Linkage studies between the halothane (Hal), phosphohexose isomerase (Phi) and the S(A-O) and H red blood cell loci of Pietrain/Hampshire and Landrace pigs

Performance of British Landrace pigs selected for high and low incidence of halothane sensitivity 2. Growth and carcass traits

The effects of halothane phenotype on growth were estimated from generations 1 to 3 of British Landrace positive and negative selection lines. A total of 241 full-sib pairs (castrated male and gilt) from 133 second litters were performance tested from 25 to 85 kg live weight on either ad libitum or scale (0·69 g/g ad libitum daily food intake) feeding.

Compared with negative reactors over feeding regimes, positive pigs showed significant advantages in food conversion ratio (−0·07, s.e. 0·02), eye-muscle area (0·8, s.e. 0·3 cm2), proportion of lean in sample joints (16, s.e. 7 g/kg), and visual conformation scores, accompanied by disadvantages in meat colour (5·9, s.e. 2·1 EEL units), incidence of pale, soft, exudative (PSE) meat (0·36 v. 0·05, P < 0·001), post-weaning mortality (0·09 v. 0·01, P < 0·001) and ad libitum daily food consumption (−0·08, s.e. 0·02 kg). In addition, there were non-significant indications of an advantage in carcass lean proportion (11, s.e. 10 g/kg), with disadvantages in carcass length (−14, s.e. 7 mm) and proportion of lean in high-priced cuts (−6, s.e. 2 g/kg). Only daily food consumption showed significant selection line × feeding level interaction.

Averaged over feeding regimes, an estimated extra return of £1·70 (s.e. 0·50) from lean growth would be offset by increased PSE and mortality to give a net loss of roughly £3·90 (s.e. 1·00) per positive reactor. Taking these results as the minimum difference between homozygotes, and if the gene is additive for lean proportion but recessive for stress susceptibility, the heterozygote would have an advantage of £0·90 over the normal homozygote. The effects of the gene on growth and carcass traits in British Landrace appear similar to those reported in other breeds, although the advantage of positive reactors in lean proportion may be slightly smaller.

Performance of British Landrace pigs selected for high and low incidence of halothane sensitivity

Halothane positive and negative selection lines were established to estimate the effects of the halothane gene on performance in British Landrace pigs. Incidences of positive reaction diverged from 0·12 in the foundation generation to 0·93 in the positive and to 0·02 in the negative line in generation 4. Differences in litter productivity as a trait of the dam were estimated from a total of 399 positive × positive and negative × negative parity 1 and 2 matings in generations 1 to 4.

Compared with negative contemporaries, positive females showed non-significant reductions in litter size at birth (−0·10, s.e. 0·26) and at 42 days (−0·28, s.e. 0·26), accompanied by significant reductions in average piglet weights at birth (−0·11, s.e. 0·02 kg) and 42 days (−0·4, s.e. 0·2 kg). There were no differences in conception rate or adult live weights. A subsample of 69 parity 2 and 3 sows slaughtered 30 days after mating showed no significant difference in ovulation rate or embryo survival, but for positive dams the length of embryos was significantly reduced (−3·1, s.e. 1·1 mm).

The study suggests that the principal effect of the halothane gene was in reducing foetal growth rather than litter size. However, the phenotypic difference is expected to under-estimate the genetic difference between homozygotes, and it was not possible to distinguish the effects of dam and offspring genotypes. The present economic loss of roughly £4·70 per positive litter would be unlikely to justify elimination of the gene from a purebred maternal Landrace herd.

Succinylcholine and halothane as a field test for the heterozygote at the halothane locus in pigs

Reaction to the muscle relaxant succinylcholine was investigated as a possible method of distinguishing the heterozygote from the normal homozygote at the halothane locus. Totals of 54 assumed heterozygotes and 67 assumed homozygotes received intravenous succinylcholine during halothane anaesthesia at 6 to 10 weeks of age. Three separate measures of the duration and severity of the muscular reaction to succinylcholine were all significantly increased in heterozygotes compared with homozygotes. The genotypic difference for one of the three reaction traits was significantly influenced by the day of testing. Due to overlapping distributions for the two genotypes, succinylcholine reactions did not offer a precise method of identifying individual heterozygotes. Although test mating to recessive homozygotes would still be required to be certain of eliminating the halothane gene, the gene frequency among prosepective parents for test mating could be substantially reduced by succinylcholine screening. Due to the expertise and time required, succinylcholine testing would probably only be worthwhile for the production of specialized homozygous lines at nucleus level.

