further, a small cohort of ICD patients were recruited and scanned to demonstrate clinical feasibility. METHODS High-bandwidth GRE cine was performed in eleven healthy volunteers with taped ICDs mimicking clinical implants. After the ICD was removed, ground-truth SSFP cine was performed. Two observers separately assessed image quality metrics and contoured the cine images to return cardiac volumes and ejection fractions. Nine patients with an ICD were also scanned with the GRE cine protocol before contrast administration; data was contoured by two observers and analyzed for interobserver agreement. RESULTS In the healthy volunteer dataset, no statistically significant differences were found when comparing volumes or ejection fractions between sequences (p > 0.05). Statistically significant differences were found when comparing RVEF (p = 0.009) and RVESV (p = 0.029) between observers, with no other significant interobserver differences. The interobserver variability of patient LVEF and RVEF data was 3-4%, with lower image quality metrics for patient scans than volunteer scans. CONCLUSION GRE cine imaging in healthy volunteers with taped ICDs demonstrated good agreement with SSFP cine, but increased interobserver variability. In patients, reducing the breath-hold duration caused a decrease in image quality, with GRE cine imaging in patients with ICDs demonstrating poorer image quality and greater interobserver variability than in healthy volunteer studies. Future work is needed to improve GRE cine image quality in patients with ICDs to reduce interobserver variability and improve clinical confidence.
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Affiliation(s)
- Calder D Sheagren
- Department of Medical Biophysics, University of Toronto, 101 College St, Toronto, M5G 1L7, ON, Canada; Physical Sciences Platform, Sunnybrook Research Institute, 2075 Bayview Ave, Toronto, M4N 3M5, ON, Canada
| | - Nasim Shadafny
- Schulich Heart Research Program, Sunnybrook Health Sciences Centre, 2075 Bayview Ave, Toronto, M4N 3M5, ON, Canada
| | - Terenz Escartin
- Department of Medical Biophysics, University of Toronto, 101 College St, Toronto, M5G 1L7, ON, Canada; Physical Sciences Platform, Sunnybrook Research Institute, 2075 Bayview Ave, Toronto, M4N 3M5, ON, Canada
| | - Maria Terricabras Casas
- Schulich Heart Research Program, Sunnybrook Health Sciences Centre, 2075 Bayview Ave, Toronto, M4N 3M5, ON, Canada
| | - Christopher C Cheung
- Schulich Heart Research Program, Sunnybrook Health Sciences Centre, 2075 Bayview Ave, Toronto, M4N 3M5, ON, Canada
| | - Idan Roifman
- Schulich Heart Research Program, Sunnybrook Health Sciences Centre, 2075 Bayview Ave, Toronto, M4N 3M5, ON, Canada
| | - Graham A Wright
- Department of Medical Biophysics, University of Toronto, 101 College St, Toronto, M5G 1L7, ON, Canada; Physical Sciences Platform, Sunnybrook Research Institute, 2075 Bayview Ave, Toronto, M4N 3M5, ON, Canada
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Zhang H, Ma Q, Qiu Y, Lai Z. ACGRHA-Net: Accelerated multi-contrast MR imaging with adjacency complementary graph assisted residual hybrid attention network. Neuroimage 2024; 303:120921. [PMID: 39521395 DOI: 10.1016/j.neuroimage.2024.120921] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2024] [Revised: 11/04/2024] [Accepted: 11/06/2024] [Indexed: 11/16/2024] Open
Abstract
Multi-contrast magnetic resonance (MR) imaging is an advanced technology used in medical diagnosis, but the long acquisition process can lead to patient discomfort and limit its broader application. Shortening acquisition time by undersampling k-space data introduces noticeable aliasing artifacts. To address this, we propose a method that reconstructs multi-contrast MR images from zero-filled data by utilizing a fully-sampled auxiliary contrast MR image as a prior to learn an adjacency complementary graph. This graph is then combined with a residual hybrid attention network, forming the adjacency complementary graph assisted residual hybrid attention network (ACGRHA-Net) for multi-contrast MR image reconstruction. Specifically, the optimal structural similarity is represented by a graph learned from the fully sampled auxiliary image, where the node features and adjacency matrices are designed to precisely capture structural information among different contrast images. This structural similarity enables effective fusion with the target image, improving the detail reconstruction. Additionally, a residual hybrid attention module is designed in parallel with the graph convolution network, allowing it to effectively capture key features and adaptively emphasize these important features in target contrast MR images. This strategy prioritizes crucial information while preserving shallow features, thereby achieving comprehensive feature fusion at deeper levels to enhance multi-contrast MR image reconstruction. Extensive experiments on the different datasets, using various sampling patterns and accelerated factors demonstrate that the proposed method outperforms the current state-of-the-art reconstruction methods.
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Affiliation(s)
- Haotian Zhang
- School of Ocean Information Engineering, Jimei University, Xiamen, China
| | - Qiaoyu Ma
- School of Ocean Information Engineering, Jimei University, Xiamen, China
| | - Yiran Qiu
- School of Ocean Information Engineering, Jimei University, Xiamen, China
| | - Zongying Lai
- School of Ocean Information Engineering, Jimei University, Xiamen, China.
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Tian J, Xiao C, Zhu H. Isotropic Brain MRI Reconstruction from Orthogonal Scans Using 3D Convolutional Neural Network. SENSORS (BASEL, SWITZERLAND) 2024; 24:6639. [PMID: 39460119 PMCID: PMC11510828 DOI: 10.3390/s24206639] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2024] [Revised: 09/04/2024] [Accepted: 10/10/2024] [Indexed: 10/28/2024]
Abstract
As an alternative to true isotropic 3D imaging, image super-resolution (SR) has been applied to reconstruct an isotropic 3D volume from multiple anisotropic scans. However, traditional SR methods struggle with inadequate performance, prolonged processing times, and the necessity for manual feature extraction. Motivated by the exceptional representational ability and automatic feature extraction of convolutional neural networks (CNNs), in this work, we present an end-to-end isotropic MRI reconstruction strategy based on deep learning. The proposed method is based on 3D convolutional neural networks (3D CNNs), which can effectively capture the 3D structural features of MRI volumes and accurately predict potential structure. In addition, the proposed method takes multiple orthogonal scans as input and thus enables the model to use more complementary information from different dimensions for precise inference. Experimental results show that the proposed algorithm achieves promising performance in terms of both quantitative and qualitative assessments. In addition, it can process a 3D volume with a size of 256 × 256 × 256 in less than 1 min with the support of an NVIDIA GeForce GTX 1080Ti GPU, which suggests that it is not only a quantitatively superior method but also a practical one.
