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Chen S, Chen K, Xu J, Li F, Ding J, Ma Z, Li G, Li H. Insights Into mRNA and Long Non-coding RNA Profiling RNA Sequencing in Uterus of Chickens With Pink and Blue Eggshell Colors. Front Vet Sci 2021; 8:736387. [PMID: 34692811 PMCID: PMC8529033 DOI: 10.3389/fvets.2021.736387] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2021] [Accepted: 08/30/2021] [Indexed: 11/17/2022] Open
Abstract
The blue egg is both of biological interest and economic importance for consumers, egg retailers, and scientists. To date, the genetic mechanisms underlying pigment have mainly focused on protein-coding genes. However, the underpinning mechanism of non-coding RNAs on the pigment deposition among different eggshell colors remains unknown. In this study, RNA sequencing was employed to profile the uterine gland transcriptome (lncRNA and mRNA) of 15 Changshun blue eggshell layers, to better understand the genetic mechanisms of deposition of blue eggshell color. Results showed that differentially expressed mRNAs, GO terms, and KEGG pathways among pink-eggshell and blue-eggshell chickens were mainly targeting immune- and transporter-related terms with the SLC family, IgJ, CD family, and MTMR genes. Furthermore, the progesterone-mediated oocyte maturation and cortisol synthesis and secretion pathway with targeted gene PGR and Pbx1 were significantly enriched between blue- and pink-eggshell chickens. Integrating analysis of lncRNA and mRNA profiles predicted 4 and 25 lncRNA–gene pairs by antisense and cis analysis. They were relative to immune, nerve, and lipids and amino acid metabolisms, porphyrin, and chlorophyll metabolism with targeted gene FECH and oxidative phosphorylation and cardiac muscle contraction pathways with targeted gene COX6A1. Within blue-eggshell chickens, the GO terms hindbrain tangential cell migration and phosphatidylinositol monophosphate phosphatase activity with targeted gene Plxna2 and MTRM1 were identified. Integrating analysis of lncRNA and mRNA profiles predicted 8 and 22 lncRNA–gene pairs. Most pathways were mainly enriched on lipid-related metabolisms as found in mRNA sequencing. The lncRNAs did exert similar functions in color formation by modulating pigment disposition and immune- and lipid-related metabolisms. Our results provide a catalog of chicken uterine lncRNAs and genes worthy of further studies to understand their roles in the selection for blue eggshell color layers.
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Affiliation(s)
- Siyu Chen
- Guangdong Provincial Key Laboratory of Animal Molecular Design and Precise Breeding, Key Laboratory of Animal Molecular Design and Precise Breeding of Guangdong Higher Education Institutes, School of Life Science and Engineering, Foshan University, Foshan, China
| | - Kecheng Chen
- Guangdong Provincial Key Laboratory of Animal Molecular Design and Precise Breeding, Key Laboratory of Animal Molecular Design and Precise Breeding of Guangdong Higher Education Institutes, School of Life Science and Engineering, Foshan University, Foshan, China
| | - Jiaming Xu
- Guangdong Provincial Key Laboratory of Animal Molecular Design and Precise Breeding, Key Laboratory of Animal Molecular Design and Precise Breeding of Guangdong Higher Education Institutes, School of Life Science and Engineering, Foshan University, Foshan, China
| | - Fangwei Li
- Guizhou Changshun Tiannong Green Shell Laying Hen Industrial Co. Ltd, Chang Shun City, China
| | - Jinlong Ding
- Guizhou Changshun Tiannong Green Shell Laying Hen Industrial Co. Ltd, Chang Shun City, China
| | - Zheng Ma
- Guangdong Provincial Key Laboratory of Animal Molecular Design and Precise Breeding, Key Laboratory of Animal Molecular Design and Precise Breeding of Guangdong Higher Education Institutes, School of Life Science and Engineering, Foshan University, Foshan, China
| | - Gen Li
- Guangdong Provincial Key Laboratory of Animal Molecular Design and Precise Breeding, Key Laboratory of Animal Molecular Design and Precise Breeding of Guangdong Higher Education Institutes, School of Life Science and Engineering, Foshan University, Foshan, China
| | - Hua Li
- Guangdong Provincial Key Laboratory of Animal Molecular Design and Precise Breeding, Key Laboratory of Animal Molecular Design and Precise Breeding of Guangdong Higher Education Institutes, School of Life Science and Engineering, Foshan University, Foshan, China
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Orłowski G, Niedzielski P, Merta D, Pokorny P, Proch J. Quantifying the functional disparity in pigment spot-background egg colour ICP-OES-based eggshell ionome at two extremes of avian embryonic development. Sci Rep 2020; 10:22107. [PMID: 33335140 PMCID: PMC7747640 DOI: 10.1038/s41598-020-79040-4] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2020] [Accepted: 12/01/2020] [Indexed: 11/21/2022] Open
Abstract
