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Lu T, Ma P, Fang H, Chen A, Xu J, Kuang X, Wang M, Su L, Wang S, Zhang Y, Wang J, Yang B, Shi DL, Zhou Y, Gong Q, Liu X, Mao B, Shao M. Prkra dimer senses double-stranded RNAs to dictate global translation efficiency. Mol Cell 2025; 85:2032-2047.e9. [PMID: 40280134 DOI: 10.1016/j.molcel.2025.04.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2024] [Revised: 02/27/2025] [Accepted: 04/02/2025] [Indexed: 04/29/2025]
Abstract
Double-stranded RNAs (dsRNAs), known as conserved pathogen-associated molecular patterns, activate the integrated stress response via interferon-induced protein kinase R (PKR), leading to global translation inhibition. However, the interferon system is inactive in pluripotent cells, leaving the mechanisms of dsRNA sensing and translational control unclear. In this study, we utilized early zebrafish embryos as a model of pluripotent cells and discovered a PKR-independent blockage of translation initiation by dsRNA stimulation. Prkra dimer was identified as the genuine dsRNA sensor. Upon dsRNA binding, the dimerized dsRNA-binding domain 3 of Prkra becomes activated to sequester the eIF2 complexes from the translation machinery, inhibiting global protein synthesis. This distinctive embryonic stress response restricts RNA virus replication in zebrafish embryos, is conserved in mouse embryonic stem cells, and compensates PKR function in differentiated cells. Therefore, the Prkra-mediated dsRNA sensing and translation control may serve as a common strategy for cells to adapt to environmental stresses.
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Affiliation(s)
- Tong Lu
- Shandong Provincial Key Laboratory of Animal Cell and Developmental Biology, School of Life Sciences and Qilu Hospital (Qingdao), Cheeloo College of Medicine, Shandong University, Qingdao 266237, China
| | - Pengcheng Ma
- State Key Laboratory of Genetic Evolution & Animal Models, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650201, China; National Resource Center for Non-Human Primates, and National Research Facility for Phenotypic & Genetic Analysis of Model Animals (Primate Facility), Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan 650107, China
| | - Hailing Fang
- Shandong Provincial Key Laboratory of Animal Cell and Developmental Biology, School of Life Sciences and Qilu Hospital (Qingdao), Cheeloo College of Medicine, Shandong University, Qingdao 266237, China
| | - Aijun Chen
- Shandong Provincial Key Laboratory of Animal Cell and Developmental Biology, School of Life Sciences and Qilu Hospital (Qingdao), Cheeloo College of Medicine, Shandong University, Qingdao 266237, China
| | - Jianlin Xu
- State Key Laboratory of Genetic Evolution & Animal Models, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650201, China
| | - Xi Kuang
- Shandong Provincial Key Laboratory of Animal Cell and Developmental Biology, School of Life Sciences and Qilu Hospital (Qingdao), Cheeloo College of Medicine, Shandong University, Qingdao 266237, China
| | - Mingyu Wang
- State Key Laboratory of Microbial Technology, Institute of Microbial Technology, Qingdao 266237, China
| | - Ling Su
- Shandong Provincial Key Laboratory of Animal Cell and Developmental Biology, School of Life Sciences and Qilu Hospital (Qingdao), Cheeloo College of Medicine, Shandong University, Qingdao 266237, China
| | - Sen Wang
- State Key Laboratory of Microbial Technology, Institute of Microbial Technology, Qingdao 266237, China
| | - Yizhuang Zhang
- Shandong Provincial Key Laboratory of Animal Cell and Developmental Biology, School of Life Sciences and Qilu Hospital (Qingdao), Cheeloo College of Medicine, Shandong University, Qingdao 266237, China
| | - Jiasheng Wang
- Shandong Provincial Key Laboratory of Animal Cell and Developmental Biology, School of Life Sciences and Qilu Hospital (Qingdao), Cheeloo College of Medicine, Shandong University, Qingdao 266237, China
| | - Boya Yang
- Shandong Provincial Key Laboratory of Animal Cell and Developmental Biology, School of Life Sciences and Qilu Hospital (Qingdao), Cheeloo College of Medicine, Shandong University, Qingdao 266237, China
| | - De-Li Shi
- Sorbonne Université, Institut de Biologie Paris-Seine (IBPS), UMR CNRS 8263, INSERM U1345, Development, Adaptation, and Ageing, Paris, France; Fang Zongxi Center, Key Laboratory of Marine Genetics and Breeding, College of Marine Life Sciences, Ocean University of China, Qingdao, China
| | - Yong Zhou
- Yangtze River Fisheries Research Institute, Chinese Academy of Fishery Sciences, Wuhan 430223, China
| | - Qianqian Gong
- Shandong Provincial Key Laboratory of Animal Cell and Developmental Biology, School of Life Sciences and Qilu Hospital (Qingdao), Cheeloo College of Medicine, Shandong University, Qingdao 266237, China
| | - Xiangguo Liu
- Shandong Provincial Key Laboratory of Animal Cell and Developmental Biology, School of Life Sciences and Qilu Hospital (Qingdao), Cheeloo College of Medicine, Shandong University, Qingdao 266237, China; Shandong University, Yuanchen Joint Biomedical Technology Laboratory, Qingdao 266237, China.
| | - Bingyu Mao
- State Key Laboratory of Genetic Evolution & Animal Models, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650201, China; National Resource Center for Non-Human Primates, and National Research Facility for Phenotypic & Genetic Analysis of Model Animals (Primate Facility), Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan 650107, China.
| | - Ming Shao
- Shandong Provincial Key Laboratory of Animal Cell and Developmental Biology, School of Life Sciences and Qilu Hospital (Qingdao), Cheeloo College of Medicine, Shandong University, Qingdao 266237, China; Key Laboratory for Experimental Teratology of the Ministry of Education, Shandong University, Qingdao 266237, China; Shandong University, Yuanchen Joint Biomedical Technology Laboratory, Qingdao 266237, China.