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Affiliation(s)
- Jinsha Tian
- School of Big Data and Artificial Intelligence, Chengdu Technological University, Chengdu 611730, China;
| | - Canjun Xiao
- School of Big Data and Artificial Intelligence, Chengdu Technological University, Chengdu 611730, China;
- Digital Twin Laboratory, Chengdu Technological University, Chengdu 611730, China
| | - Hongjin Zhu
- School of Big Data and Artificial Intelligence, Chengdu Technological University, Chengdu 611730, China;
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Yao H, Jia B, Pan X, Sun J. Validation and Feasibility of Ultrafast Cervical Spine MRI Using a Deep Learning-Assisted 3D Iterative Image Enhancement System. J Multidiscip Healthc 2024; 17:2499-2509. [PMID: 38799011 PMCID: PMC11128255 DOI: 10.2147/jmdh.s465002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2024] [Accepted: 05/13/2024] [Indexed: 05/29/2024] Open
Abstract
Purpose This study aimed to evaluate the feasibility of ultrafast (2 min) cervical spine MRI protocol using a deep learning-assisted 3D iterative image enhancement (DL-3DIIE) system, compared to a conventional MRI protocol (6 min 14s). Patients and Methods Fifty-one patients were recruited and underwent cervical spine MRI using conventional and ultrafast protocols. A DL-3DIIE system was applied to the ultrafast protocol to compensate for the spatial resolution and signal-to-noise ratio (SNR) of images. Two radiologists independently assessed and graded the quality of images from the dimensions of artifacts, boundary sharpness, visibility of lesions and overall image quality. We recorded the presence or absence of different pathologies. Moreover, we examined the interchangeability of the two protocols by computing the 95% confidence interval of the individual equivalence index, and also evaluated the inter-protocol intra-observer agreement using Cohen's weighted kappa. Results Ultrafast-DL-3DIIE images were significantly better than conventional ones for artifacts and equivalent for other qualitative features. The number of cases with different kinds of pathologies was indistinguishable based on the MR images from ultrafast-DL-3DIIE and conventional protocols. With the exception of disc degeneration, the 95% confidence interval for the individual equivalence index across all variables did not surpass 5%, suggesting that the two protocols are interchangeable. The kappa values of these evaluations by the two radiologists ranged from 0.65 to 0.88, indicating good-to-excellent agreement. Conclusion The DL-3DIIE system enables 67% spine MRI scan time reduction while obtaining at least equivalent image quality and diagnostic results compared to the conventional protocol, suggesting its potential for clinical utility.
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Affiliation(s)
- Hui Yao
- Department of Radiology, West China Hospital of Sichuan University, Chengdu, 610041, People’s Republic of China
| | - Bangsheng Jia
- Department of Radiology, West China Hospital of Sichuan University, Chengdu, 610041, People’s Republic of China
| | - Xuelin Pan
- Department of Radiology, West China Hospital of Sichuan University, Chengdu, 610041, People’s Republic of China
| | - Jiayu Sun
- Department of Radiology, West China Hospital of Sichuan University, Chengdu, 610041, People’s Republic of China
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Upendra RR, Linte CA. A 3D Convolutional Neural Network with Gradient Guidance for Image Super-Resolution of Late Gadolinium Enhanced Cardiac MRI. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2022; 2022:1707-1710. [PMID: 36086376 PMCID: PMC10161146 DOI: 10.1109/embc48229.2022.9871783] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/07/2023]
Abstract
In this paper, we describe a 3D convolutional neural network (CNN) framework to compute and generate super-resolution late gadolinium enhanced (LGE) cardiac magnetic resonance imaging (MRI) images. The proposed CNN framework consists of two branches: a super-resolution branch with a 3D dense deep back-projection network (DBPN) as the backbone to learn the mapping of low-resolution LGE cardiac volumes to high-resolution LGE cardiac volumes, and a gradient branch that learns the mapping of the gradient map of low resolution LGE cardiac volumes to the gradient map of their high-resolution counterparts. The gradient branch of the CNN provides additional cardiac structure information to the super-resolution branch to generate structurally more accurate super-resolution LGE MRI images. We conducted our experiments on the 2018 atrial segmentation challenge dataset. The proposed CNN framework achieved a mean peak signal-to-noise ratio (PSNR) of 30.91 and 25.66 and a mean structural similarity index measure (SSIM) of 0.91 and 0.75 on training the model on low-resolution images downsamp led by a scale factor of 2 and 4, respectively.