Associations between marker genotypes, halothane reaction, creatine kinase activity and meat quality characters in a sample of German Landrace pigs

Routine blood typing of German Landrace pedigree populations and an earlier study revealed very low frequencies of the favourable alleles at the marker loci Phi, Pgd and H. The hypothesis was that in this population the whole linkage group of favourable alleles at the halothane and neighbouring marker loci may have been lost as a consequence of intense selection for leanness and type. The present study of 1050 German Landrace pigs at the Relliehausen experimental station, where some effort has been made to maintain a higher frequency of the favourable alleles PhiA (0.48), H- (0.43) and PgdA (0.70) gave quite different results. The frequency of halothane-positive pigs found by using a severe test was only 30%. Only 5.4%, 8.8%, 13.4% and 13.9% of animals with PhiA/A, H-/-, PgdA/A and PhiA/B genotypes respecitively were halothane-positive. Forty to sixty per cent of pigs with these marker genotypes could therefore be expected to be homozygous halothane-negative (N/N) animals. Creatine kinase activity and three selected meat quality characters showed highly significant differences between the A/A and the B/B genotypes for the marker loci Phi and Pgd, with the heterozygotes being intermediate. These differences are greater than those observed between halothane-negative and halothane-positive phenotypes. The only other consistently superior marker genotype in this population was the H blood group genotype H-/-. In contrast to findings from Sweden and Switzerland, the postalbumin locus Po2 and the suppressor locus S for the A-O blood groups did not exhibit useful marker qualities.(ABSTRACT TRUNCATED AT 250 WORDS)

Recombination between the S and the H blood group loci in pigs

The investigation of A-O blood group phenotypes in selected pig families confirms the existence of an S locus which specifically controls the expression of A and O alloantigens. Forty-five informative litters were scored for linkage between the S gene and the H blood group locus. The recombination frequency in 345 offspring was estimated to be 9.56% (33 cross-overs). Specific difficulties involved in the determination of A-O and H phenotypes and the importance of S and H polymorphisms for the determination of Hal genotypes are discussed.

Relationships between blood groups, isozymes and halothane reaction in pigs from a selection experiment

German Landrace pigs (n = 1500) were halothane-tested and blood samples were taken for the determination of A-O and H blood types as well as for the determination of PHI and 6-PGD isozymes. The pigs originated from two generations (7th and 8th) of a selection experiment 'selection for activity of NADPH-generating enzymes in backfat of pigs'. The selection lines are E-, E+ (selection for low and high enzyme activity), U- (selection for low ultrasonic backfat thickness) and K (control). Preliminary results show an average proportion of halothane-susceptible animals of 49%. The frequencies of halothane-positive pigs amount to 60%, 46%, 70% and 30% in lines E-, E+, U- and K, respectively. The investigation shows a non-random combination of the marker genes caused by linkage disequilibrium, especially in line E-. Recombination frequencies between the loci vary from 0% to 18%.

Blood group association with severity and speed of the halothane reaction

The second generation (n = 227) of British Landrace pigs from selected halothane-positive parents (36 litters) were blood-typed for the S(A-O), H and Phi loci and subjected to four 5-minute halothane tests at 21, 35, 49 and 63 days of age. Cumulative scores based on severity and speed of reaction were analysed in relation to single-locus blood group genotypes and linkage group sequences at two and three loci. A highly significant negative correlation (r = -0.79) was found between severity and speed of reaction. Significant differences occurred between blood group genotypes and linkage groups in both severity and speed of reaction. Genotypes S s/s, H a/a or H a/- and Phi B/B and linkage groups involving these three types had the highest cumulative reaction score and the fastest reaction time, whereas genotypes Phi A/B, S S/S or S S/s and H a/cd and linkage groups with these types had the lowest and slowest reaction scores. Some differences between genotypes and linkage groups were attributed to phenotypically halothane-positive parents and offspring being genotypically Hal N/n. These effects could result from linkage with heterozygous types such as H a/cd and S S/s. The possible role of the H cd allele acting as a genetic marker for a suppressor gene to the halothane reaction is discussed.

