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Li X, Zhao M, Li Y, Zhang A, Liu Y, Li J, Li D, Guo J, Ma L, Mu Q. Enhancing diagnostic accuracy in common human poxvirus infections during mpox outbreak: A dermoscopy review. Skin Res Technol 2023; 29:e13489. [PMID: 37881051 PMCID: PMC10541801 DOI: 10.1111/srt.13489] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2023] [Accepted: 09/23/2023] [Indexed: 10/27/2023]
Abstract
Poxviruses belong to the Poxviridae family, a group of pathogens known for their high infectivity in humans, posing significant health threats. One of the most well-known representatives of poxvirus infections is smallpox, which has been successfully eradicated. However, in recent years, there has been a resurgence in cases of mpox, another member of the Poxviridae family, raising concerns about the potential for a global pandemic or a worldwide health crisis. While the typical clinical presentation of mpox and other poxvirus infections often involves cutaneous lesions, there have been reports of various atypical and non-classic clinical manifestations. Dermoscopy has emerged as a crucial diagnostic tool, aiding dermatologists in clinical practice to make informed decisions. In this summary, we provide an overview of the clinical and dermoscopic features of representative cutaneous lesions associated with human poxvirus infections, including mpox, orf, milker's nodule, and molluscum contagiosum.
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Affiliation(s)
- Xu Li
- Department of DermatologyThe First Hospital of HohhotHohhotChina
- Department of AllergyThe First Hospital of HohhotHohhotChina
| | - Mutong Zhao
- Department of DermatologyBeijing Children's HospitalCapital Medical UniversityNational Center for Children's HealthBeijingChina
| | - Yanfei Li
- Department of DermatologyThe First Hospital of HohhotHohhotChina
- Department of AllergyThe First Hospital of HohhotHohhotChina
| | - Anda Zhang
- Department of DermatologyInternational Mongolian Hospital of Inner MongoliaHohhotChina
| | - Ying Liu
- Department of DermatologyBeijing Children's HospitalCapital Medical UniversityNational Center for Children's HealthBeijingChina
| | - Jiaojiao Li
- Department of DermatologyThe First Hospital of HohhotHohhotChina
| | - Dan Li
- Department of DermatologyThe First Hospital of HohhotHohhotChina
| | - Jingxue Guo
- Department of DermatologyThe First Hospital of HohhotHohhotChina
| | - Lin Ma
- Department of DermatologyBeijing Children's HospitalCapital Medical UniversityNational Center for Children's HealthBeijingChina
| | - Qiri Mu
- Department of DermatologyInternational Mongolian Hospital of Inner MongoliaHohhotChina
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Ivanisenko TV, Demenkov PS, Kolchanov NA, Ivanisenko VA. The New Version of the ANDDigest Tool with Improved AI-Based Short Names Recognition. Int J Mol Sci 2022; 23:ijms232314934. [PMID: 36499269 PMCID: PMC9738852 DOI: 10.3390/ijms232314934] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2022] [Revised: 11/19/2022] [Accepted: 11/22/2022] [Indexed: 12/05/2022] Open
Abstract
The body of scientific literature continues to grow annually. Over 1.5 million abstracts of biomedical publications were added to the PubMed database in 2021. Therefore, developing cognitive systems that provide a specialized search for information in scientific publications based on subject area ontology and modern artificial intelligence methods is urgently needed. We previously developed a web-based information retrieval system, ANDDigest, designed to search and analyze information in the PubMed database using a customized domain ontology. This paper presents an improved ANDDigest version that uses fine-tuned PubMedBERT classifiers to enhance the quality of short name recognition for molecular-genetics entities in PubMed abstracts on eight biological object types: cell components, diseases, side effects, genes, proteins, pathways, drugs, and metabolites. This approach increased average short name recognition accuracy by 13%.