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Magnetic Resonance Imaging Image Feature Analysis Algorithm under Convolutional Neural Network in the Diagnosis and Risk Stratification of Prostate Cancer. JOURNAL OF HEALTHCARE ENGINEERING 2021; 2021:1034661. [PMID: 34873435 PMCID: PMC8643240 DOI: 10.1155/2021/1034661] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/23/2021] [Revised: 10/30/2021] [Accepted: 11/03/2021] [Indexed: 12/03/2022]
Abstract
This work aimed to explore the accuracy of magnetic resonance imaging (MRI) images based on the convolutional neural network (CNN) algorithm in the diagnosis of prostate cancer patients and tumor risk grading. A total of 89 patients with prostate cancer and benign prostatic hyperplasia diagnosed by MRI examination and pathological examination in hospital were selected as the research objects in this study (they passed the exclusion criteria). The MRI images of these patients were collected in two groups and divided into two groups before and after treatment according to whether the CNN algorithm was used to process them. The number of diagnosed diseases and the number of cases of risk level inferred based on the tumor grading were compared to observe which group was closer to the diagnosis of pathological biopsy. Through comparative analysis, compared with the positive rate of pathological diagnosis (44%), the positive rate after the treatment of the CNN algorithm (42%) was more similar to that before the treatment (34%), and the comparison was statistically marked (P < 0.05). In terms of risk stratification, the grading results after treatment (37 cases) were closer to the results of pathological grading (39 cases) than those before treatment (30 cases), and the comparison was statistically obvious (P < 0.05). In addition, it was obvious that the MRT images would be clearer after treatment through the observation of the MRT images before and after treatment. In conclusion, MRI image segmentation algorithm based on CNN was more accurate in the diagnosis and risk stratification of prostate cancer than routine MRI. According to the evaluation of Dice similarity coefficient (DSC) and Hausdorff I distance (HD), the CNN segmentation method used in this study was more perfect than other segmentation methods.
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Bustin A, Sridi S, Gravinay P, Legghe B, Gosse P, Ouattara A, Rozé H, Coste P, Gerbaud E, Desclaux A, Boyer A, Prevel R, Gruson D, Bonnet F, Issa N, Montaudon M, Laurent F, Stuber M, Camou F, Cochet H. High-resolution Free-breathing late gadolinium enhancement Cardiovascular magnetic resonance to diagnose myocardial injuries following COVID-19 infection. Eur J Radiol 2021; 144:109960. [PMID: 34600236 PMCID: PMC8450147 DOI: 10.1016/j.ejrad.2021.109960] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2021] [Revised: 08/30/2021] [Accepted: 09/15/2021] [Indexed: 12/14/2022]
Abstract
PURPOSE High-resolution free-breathing late gadolinium enhancement (HR-LGE) was shown valuable for the diagnosis of acute coronary syndromes with non-obstructed coronary arteries. The method may be useful to detect COVID-related myocardial injuries but is hampered by prolonged acquisition times. We aimed to introduce an accelerated HR-LGE technique for the diagnosis of COVID-related myocardial injuries. METHOD An undersampled navigator-gated HR-LGE (acquired resolution of 1.25 mm3) sequence combined with advanced patch-based low-rank reconstruction was developed and validated in a phantom and in 23 patients with structural heart disease (test cohort; 15 men; 55 ± 16 years). Twenty patients with laboratory-confirmed COVID-19 infection associated with troponin rise (COVID cohort; 15 men; 46 ± 24 years) prospectively underwent cardiovascular magnetic resonance (CMR) with the proposed sequence in our center. Image sharpness, quality, signal intensity differences and diagnostic value of free-breathing HR-LGE were compared against conventional breath-held low-resolution LGE (LR-LGE, voxel size 1.8x1.4x6mm). RESULTS Structures sharpness in the phantom showed no differences with the fully sampled image up to an undersampling factor of x3.8 (P > 0.5). In patients (N = 43), this acceleration allowed for acquisition times of 7min21s ± 1min12s at 1.25 mm3 resolution. Compared with LR-LGE, HR-LGE showed higher image quality (P = 0.03) and comparable signal intensity differences (P > 0.5). In patients with structural heart disease, all LGE-positive segments on LR-LGE were also detected on HR-LGE (80/391) with 21 additional enhanced segments visible only on HR-LGE (101/391, P < 0.001). In 4 patients with COVID-19 history, HR-LGE was definitely positive while LR-LGE was either definitely negative (1 microinfarction and 1 myocarditis) or inconclusive (2 myocarditis). CONCLUSIONS Undersampled free-breathing isotropic HR-LGE can detect additional areas of late enhancement as compared to conventional breath-held LR-LGE. In patients with history of COVID-19 infection associated with troponin rise, the method allows for detailed characterization of myocardial injuries in acceptable scan times and without the need for repeated breath holds.
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Affiliation(s)
- Aurélien Bustin
- Department of Cardiovascular Imaging, Groupe Hospitalier Sud, CHU Bordeaux, Pessac, France; IHU LIRYC, Electrophysiology and Heart Modeling Institute, Université de Bordeaux - INSERM U1045, Avenue du Haut Lévêque, Pessac, France; Department of Diagnostic and Interventional Radiology, Lausanne University Hospital and University of Lausanne, Lausanne, Switzerland.