Gene order and recombination rates in the linkage group S-Phi-Hal-H-(Po2)-Pgd in pigs

Families of Czech Landrace (94 litters and 636 offspring) were tested for halothane sensitivity, A-O (S), H, PHI and PGD phenotypes. Informative matings for the estimation of recombination rates between marker loci were selected. The following recombination frequencies were established: S - Phi = 4.8% (2.5%-10.7%); S - H = 6.8% (4.3%-11.7%); Phi - H = 2.6% (0.9%-5.3%); H - Pgd = 4.4% (1.6%-8.0%). Cross-overs were observed also between S - Hal, Hal - H and Hal - Pgd, but were not found between Phi - Hal. On the basis of these results it has been possible to revise the position of the S locus in this linkage group. The most probable gene order would be: S - Phi - Hal (or Hal - Phi) - H - (Po2) - Pgd. A striking difference was found between the number of halothane-sensitive pigs (87) and HalnHaln genotypes determined by haplotyping (123). Segregation rates in 19 backcross matings and experimental matings of the animals proved that this difference is mostly due to incomplete penetrance or low expression of halothane sensitivity.

Prediction of the halothane (Hal) genotypes of pigs by deducing Hal, Phi, Po2, Pgd haplotypes of parents and offspring: results from a large-scale practice in Swedish breeds

Results from a large-scale study, comprising 75 different breeding herds, are reported on predicting the halothane (Hal) genotypes of individual pigs by making use of the known close linkage between Hal and three electrophoretic blood marker loci (Phi, Po2, Pgd). The parents haplotypes (involving Hal and marker loci) were determined from the HAL phenotypes (halothane test results) and marker loci phenotypes of their offspring in the first one or two litters studied. In subsequent litters of the Hal-marker loci haplotyped parents, the offspring's expected Hal genotypes could be predicted on the basis of the marker loci haplotypes inherited by them. By comparing the expected and observed HAL phenotypes of offspring in subsequent litters, the predicted Hal genotype was found to be correct in 90-95% of the 4000 offspring (from Nn X Nn and Nn X nn matings) of Swedish Landrace and Yorkshire breeds studied. The order of the three marker loci was confirmed as Phi-Po2-Pgd but the position of Hal with regards to Phi could not be resolved. The recombination frequencies between the most distant loci in this region, viz. Hal-Pgd and Phi-Pgd, were estimated to be 3-4.5% and 4-6%, respectively. The easy and rapid electrophoretic techniques described in the study to phenotype PHI, PO2, PGD, also allowed phenotyping of six other polymorphic protein systems on the same gels. Thus Hal genotyping and effective parentage control can be conducted simultaneously.

Isolation, characterization and chromosomal assignment of a partial cDNA for porcine 6-phosphogluconate dehydrogenase

A partial cDNA for 6-phosphogluconate dehydrogenase (PGD, EC 1.1.1.44) was isolated from a porcine liver cDNA library using a rat PGD cDNA. The identity of the PGD cDNA was confirmed by DNA sequencing and comparison of the amino acid sequence with the corresponding ovine sequence. The PGD cDNA was assigned to 6q2.5-2.7 by in situ hybridization.

First international workshop on porcine chromosome 6. Report and abstracts

Recent advances in the use of microsatellite markers and the development of comparative gene mapping techniques have made the construction of high resolution genetic maps of livestock species possible. Framework and comprehensive genetic linkage maps of porcine chromosome 6 have resulted from the first international effort to integrate genetic maps from multiple laboratories. Eleven highly polymorphic genetic markers were exchanged and mapped by four independent laboratories on a total of 583 animals derived from four reference populations. The chromosome 6 framework map consists of 10 markers ordered with high local support. The average marker interval of the framework map is 15.1 cM (sex averaged). The framework map is 135, 175 and 109 cM in length (for sex averaged, female and male maps, respectively). The comprehensive map includes a total of 48 type I and type II markers with a sex averaged interval of 3.5 cM and is 166, 196 and 126 cM (for sex averaged, female and male maps, respectively). Additional markers within framework map marker intervals can thus be selected from the comprehensive map for further analysis of quantitive trait loci (QTL) located on chromosome 6. The resulting maps of swine chromosome 6 provide a valuable tool for analysing and locating QTL.