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Affiliation(s)
- Timofey V. Ivanisenko
- Kurchatov Genomics Center, Institute of Cytology & Genetics, Siberian Branch, Russian Academy of Sciences, Prospekt Lavrentyeva 10, Novosibirsk 630090, Russia
- Institute of Cytology & Genetics, Siberian Branch, Russian Academy of Sciences, Prospekt Lavrentyeva 10, Novosibirsk 630090, Russia
- Correspondence:
| | - Pavel S. Demenkov
- Kurchatov Genomics Center, Institute of Cytology & Genetics, Siberian Branch, Russian Academy of Sciences, Prospekt Lavrentyeva 10, Novosibirsk 630090, Russia
- Institute of Cytology & Genetics, Siberian Branch, Russian Academy of Sciences, Prospekt Lavrentyeva 10, Novosibirsk 630090, Russia
| | - Nikolay A. Kolchanov
- Kurchatov Genomics Center, Institute of Cytology & Genetics, Siberian Branch, Russian Academy of Sciences, Prospekt Lavrentyeva 10, Novosibirsk 630090, Russia
- Institute of Cytology & Genetics, Siberian Branch, Russian Academy of Sciences, Prospekt Lavrentyeva 10, Novosibirsk 630090, Russia
- Faculty of Natural Sciences, Novosibirsk State University, St. Pirogova 1, Novosibirsk 630090, Russia
| | - Vladimir A. Ivanisenko
- Kurchatov Genomics Center, Institute of Cytology & Genetics, Siberian Branch, Russian Academy of Sciences, Prospekt Lavrentyeva 10, Novosibirsk 630090, Russia
- Institute of Cytology & Genetics, Siberian Branch, Russian Academy of Sciences, Prospekt Lavrentyeva 10, Novosibirsk 630090, Russia
- Faculty of Natural Sciences, Novosibirsk State University, St. Pirogova 1, Novosibirsk 630090, Russia
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Dermoscopy of Bacterial, Viral, and Fungal Skin Infections: A Systematic Review of the Literature. Dermatol Ther (Heidelb) 2022; 13:51-76. [PMID: 36417086 PMCID: PMC9823193 DOI: 10.1007/s13555-022-00855-2] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2022] [Accepted: 11/04/2022] [Indexed: 11/24/2022] Open
Abstract
Over the last three decades, the use of dermoscopy has been extended to inflammatory and infectious dermatoses. Regarding the latter, while the first applications concerned skin parasitoses, there has been a significant increase in the publication trend regarding nonparasitic dermatoses over recent years, yet data on this topic are sparse and often lack a standardized analytical approach. This systematic literature review summarizes published data on dermoscopy of bacterial, viral, and fungal dermatoses (dermoscopic findings, used setting, pathological correlation, and level of evidence of studies) and provides a homogeneous terminology of reported dermoscopic features according to a standardized methodology. A total of 152 papers addressing 43 different dermatoses and describing 184 different dermoscopic findings were included in the analysis. The majority of them displayed a level of evidence of V (107 single case reports and 40 case series), with only 5 studies showing a level of evidence of IV (case-control studies). Moreover, our analysis also underlined a high variability in the terminology used in published articles (even for the same dermatosis). Therefore, despite significant potential, future studies designed according to a systematic and standardized approach are required for a better characterization of dermoscopy of nonparasitic skin infections.
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Alnami A, Shokor N, Alajlan A, AlJasser MI. Clinical and dermoscopic features of orf transmitted from camels. Int J Dermatol 2021; 60:e276-e277. [PMID: 33650181 DOI: 10.1111/ijd.15479] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/14/2020] [Revised: 01/18/2021] [Accepted: 02/03/2021] [Indexed: 12/01/2022]
Affiliation(s)
- Abdulaziz Alnami
- Division of Dermatology, King Saud bin Abdulaziz University for Health Sciences, Riyadh, Saudi Arabia.,Division of Dermatology, King Fahad Medical City, Riyadh, Saudi Arabia
| | - Nada Shokor
- Department of Pathology, King Saud bin Abdulaziz University for Health Sciences, Riyadh, Saudi Arabia
| | - Abdulaziz Alajlan
- Department of Pathology, King Saud bin Abdulaziz University for Health Sciences, Riyadh, Saudi Arabia
| | - Mohammed I AlJasser
- Division of Dermatology, King Saud bin Abdulaziz University for Health Sciences, Riyadh, Saudi Arabia
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