| | - Soumaya Sridi
- Department of Cardiovascular Imaging, Groupe Hospitalier Sud, CHU Bordeaux, Pessac, France
| | - Pierre Gravinay
- Cardiac Intensive Care Unit, Hôpital St André, CHU Bordeaux, Bordeaux, France
| | - Benoit Legghe
- Department of Cardiovascular Imaging, Groupe Hospitalier Sud, CHU Bordeaux, Pessac, France
| | - Philippe Gosse
- Cardiac Intensive Care Unit, Hôpital St André, CHU Bordeaux, Bordeaux, France
| | - Alexandre Ouattara
- Department of Anaesthesia and Critical Care, Groupe Hospitalier Sud, CHU Bordeaux, Pessac, France
| | - Hadrien Rozé
- Department of Anaesthesia and Critical Care, Groupe Hospitalier Sud, CHU Bordeaux, Pessac, France
| | - Pierre Coste
- Cardiac Intensive Care Unit, Groupe Hospitalier Sud, CHU de Bordeaux, Pessac, France
| | - Edouard Gerbaud
- Cardiac Intensive Care Unit, Groupe Hospitalier Sud, CHU de Bordeaux, Pessac, France
| | - Arnaud Desclaux
- Infectious disease Unit, Hôpital Pellegrin, CHU Bordeaux, Bordeaux, France
| | - Alexandre Boyer
- Medical Intensive Care Unit, Hôpital Pellegrin, CHU Bordeaux, Bordeaux, France
| | - Renaud Prevel
- Medical Intensive Care Unit, Hôpital Pellegrin, CHU Bordeaux, Bordeaux, France
| | - Didier Gruson
- Medical Intensive Care Unit, Hôpital Pellegrin, CHU Bordeaux, Bordeaux, France
| | - Fabrice Bonnet
- Infectious Disease Unit, Hôpital St André, CHU Bordeaux, Bordeaux, France
| | - Nahema Issa
- Intensive Care Unit, Hôpital St André, CHU Bordeaux, Bordeaux, France
| | - Michel Montaudon
- Department of Cardiovascular Imaging, Groupe Hospitalier Sud, CHU Bordeaux, Pessac, France
| | - François Laurent
- Department of Cardiovascular Imaging, Groupe Hospitalier Sud, CHU Bordeaux, Pessac, France
| | - Matthias Stuber
- IHU LIRYC, Electrophysiology and Heart Modeling Institute, Université de Bordeaux - INSERM U1045, Avenue du Haut Lévêque, Pessac, France; Department of Diagnostic and Interventional Radiology, Lausanne University Hospital and University of Lausanne, Lausanne, Switzerland; CIBM Center for Biomedical Imaging, Lausanne, Switzerland
| | - Fabrice Camou
- Intensive Care Unit, Hôpital St André, CHU Bordeaux, Bordeaux, France
| | - Hubert Cochet
- Department of Cardiovascular Imaging, Groupe Hospitalier Sud, CHU Bordeaux, Pessac, France; IHU LIRYC, Electrophysiology and Heart Modeling Institute, Université de Bordeaux - INSERM U1045, Avenue du Haut Lévêque, Pessac, France
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Upendra RR, Simon R, Linte CA. A Deep Learning Framework for Image Super-Resolution for Late Gadolinium Enhanced Cardiac MRI. COMPUTING IN CARDIOLOGY 2021; 48:10.23919/cinc53138.2021.9662790. [PMID: 35662880 PMCID: PMC9161679 DOI: 10.23919/cinc53138.2021.9662790] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Cardiac magnetic resonance imaging (MRI) provides 3D images with high-resolution in-plane information, however, they are known to have low through-plane resolution due to the trade-off between resolution, image acquisition time and signal-to-noise ratio. This results in anisotropic 3D images which could lead to difficulty in diagnosis, especially in late gadolinium enhanced (LGE) cardiac MRI, which is the reference imaging modality for locating the extent of myocardial fibrosis in various cardiovascular diseases like myocardial infarction and atrial fibrillation. To address this issue, we propose a self-supervised deep learning-based approach to enhance the through-plane resolution of the LGE MRI images. We train a convolutional neural network (CNN) model on randomly extracted patches of short-axis LGE MRI images and this trained CNN model is used to leverage the information learnt from the high-resolution in-plane data to improve the through-plane resolution. We conducted experiments on LGE MRI dataset made available through the 2018 atrial segmentation challenge. Our proposed method achieved a mean peak signal-to-noise-ratio (PSNR) of 36.99 and 35.92 and a mean structural similarity index measure (SSIM) of 0.9 and 0.84 on training the CNN model using low-resolution images downsampled by a scale factor of 2 and 4, respectively.
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Affiliation(s)
- Roshan Reddy Upendra
- Chester F. Carlson Center for Imaging Science, Rochester Institute of Technology, Rochester, NY, USA
| | - Richard Simon
- Biomedical Engineering, Rochester Institute of Technology, Rochester, NY, USA
| | - Cristian A Linte
- Chester F. Carlson Center for Imaging Science, Rochester Institute of Technology, Rochester, NY, USA
- Biomedical Engineering, Rochester Institute of Technology, Rochester, NY, USA
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Liu X, Wang J, Lin S, Crozier S, Liu F. Optimizing multicontrast MRI reconstruction with shareable feature aggregation and selection. NMR IN BIOMEDICINE 2021; 34:e4540. [PMID: 33974306 DOI: 10.1002/nbm.4540] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/27/2020] [Revised: 04/05/2021] [Accepted: 04/25/2021] [Indexed: 06/12/2023]
Abstract
This paper proposes a new method for optimizing feature sharing in deep neural network-based, rapid, multicontrast magnetic resonance imaging (MC-MRI). Using the shareable information of MC images for accelerated MC-MRI reconstruction, current algorithms stack the MC images or features without optimizing the sharing protocols, leading to suboptimal reconstruction results. In this paper, we propose a novel feature aggregation and selection scheme in a deep neural network to better leverage the MC features and improve the reconstruction results. First, we propose to extract and use the shareable information by mapping the MC images into multiresolution feature maps with multilevel layers of the neural network. In this way, the extracted features capture complementary image properties, including local patterns from the shallow layers and semantic information from the deep layers. Then, an explicit selection module is designed to compile the extracted features optimally. That is, larger weights are learned to incorporate the constructive, shareable features; and smaller weights are assigned to the unshareable information. We conduct comparative studies on publicly available T2-weighted and T2-weighted fluid attenuated inversion recovery brain images, and the results show that the proposed network consistently outperforms existing algorithms. In addition, the proposed method can recover the images with high fidelity under 16 times acceleration. The ablation studies are conducted to evaluate the effectiveness of the proposed feature aggregation and selection mechanism. The results and the visualization of the weighted features show that the proposed method does effectively improve the usage of the useful features and suppress useless information, leading to overall enhanced reconstruction results. Additionally, the selection module can zero-out repeated and redundant features and improve network efficiency.