It is known that a developing avian embryo resorbs micronutrients (calcium and other chemical elements) from the inner layer of the eggshell, inducing thinning and overall changes in the shell’s chemical composition. However, an aspect yet to be explored relates to the local changes in the multi-elemental composition (ionome) of the pigment spot and adjacent background colour regions of eggshells resulting from avian embryogenesis (with respect to two extremes of embryonic growth: the maternal level at the moment of egg laying, and after the completion of embryonic growth). To address this problem, we used inductively-coupled plasma optical emission spectrometry (ICP-OES) to establish the elemental profiles of microsamples from the cryptic eggs of Capercaillie Tetrao urogallus and Black Grouse Tetrao tetrix, representing the background colour and pigment spot regions of the shell. We then related these to the developmental stage of the eggs (non-embryonated eggs vs. post-hatched eggshells) and their origin (wild vs. captive hens). Our results show an apparent local disparity between the pigment spot and background colour regions in the distribution of chemical elements: most elements tended to be at higher levels in the speckled regions of the shell, these differences becoming less pronounced in post-hatched eggshells. The trends of changes following embryonic eggshell etching between the pigment spot and background colour shell regions were conflicting and varied between the two species. We hypothesized that one potential working explanation for these interspecific differences could be based on the variable composition of elements (mostly of Ca and Mg), which are the result of the varying thickness of the individual shell layers, especially as the relative difference in shell thickness in the pigment spots and background colour regions was less in Black Grouse eggs. Overall, this investigation strongly suggests that egg maculation plays a functional role in the physiological deactivation of trace elements by incorporating them into the less calcified external shell layer but without participating in micronutrient resorption. Our major critical conclusion is that all research involving the chemical analysis of eggshells requires standardized eggshell sampling procedures in order to unify their colouration and embryonic status.
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Affiliation(s)
- Grzegorz Orłowski
- Institute for Agricultural and Forest Environment, Polish Academy of Sciences, Bukowska 19, 60-809, Poznań, Poland.
| | - Przemysław Niedzielski
- Department of Analytical Chemistry, Adam Mickiewicz University, Uniwersytetu Poznańskiego 8, 61-614, Poznań, Poland
| | - Dorota Merta
- Department of Ecology and Environmental Protection, Pedagogical University of Kraków, Podchorążych 2, 30-084, Kraków, Poland
| | - Przemysław Pokorny
- Department of Limnology and Fishery, Institute of Animal Breeding, Wrocław University of Environmental and Life Sciences, Chełmońskiego 38C, 51-630, Wrocław, Poland
| | - Jędrzej Proch
- Department of Analytical Chemistry, Adam Mickiewicz University, Uniwersytetu Poznańskiego 8, 61-614, Poznań, Poland
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Buck A, Carrillo-Hidalgo J, Camarero PR, Mateo R. Organochlorine pesticides and polychlorinated biphenyls in common kestrel eggs from the Canary Islands: Spatiotemporal variations and effects on eggshell and reproduction. CHEMOSPHERE 2020; 261:127722. [PMID: 32717515 DOI: 10.1016/j.chemosphere.2020.127722] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2020] [Revised: 07/10/2020] [Accepted: 07/13/2020] [Indexed: 06/11/2023]
Abstract
Organochlorine (OC) pesticides were widely used on the Canary Islands (Spain) for intensive crop production and against plagues of African locust. A previous study performed in 1988-1994 showed a high concentration of p,p'-DDE in the eggs of common kestrels (Falco tinnunculus) from the island of Tenerife. The present study shows OC pesticide and polychlorinated biphenyl (PCBs) levels in 40 unhatched common kestrel eggs collected from southern Tenerife between 2009 and 2016. The protoporphyrin IX in eggshells has also been analysed in order to explore the use of this pigment as a biomarker. Egg biometry, status of embryo development, eggshell thickness and mass of extractable lipids of each egg were recorded. Surrounding land use and reproductive parameters (hatching and fledging rates) were obtained for each nest. The most abundant compound was p,p'-DDE (15.0 μg/g d.w), followed by PCBs (0.46 μg/g d.w.). The decline in p,p'-DDE levels in southern Tenerife (with 23.6 μg/g d.w. in 1988-1994) was 36.4%. p,p'-DDE levels were positively associated with the surface of active and abandoned cropland in a 200 m-radius around the nest and with proximity to urban areas. PCB levels were associated with proximity to roads. Shell thickness was negatively affected by the p,p'-DDE concentration. The concentration of protoporphyrin IX in the eggshell was negatively associated with the concentration of hexachlorobenzene in the egg content. Despite the total ban on the use of p,p'-DDT in Spain since 1986, p,p'-DDE levels remain elevated in those areas in which that use was formerly intensive.