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Aktary Z, Petit V, Berlin I, Raymond J, Berger F, Charoenchon N, Sage E, Bertrand J, Larue L. UVB radiation suppresses Dicer expression through β-catenin. J Cell Sci 2024; 137:jcs261978. [PMID: 39439393 PMCID: PMC11634033 DOI: 10.1242/jcs.261978] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2024] [Accepted: 10/07/2024] [Indexed: 10/25/2024] Open
Abstract
Ultraviolet (UV) rays prompt a natural response in epidermal cells, particularly within melanocytes. The changes in gene expression and related signaling pathways in melanocytes following exposure to UV radiation are still not entirely understood. Our findings reveal that UVB irradiation suppresses the expression of Dicer (also known as Dicer1). This repression is intricately linked to the activation of the phosphoinositide 3-kinase (PI3K), ribosomal S6 kinase (RSK) and Wnt-β-catenin signaling pathways, and is directly associated with transcriptional repression by β-catenin (also known as CTNNB1). Notably, we have identified specific binding sites for the TCF/LEF-β-catenin complex in the Dicer promoter. Collectively, these results emphasize the significance of the UV-induced pathway involving the TCF/LEF-β-catenin complex, which impacts Dicer expression. UV radiation also reduced the levels of specific microRNAs known to be important in the biology of melanocytes. This pathway holds potential importance in governing melanocyte physiology.
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Affiliation(s)
- Zackie Aktary
- Institut Curie, PSL Research University, INSERM U1021, Normal and Pathological Development of Melanocytes, 91405 Orsay, France
- Université Paris-Saclay, Univ Paris-Saclay, CNRS UMR 3347, 91405 Orsay, France
| | - Valérie Petit
- Institut Curie, PSL Research University, INSERM U1021, Normal and Pathological Development of Melanocytes, 91405 Orsay, France
- Université Paris-Saclay, Univ Paris-Saclay, CNRS UMR 3347, 91405 Orsay, France
| | - Irina Berlin
- Institut Curie, PSL Research University, INSERM U1021, Normal and Pathological Development of Melanocytes, 91405 Orsay, France
- Université Paris-Saclay, Univ Paris-Saclay, CNRS UMR 3347, 91405 Orsay, France
| | - Jeremy Raymond
- Ludwig Institute for Cancer Research, Nuffield Department of Medicine, University of Oxford, 0X3 7DQ, Headington, Oxford, UK
| | - Frederique Berger
- Department of Biostatistics, Institut Curie, 92210 Saint-Cloud, France
| | - Nisamanee Charoenchon
- Institut Curie, PSL Research University, INSERM U1021, Normal and Pathological Development of Melanocytes, 91405 Orsay, France
- Université Paris-Saclay, Univ Paris-Saclay, CNRS UMR 3347, 91405 Orsay, France
| | - Evelyne Sage
- Institut Curie, PSL Research University, INSERM U1021, Normal and Pathological Development of Melanocytes, 91405 Orsay, France
- Université Paris-Saclay, Univ Paris-Saclay, CNRS UMR 3347, 91405 Orsay, France
| | - Juliette Bertrand
- Institut Curie, PSL Research University, INSERM U1021, Normal and Pathological Development of Melanocytes, 91405 Orsay, France
- Université Paris-Saclay, Univ Paris-Saclay, CNRS UMR 3347, 91405 Orsay, France
| | - Lionel Larue
- Institut Curie, PSL Research University, INSERM U1021, Normal and Pathological Development of Melanocytes, 91405 Orsay, France
- Université Paris-Saclay, Univ Paris-Saclay, CNRS UMR 3347, 91405 Orsay, France
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Ogino H, Kamei Y, Hayashi T, Sakamoto J, Suzuki M, Igawa T. Invention sharing is the mother of developmental biology. Dev Growth Differ 2021; 63:458. [PMID: 34967943 DOI: 10.1111/dgd.12763] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Hajime Ogino
- Amphibian Research Center, Graduate School of Integrated Sciences for Life, Hiroshima University, Higashi-Hiroshima, Japan
| | - Yasuhiro Kamei
- Spectrography and Bioimaging Facility, NIBB Core Research Facilities, National Institute for Basic Biology, Okazaki, Japan
| | - Toshinori Hayashi
- Amphibian Research Center, Graduate School of Integrated Sciences for Life, Hiroshima University, Higashi-Hiroshima, Japan
| | - Joe Sakamoto
- Spectrography and Bioimaging Facility, NIBB Core Research Facilities, National Institute for Basic Biology, Okazaki, Japan
| | - Makoto Suzuki
- Amphibian Research Center, Graduate School of Integrated Sciences for Life, Hiroshima University, Higashi-Hiroshima, Japan
| | - Takeshi Igawa
- Amphibian Research Center, Graduate School of Integrated Sciences for Life, Hiroshima University, Higashi-Hiroshima, Japan
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