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Affiliation(s)
- Xinwen Liu
- School of Information Technology and Electrical Engineering, The University of Queensland, Brisbane, Australia
| | - Jing Wang
- School of Information and Communication Technology, Griffith University, Brisbane, Australia
| | - Suzhen Lin
- School of Data Science and Technology, North University of China, Taiyuan, China
- The Key Laboratory of Biomedical Imaging and Big Data Processing in Shanxi Province, Shanxi, China
| | - Stuart Crozier
- School of Information Technology and Electrical Engineering, The University of Queensland, Brisbane, Australia
| | - Feng Liu
- School of Information Technology and Electrical Engineering, The University of Queensland, Brisbane, Australia
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A multi-scale variational neural network for accelerating motion-compensated whole-heart 3D coronary MR angiography. Magn Reson Imaging 2020; 70:155-167. [DOI: 10.1016/j.mri.2020.04.007] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2019] [Revised: 02/03/2020] [Accepted: 04/12/2020] [Indexed: 11/22/2022]
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Bustin A, Rashid I, Cruz G, Hajhosseiny R, Correia T, Neji R, Rajani R, Ismail TF, Botnar RM, Prieto C. 3D whole-heart isotropic sub-millimeter resolution coronary magnetic resonance angiography with non-rigid motion-compensated PROST. J Cardiovasc Magn Reson 2020; 22:24. [PMID: 32299445 PMCID: PMC7161114 DOI: 10.1186/s12968-020-00611-5] [Citation(s) in RCA: 38] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2019] [Accepted: 02/19/2020] [Indexed: 11/13/2022] Open
Abstract
BACKGROUND To enable free-breathing whole-heart sub-millimeter resolution coronary magnetic resonance angiography (CMRA) in a clinically feasible scan time by combining low-rank patch-based undersampled reconstruction (3D-PROST) with a highly accelerated non-rigid motion correction framework. METHODS Non-rigid motion corrected CMRA combined with 2D image-based navigators has been previously proposed to enable 100% respiratory scan efficiency in modestly undersampled acquisitions. Achieving sub-millimeter isotropic resolution with such techniques still requires prohibitively long acquisition times. We propose to combine 3D-PROST reconstruction with a highly accelerated non-rigid motion correction framework to achieve sub-millimeter resolution CMRA in less than 10 min. Ten healthy subjects and eight patients with suspected coronary artery disease underwent 4-5-fold accelerated free-breathing whole-heart CMRA with 0.9 mm3 isotropic resolution. Vessel sharpness, vessel length and image quality obtained with the proposed non-rigid (NR) PROST approach were compared against translational correction only (TC-PROST) and a previously proposed NR motion-compensated technique (non-rigid SENSE) in healthy subjects. For the patient study, image quality scoring and visual comparison with coronary computed tomography angiography (CCTA) were performed. RESULTS Average scan times [min:s] were 6:01 ± 0:59 (healthy subjects) and 8:29 ± 1:41 (patients). In healthy subjects, vessel sharpness of the left anterior descending (LAD) and right (RCA) coronary arteries were improved with the proposed non-rigid PROST (LAD: 51.2 ± 8.8%, RCA: 61.2 ± 9.1%) in comparison to TC-PROST (LAD: 43.8 ± 5.1%, P = 0.051, RCA: 54.3 ± 8.3%, P = 0.218) and non-rigid SENSE (LAD: 46.1 ± 5.8%, P = 0.223, RCA: 56.7 ± 9.6%, P = 0.50), although differences were not statistically significant. The average visual image quality score was significantly higher for NR-PROST (LAD: 3.2 ± 0.6, RCA: 3.3 ± 0.7) compared with TC-PROST (LAD: 2.1 ± 0.6, P = 0.018, RCA: 2.0 ± 0.7, P = 0.014) and non-rigid SENSE (LAD: 2.3 ± 0.5, P = 0.008, RCA: 2.5 ± 0.7, P = 0.016). In patients, the proposed approach showed good delineation of the coronaries, in agreement with CCTA, with image quality scores and vessel sharpness similar to that of healthy subjects. CONCLUSIONS We demonstrate the feasibility of combining high undersampling factors with non-rigid motion-compensated reconstruction to obtain high-quality sub-millimeter isotropic CMRA images in ~ 8 min. Validation in a larger cohort of patients with coronary artery disease is now warranted.
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Affiliation(s)
- Aurélien Bustin
- Department of Biomedical Engineering, School of Biomedical Engineering and Imaging Sciences, King's College London, St Thomas' Hospital, 3rd Floor, Lambeth Wing, London, SE1 7EH, UK
| | - Imran Rashid
- Department of Biomedical Engineering, School of Biomedical Engineering and Imaging Sciences, King's College London, St Thomas' Hospital, 3rd Floor, Lambeth Wing, London, SE1 7EH, UK
| | - Gastao Cruz
- Department of Biomedical Engineering, School of Biomedical Engineering and Imaging Sciences, King's College London, St Thomas' Hospital, 3rd Floor, Lambeth Wing, London, SE1 7EH, UK
| | - Reza Hajhosseiny
- Department of Biomedical Engineering, School of Biomedical Engineering and Imaging Sciences, King's College London, St Thomas' Hospital, 3rd Floor, Lambeth Wing, London, SE1 7EH, UK
- National Heart and Lung Institute, Imperial College London, London, UK
| | - Teresa Correia
- Department of Biomedical Engineering, School of Biomedical Engineering and Imaging Sciences, King's College London, St Thomas' Hospital, 3rd Floor, Lambeth Wing, London, SE1 7EH, UK
| | - Radhouene Neji
- Department of Biomedical Engineering, School of Biomedical Engineering and Imaging Sciences, King's College London, St Thomas' Hospital, 3rd Floor, Lambeth Wing, London, SE1 7EH, UK
- MR Research Collaborations, Siemens Healthcare Limited, Frimley, UK
| | - Ronak Rajani
- Department of Biomedical Engineering, School of Biomedical Engineering and Imaging Sciences, King's College London, St Thomas' Hospital, 3rd Floor, Lambeth Wing, London, SE1 7EH, UK
- Department of Cardiology, Guy's & St Thomas' Hospitals, London, UK
| | - Tevfik F Ismail
- Department of Biomedical Engineering, School of Biomedical Engineering and Imaging Sciences, King's College London, St Thomas' Hospital, 3rd Floor, Lambeth Wing, London, SE1 7EH, UK
| | - René M Botnar
- Department of Biomedical Engineering, School of Biomedical Engineering and Imaging Sciences, King's College London, St Thomas' Hospital, 3rd Floor, Lambeth Wing, London, SE1 7EH, UK.