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Affiliation(s)
- Annika Buck
- Instituto de Investigación en Recursos Cinegéticos (IREC), CSIC-UCLM-JCCM, 13005, Ciudad Real, Spain; Institute of Environmental Sciences, University of Koblenz-Landau, Fortstrasse 7, 76829, Landau, Germany
| | - José Carrillo-Hidalgo
- Island Ecology and Biogeography Research Group, University Institute of Tropical Diseases and Public Health of the Canary Islands (IUETSPC), University of La Laguna, 38206, San Cristóbal de La Laguna, Tenerife, Canary Islands, Spain
| | - Pablo R Camarero
- Instituto de Investigación en Recursos Cinegéticos (IREC), CSIC-UCLM-JCCM, 13005, Ciudad Real, Spain
| | - Rafael Mateo
- Instituto de Investigación en Recursos Cinegéticos (IREC), CSIC-UCLM-JCCM, 13005, Ciudad Real, Spain.
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Pérez de Vargas A, Cuadrado M, Camarero PR, Mateo R. An assessment of eggshell pigments as non-invasive biomarkers of organochlorine pollutants in gull-billed tern. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 732:139210. [PMID: 32438180 DOI: 10.1016/j.scitotenv.2020.139210] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2020] [Revised: 05/01/2020] [Accepted: 05/02/2020] [Indexed: 06/11/2023]
Abstract
Eggshell pigmentation has been assessed as an indicator of exposure to environmental pollutants in birds, but these studies have only used reflectance spectrophotometry to measure such pigmentation. The present study is the first one that measures eggshell pigments and pollutants in the same eggs to explore their use as biomarkers in birds. We have studied the concentration of organochlorine pesticides and polychlorinated biphenyls (PCBs) in the content of 97 deserted eggs of gull-billed terns (Gelochelidon nilotica) after the abandonment of the colony in Mesas de Asta (Cádiz, S Spain) in 2012. Eggshell thickness and stage of embryo development were studied together along with the concentrations of protoporphyrin IX and biliverdin in eggshells. p,p'-DDE concentrations were high when compared with other studies done with terns in the Mediterranean basin in the past. p,p'-DDE and PCB levels associated with reduced reproductive success were found in 5.1% and 2.1% of the eggs respectively. Eggshell index was largely affected by the embryo development stage, which highlights the need of knowing this information to avoid potential biases in the interpretation of results. The concentrations of protoporphyrin IX and biliverdin in the eggs of gull-billed terns were negatively associated with DDTs levels, which seems to confirm previous observations with phylogenetically related species.
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Affiliation(s)
- Ana Pérez de Vargas
- Instituto de Investigación en Recursos Cinegéticos (IREC), CSIC-UCLM-JCCM, Ronda de Toledo 12, 13005 Ciudad Real, Spain; Veterinary Diagnostic and Research Unit, Veterinary Section, Al Ain Zoo, PO Box 1204, United Arab Emirates
| | - Mariano Cuadrado
- ZooBotánico Jerez - Ayuntamiento de Jerez, Madreselva s/n, 11408 Jerez de la Frontera, Cádiz, Spain
| | - Pablo R Camarero
- Instituto de Investigación en Recursos Cinegéticos (IREC), CSIC-UCLM-JCCM, Ronda de Toledo 12, 13005 Ciudad Real, Spain
| | - Rafael Mateo
- Instituto de Investigación en Recursos Cinegéticos (IREC), CSIC-UCLM-JCCM, Ronda de Toledo 12, 13005 Ciudad Real, Spain.