- Escuela de Ingeniería, Pontificia Universidad Católica de Chile, Santiago, Chile.
| | - Claudia Prieto
- Department of Biomedical Engineering, School of Biomedical Engineering and Imaging Sciences, King's College London, St Thomas' Hospital, 3rd Floor, Lambeth Wing, London, SE1 7EH, UK
- Escuela de Ingeniería, Pontificia Universidad Católica de Chile, Santiago, Chile
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12
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Bustin A, Milotta G, Ismail TF, Neji R, Botnar RM, Prieto C. Accelerated free-breathing whole-heart 3D T 2 mapping with high isotropic resolution. Magn Reson Med 2020; 83:988-1002. [PMID: 31535729 PMCID: PMC6899588 DOI: 10.1002/mrm.27989] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2019] [Revised: 08/07/2019] [Accepted: 08/16/2019] [Indexed: 01/07/2023]
Abstract
PURPOSE To enable free-breathing whole-heart 3D T2 mapping with high isotropic resolution in a clinically feasible and predictable scan time. This 3D motion-corrected undersampled signal matched (MUST) T2 map is achieved by combining an undersampled motion-compensated T2 -prepared Cartesian acquisition with a high-order patch-based reconstruction. METHODS The 3D MUST-T2 mapping acquisition consists of an electrocardiogram-triggered, T2 -prepared, balanced SSFP sequence with nonselective saturation pulses. Three undersampled T2 -weighted volumes are acquired using a 3D Cartesian variable-density sampling with increasing T2 preparation times. A 2D image-based navigator is used to correct for respiratory motion of the heart and allow 100% scan efficiency. Multicontrast high-dimensionality undersampled patch-based reconstruction is used in concert with dictionary matching to generate 3D T2 maps. The proposed framework was evaluated in simulations, phantom experiments, and in vivo (10 healthy subjects, 2 patients) with 1.5-mm3 isotropic resolution. Three-dimensional MUST-T2 was compared against standard multi-echo spin-echo sequence (phantom) and conventional breath-held single-shot 2D SSFP T2 mapping (in vivo). RESULTS Three-dimensional MUST-T2 showed high accuracy in phantom experiments (R2 > 0.99). The precision of T2 values was similar for 3D MUST-T2 and 2D balanced SSFP T2 mapping in vivo (5 ± 1 ms versus 4 ± 2 ms, P = .52). Slightly longer T2 values were observed with 3D MUST-T2 in comparison to 2D balanced SSFP T2 mapping (50.7 ± 2 ms versus 48.2 ± 1 ms, P < .05). Preliminary results in patients demonstrated T2 values in agreement with literature values. CONCLUSION The proposed approach enables free-breathing whole-heart 3D T2 mapping with high isotropic resolution in about 8 minutes, achieving accurate and precise T2 quantification of myocardial tissue in a clinically feasible scan time.
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Affiliation(s)
- Aurélien Bustin
- Department of Biomedical EngineeringSchool of Biomedical Engineering and Imaging SciencesKing's College LondonLondonUnited Kingdom
| | - Giorgia Milotta
- Department of Biomedical EngineeringSchool of Biomedical Engineering and Imaging SciencesKing's College LondonLondonUnited Kingdom
| | - Tevfik F. Ismail
- Department of Biomedical EngineeringSchool of Biomedical Engineering and Imaging SciencesKing's College LondonLondonUnited Kingdom
| | - Radhouene Neji
- Department of Biomedical EngineeringSchool of Biomedical Engineering and Imaging SciencesKing's College LondonLondonUnited Kingdom
- MR Research Collaborations, Siemens HealthcareFrimleyUnited Kingdom
| | - René M. Botnar
- Department of Biomedical EngineeringSchool of Biomedical Engineering and Imaging SciencesKing's College LondonLondonUnited Kingdom
- Escuela de IngenieríaPontificia Universidad Católica de ChileSantiagoChile
| | - Claudia Prieto
- Department of Biomedical EngineeringSchool of Biomedical Engineering and Imaging SciencesKing's College LondonLondonUnited Kingdom
- Escuela de IngenieríaPontificia Universidad Católica de ChileSantiagoChile
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13
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Analysis of the Quantization Noise in Discrete Wavelet Transform Filters for 3D Medical Imaging. APPLIED SCIENCES-BASEL 2020. [DOI: 10.3390/app10041223] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Denoising and compression of 2D and 3D images are important problems in modern medical imaging systems. Discrete wavelet transform (DWT) is used to solve them in practice. We analyze the quantization noise effect in coefficients of DWT filters for 3D medical imaging in this paper. The method for wavelet filters coefficients quantizing is proposed, which allows minimizing resources in hardware implementation by simplifying rounding operations. We develop the method for estimating the maximum error of 3D grayscale and color images DWT with various bits per color (BPC). The dependence of the peak signal-to-noise ratio (PSNR) of the images processing result on wavelet used, the effective bit-width of filters coefficients and BPC is revealed. We derive formulas for determining the minimum bit-width of wavelet filters coefficients that provide a high (PSNR ≥ 40 dB for images with 8 BPC, for example) and maximum (PSNR = ∞ dB) quality of 3D medical imaging by DWT depending on wavelet used. The experiments of 3D tomographic images processing confirmed the accuracy of theoretical analysis. All data are presented in the fixed-point format in the proposed method of 3D medical images DWT. It is making possible efficient, from the point of view of hardware and time resources, the implementation for image denoising and compression on modern devices such as field-programmable gate arrays and application-specific integrated circuits.
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14
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Yu B, Wang Y, Wang L, Shen D, Zhou L. Medical Image Synthesis via Deep Learning. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2020; 1213:23-44. [PMID: 32030661 DOI: 10.1007/978-3-030-33128-3_2] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
Medical images have been widely used in clinics, providing visual representations of under-skin tissues in human body. By applying different imaging protocols, diverse modalities of medical images with unique characteristics of visualization can be produced. Considering the cost of scanning high-quality single modality images or homogeneous multiple modalities of images, medical image synthesis methods have been extensively explored for clinical applications. Among them, deep learning approaches, especially convolutional neural networks (CNNs) and generative adversarial networks (GANs), have rapidly become dominating for medical image synthesis in recent years. In this chapter, based on a general review of the medical image synthesis methods, we will focus on introducing typical CNNs and GANs models for medical image synthesis. Especially, we will elaborate our recent work about low-dose to high-dose PET image synthesis, and cross-modality MR image synthesis, using these models.
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Affiliation(s)
- Biting Yu
- School of Computing and Information Technology, University of Wollongong, Wollongong, NSW, Australia
| | - Yan Wang
- School of Computer Science, Sichuan University, Chengdu, China
| | - Lei Wang
- School of Computing and Information Technology, University of Wollongong, Wollongong, NSW, Australia
| | - Dinggang Shen
- IDEA Lab, Department of Radiology and BRIC, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA
| | - Luping Zhou
- School of Electrical and Information Engineering, University of Sydney, Camperdown, NSW, Australia.
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15
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Yu B, Zhou L, Wang L, Shi Y, Fripp J, Bourgeat P. Ea-GANs: Edge-Aware Generative Adversarial Networks for Cross-Modality MR Image Synthesis. IEEE TRANSACTIONS ON MEDICAL IMAGING 2019; 38:1750-1762. [PMID: 30714911 DOI: 10.1109/tmi.2019.2895894] [Citation(s) in RCA: 101] [Impact Index Per Article: 16.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Magnetic resonance (MR) imaging is a widely used medical imaging protocol that can be configured to provide different contrasts between the tissues in human body. By setting different scanning parameters, each MR imaging modality reflects the unique visual characteristic of scanned body part, benefiting the subsequent analysis from multiple perspectives. To utilize the complementary information from multiple imaging modalities, cross-modality MR image synthesis has aroused increasing research interest recently. However, most existing methods only focus on minimizing pixel/voxel-wise intensity difference but ignore the textural details of image content structure, which affects the quality of synthesized images. In this paper, we propose edge-aware generative adversarial networks (Ea-GANs) for cross-modality MR image synthesis. Specifically, we integrate edge information, which reflects the textural structure of image content and depicts the boundaries of different objects in images, to reduce this gap. Corresponding to different learning strategies, two frameworks are proposed, i.e., a generator-induced Ea-GAN (gEa-GAN) and a discriminator-induced Ea-GAN (dEa-GAN). The gEa-GAN incorporates the edge information via its generator, while the dEa-GAN further does this from both the generator and the discriminator so that the edge similarity is also adversarially learned. In addition, the proposed Ea-GANs are 3D-based and utilize hierarchical features to capture contextual information. The experimental results demonstrate that the proposed Ea-GANs, especially the dEa-GAN, outperform multiple state-of-the-art methods for cross-modality MR image synthesis in both qualitative and quantitative measures. Moreover, the dEa-GAN also shows excellent generality to generic image synthesis tasks on benchmark datasets about facades, maps, and cityscapes.
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16
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Bustin A, Lima da Cruz G, Jaubert O, Lopez K, Botnar RM, Prieto C. High-dimensionality undersampled patch-based reconstruction (HD-PROST) for accelerated multi-contrast MRI. Magn Reson Med 2019; 81:3705-3719. [PMID: 30834594 PMCID: PMC6646908 DOI: 10.1002/mrm.27694] [Citation(s) in RCA: 67] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2018] [Revised: 01/23/2019] [Accepted: 01/23/2019] [Indexed: 12/14/2022]
Abstract
PURPOSE To develop a new high-dimensionality undersampled patch-based reconstruction (HD-PROST) for highly accelerated 2D and 3D multi-contrast MRI. METHODS HD-PROST jointly reconstructs multi-contrast MR images by exploiting the highly redundant information, on a local and non-local scale, and the strong correlation shared between the multiple contrast images. This is achieved by enforcing multi-dimensional low-rank in the undersampled images. 2D magnetic resonance fingerprinting (MRF) phantom and in vivo brain acquisitions were performed to evaluate the performance of HD-PROST for highly accelerated simultaneous T1 and T2 mapping. Additional in vivo experiments for reconstructing multiple undersampled 3D magnetization transfer (MT)-weighted images were conducted to illustrate the impact of HD-PROST for high-resolution multi-contrast 3D imaging. RESULTS In the 2D MRF phantom study, HD-PROST provided accurate and precise estimation of the T1 and T2 values in comparison to gold standard spin echo acquisitions. HD-PROST achieved good quality maps for the in vivo 2D MRF experiments in comparison to conventional low-rank inversion reconstruction. T1 and T2 values of white matter and gray matter were in good agreement with those reported in the literature for MRF acquisitions with reduced number of time point images (500 time point images, ~2.5 s scan time). For in vivo MT-weighted 3D acquisitions (6 different contrasts), HD-PROST achieved similar image quality than the fully sampled reference image for an undersampling factor of 6.5-fold. CONCLUSION HD-PROST enables multi-contrast 2D and 3D MR images in a short acquisition time without compromising image quality. Ultimately, this technique may increase the potential of conventional parameter mapping.