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Morales J. Eggshell Biliverdin as an Antioxidant Maternal Effect. Bioessays 2020; 42:e2000010. [DOI: 10.1002/bies.202000010] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2020] [Revised: 03/25/2020] [Indexed: 02/05/2023]
Affiliation(s)
- Judith Morales
- National Museum of Natural SciencesSpanish National Research Council (CSIC) c/ José Gutiérrez Abascal 2 Madrid 28006 Spain
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Ding J, Yang W, Yang Y, Ai S, Bai X, Zhang Y. Variations in tree sparrow (Passer montanus) egg characteristics under environmental metal pollution. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019; 687:946-955. [PMID: 31412498 DOI: 10.1016/j.scitotenv.2019.06.140] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/09/2019] [Revised: 06/08/2019] [Accepted: 06/08/2019] [Indexed: 06/10/2023]
Abstract
Environmental metal pollution is known to adversely affect bird reproduction, for which the variations of egg characteristics are considered very important. Our study explored whether variations in egg characteristics, such as egg volume, eggshell spotting pattern, eggshell coloration, and eggshell thickness, were correlated with heavy metal levels (Cu, Zn, Pb, and Cd) and Ca levels in the eggshells of tree sparrows (Passer montanus), a widespread passerine species. Eggs were collected from a long-term heavy metal polluted area (Baiyin, BY, northwest China) and a relatively unpolluted area (Liujiaxia, LJX, northwest China). Our results showed that the embryonated (eggshell: Cu: p = 0.003, Pb: p = 0.002) and non-embryonated (egg contents: Pb: p = 0.044, Ca: p = 0.045) eggs collected from BY contained relatively higher metal concentrations than those from LJX. Eggs from BY were smaller in volume (p < 0.01) and thinner in eggshell thickness (p < 0.01) than those from LJX. Mean egg volume increased with clutch size in BY (p = 0.017), which was also accompanied by an increase in the within-clutch coefficient of variation (CV) for egg volume (p = 0.045). Clutches with a higher CV for egg volume tended to contain higher concentrations of Zn and Pb (Zn: p = 0.084; Pb: p = 0.081) in the eggshells from BY. No differences were found in the eggshell spotting coverage ratio of eggs; however, eggshells were much darker in BY than in LJX. A more aggregated eggshell spotting distribution indicated higher eggshell Zn and Pb levels (BY: Zn: p = 0.040, Pb: p = 0.076; LJX: Pb: p = 0.066). The results demonstrate that the egg characteristics of tree sparrows can be used as indicators of metal pollution, especially for the within-clutch CV for egg volume, eggshell spotting pattern and eggshell coloration.
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Affiliation(s)
- Jian Ding
- Gansu Key Laboratory of Biomonitoring and Bioremediation for Environmental Pollution, School of Life Sciences, Lanzhou University, Lanzhou 730000, China
| | - Wenzhi Yang
- Gansu Key Laboratory of Biomonitoring and Bioremediation for Environmental Pollution, School of Life Sciences, Lanzhou University, Lanzhou 730000, China
| | - Ying Yang
- Gansu Key Laboratory of Biomonitoring and Bioremediation for Environmental Pollution, School of Life Sciences, Lanzhou University, Lanzhou 730000, China
| | - Shiwei Ai
- School of Public Health, Lanzhou University, Lanzhou 730000, China
| | - Xiaojuan Bai
- Gansu Key Laboratory of Biomonitoring and Bioremediation for Environmental Pollution, School of Life Sciences, Lanzhou University, Lanzhou 730000, China
| | - Yingmei Zhang
- Gansu Key Laboratory of Biomonitoring and Bioremediation for Environmental Pollution, School of Life Sciences, Lanzhou University, Lanzhou 730000, China.
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Hammer S, Nager RG, Alonso S, McGill RAR, Furness RW, Dam M. Legacy Pollutants are Declining in Great Skuas (Stercorarius skua) but Remain Higher in Faroe Islands than in Scotland. BULLETIN OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY 2016; 97:184-90. [PMID: 27329112 PMCID: PMC4942484 DOI: 10.1007/s00128-016-1856-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2016] [Accepted: 06/14/2016] [Indexed: 05/16/2023]
Abstract
To monitor environmental pollutants in Faroese biota, samples from a top predator were analysed and put into a spatial and temporal context. Analysis of 20 Great Skua eggs sampled in 2012 from the Faroe Islands showed >70 % lower concentrations of legacy persistent organic pollutants (POPs) than in samples analysed in 1977. The 2012 Faroese eggs showed higher concentrations than for eggs in Shetland from about the same period (2008). Eggshells were analysed for sub-lethal effects but there were no detectable effects of legacy POP levels on eggshell colour or thickness. A temporal decline in legacy POPs would indicate a reduction in the general pollutant levels present in the environment as has been shown in other areas of the North Atlantic, but there are significant geographic differences in POPs levels likely due to differences in diet resulting in significantly different exposures on a relatively limited spatial scale.