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Affiliation(s)
- Aurélien Bustin
- Department of Biomedical Engineering, School of Imaging Sciences & Biomedical EngineeringKing’s College London, King’s Health PartnersLondonUnited Kingdom
| | - Gastão Lima da Cruz
- Department of Biomedical Engineering, School of Imaging Sciences & Biomedical EngineeringKing’s College London, King’s Health PartnersLondonUnited Kingdom
| | - Olivier Jaubert
- Department of Biomedical Engineering, School of Imaging Sciences & Biomedical EngineeringKing’s College London, King’s Health PartnersLondonUnited Kingdom
| | - Karina Lopez
- Department of Biomedical Engineering, School of Imaging Sciences & Biomedical EngineeringKing’s College London, King’s Health PartnersLondonUnited Kingdom
| | - René M. Botnar
- Department of Biomedical Engineering, School of Imaging Sciences & Biomedical EngineeringKing’s College London, King’s Health PartnersLondonUnited Kingdom
- Escuela de IngenieríaPontificia Universidad Católica de ChileSantiagoChile
| | - Claudia Prieto
- Department of Biomedical Engineering, School of Imaging Sciences & Biomedical EngineeringKing’s College London, King’s Health PartnersLondonUnited Kingdom
- Escuela de IngenieríaPontificia Universidad Católica de ChileSantiagoChile
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Delbany M, Bustin A, Poujol J, Thomassin‐Naggara I, Felblinger J, Vuissoz P, Odille F. One‐millimeter isotropic breast diffusion‐weighted imaging: Evaluation of a superresolution strategy in terms of signal‐to‐noise ratio, sharpness and apparent diffusion coefficient. Magn Reson Med 2018; 81:2588-2599. [DOI: 10.1002/mrm.27591] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2018] [Revised: 10/08/2018] [Accepted: 10/14/2018] [Indexed: 12/24/2022]
Affiliation(s)
- Maya Delbany
- IADI, INSERM U1254 and Université de Lorraine Nancy France
| | - Aurélien Bustin
- School of Biomedical Engineering and Imaging Sciences King’s College London London United Kingdom
| | - Julie Poujol
- IADI, INSERM U1254 and Université de Lorraine Nancy France
| | - Isabelle Thomassin‐Naggara
- Laboratoire de Recherche en Imagerie INSERM Université Paris Descartes, Sorbonne Paris Cité, PARCC UMR 970, Faculté de médecine
| | - Jacques Felblinger
- IADI, INSERM U1254 and Université de Lorraine Nancy France
- CIC‐IT 1433, INSERM, CHRU de Nancy and Université de Lorraine Nancy France
| | | | - Freddy Odille
- IADI, INSERM U1254 and Université de Lorraine Nancy France
- CIC‐IT 1433, INSERM, CHRU de Nancy and Université de Lorraine Nancy France
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18
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Bustin A, Ginami G, Cruz G, Correia T, Ismail TF, Rashid I, Neji R, Botnar RM, Prieto C. Five-minute whole-heart coronary MRA with sub-millimeter isotropic resolution, 100% respiratory scan efficiency, and 3D-PROST reconstruction. Magn Reson Med 2018; 81:102-115. [PMID: 30058252 PMCID: PMC6617822 DOI: 10.1002/mrm.27354] [Citation(s) in RCA: 75] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2018] [Revised: 03/23/2018] [Accepted: 04/19/2018] [Indexed: 01/08/2023]
Abstract
Purpose To enable whole‐heart 3D coronary magnetic resonance angiography (CMRA) with isotropic sub‐millimeter resolution in a clinically feasible scan time by combining respiratory motion correction with highly accelerated variable density sampling in concert with a novel 3D patch‐based undersampled reconstruction (3D‐PROST). Methods An undersampled variable density spiral‐like Cartesian trajectory was combined with 2D image‐based navigators to achieve 100% respiratory efficiency and predictable scan time. 3D‐PROST reconstruction integrates structural information from 3D patch neighborhoods through sparse representation, thereby exploiting the redundancy of the 3D anatomy of the coronary arteries in an efficient low‐rank formulation. The proposed framework was evaluated in a static resolution phantom and in 10 healthy subjects with isotropic resolutions of 1.2 mm3 and 0.9 mm3 and undersampling factors of ×5 and ×9. 3D‐PROST was compared against fully sampled (1.2 mm3 only), conventional parallel imaging, and compressed sensing reconstructions. Results Phantom and in vivo (1.2 mm3) reconstructions were in excellent agreement with the reference fully sampled image. In vivo average acquisition times (min:s) were 7:57 ± 1:18 (×5) and 4:35 ± 0:44 (×9) for 0.9 mm3 resolution. Sub‐millimeter 3D‐PROST resulted in excellent depiction of the left and right coronary arteries including small branch vessels, leading to further improvements in vessel sharpness and visible vessel length in comparison with conventional reconstruction techniques. Image quality rated by 2 experts demonstrated that 3D‐PROST provides good image quality and is robust even at high acceleration factors. Conclusion The proposed approach enables free‐breathing whole‐heart 3D CMRA with isotropic sub‐millimeter resolution in <5 min and achieves improved coronary artery visualization in a short and predictable scan time.
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Affiliation(s)
- Aurélien Bustin
- School of Biomedical Engineering and Imaging Sciences, King's College London, London, United Kingdom
| | - Giulia Ginami
- School of Biomedical Engineering and Imaging Sciences, King's College London, London, United Kingdom
| | - Gastão Cruz
- School of Biomedical Engineering and Imaging Sciences, King's College London, London, United Kingdom
| | - Teresa Correia
- School of Biomedical Engineering and Imaging Sciences, King's College London, London, United Kingdom
| | - Tevfik F Ismail
- School of Biomedical Engineering and Imaging Sciences, King's College London, London, United Kingdom
| | - Imran Rashid
- School of Biomedical Engineering and Imaging Sciences, King's College London, London, United Kingdom
| | - Radhouene Neji
- School of Biomedical Engineering and Imaging Sciences, King's College London, London, United Kingdom.,MR Research Collaborations, Siemens Healthcare Limited, Frimley, United Kingdom
| | - René M Botnar
- School of Biomedical Engineering and Imaging Sciences, King's College London, London, United Kingdom.,Escuela de Ingeniería, Pontificia Universidad Católica de Chile, Santiago, Chile
| | - Claudia Prieto
- School of Biomedical Engineering and Imaging Sciences, King's College London, London, United Kingdom.,Escuela de Ingeniería, Pontificia Universidad Católica de Chile, Santiago, Chile
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