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Affiliation(s)
- Sjurdur Hammer
- Institute of Biodiversity, Animal Health & Comparative Medicine, University of Glasgow, Glasgow, UK.
| | - Ruedi G Nager
- Institute of Biodiversity, Animal Health & Comparative Medicine, University of Glasgow, Glasgow, UK
| | - Sarah Alonso
- Institute of Biodiversity, Animal Health & Comparative Medicine, University of Glasgow, Glasgow, UK
| | - Rona A R McGill
- NERC Life Sciences Mass Spectrometry Facility, Scottish Universities Environmental Research Centre, Rankine Avenue, East Kilbride, G75 0QF, Scotland, UK
| | | | - Maria Dam
- Environment Agency, Traðagøta 38, Argir, FO-165, Faroe Islands
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Abstract
Although egg color is generally consistent within individual birds and robust to environmental variation, recent evidence suggests a degree of susceptibility to environmental perturbation or modulation of egg color. Most of this variation manifests via the physiology of the laying female, but some direct impacts of the environment on laid eggs have also been discovered. Here we test whether light changes bird egg color and we quantify its effect, by subjecting variable blue-green eggs of Rüppell's weaver (Ploceus galbula) to a broad-spectrum light source under laboratory conditions, and measuring egg reflectance every few hours. Eggshells gradually decreased in reflectance across the entire measured wavelength spectrum of 250-800 nm. Reflectance peaks were disproportionately affected, such that the height decreased of both the blue-green peak and the smaller UV peak typical of blue-green eggs. The reflectance of lighter eggs was affected slightly more than that of darker eggs. These changes are similar to previous results for changes over long periods of time in darkness, suggesting that light might hasten the same process of pigment degradation that proceeds even without light. Comparison between the experimental light source and both sunlight and typical artificial lighting situations raises the possibility that significant color change might occur during incubation in some birds, but indicates that eggshell illumination in museums for short periods of study is unlikely to affect their color to a detectable extent. Additional research should be performed on eggs of other species and in other light environments, with an eye to an eventual generalized model of the effect of light on eggshell color.
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Affiliation(s)
- Johanna Y. Navarro
- Department of Biology, Queens College, City University of New York, Flushing, New York, United States of America
| | - David C. Lahti
- Department of Biology, Queens College, City University of New York, Flushing, New York, United States of America
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Ruuskanen S, Laaksonen T, Morales J, Moreno J, Mateo R, Belskii E, Bushuev A, Järvinen A, Kerimov A, Krams I, Morosinotto C, Mänd R, Orell M, Qvarnström A, Slate F, Tilgar V, Visser ME, Winkel W, Zang H, Eeva T. Large-scale geographical variation in eggshell metal and calcium content in a passerine bird (Ficedula hypoleuca). ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2014; 21:3304-17. [PMID: 24234761 DOI: 10.1007/s11356-013-2299-0] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2013] [Accepted: 10/28/2013] [Indexed: 05/22/2023]
Abstract
Birds have been used as bioindicators of pollution, such as toxic metals. Levels of pollutants in eggs are especially interesting, as developing birds are more sensitive to detrimental effects of pollutants than adults. Only very few studies have monitored intraspecific, large-scale variation in metal pollution across a species' breeding range. We studied large-scale geographic variation in metal levels in the eggs of a small passerine, the pied flycatcher (Ficedula hypoleuca), sampled from 15 populations across Europe. We measured 10 eggshell elements (As, Cd, Cr, Cu, Ni, Pb, Zn, Se, Sr, and Ca) and several shell characteristics (mass, thickness, porosity, and color). We found significant variation among populations in eggshell metal levels for all metals except copper. Eggshell lead, zinc, and chromium levels decreased from central Europe to the north, in line with the gradient in pollution levels over Europe, thus suggesting that eggshell can be used as an indicator of pollution levels. Eggshell lead levels were also correlated with soil lead levels and pH. Most of the metals were not correlated with eggshell characteristics, with the exception of shell mass, or with breeding success, which may suggest that birds can cope well with the current background exposure levels across Europe.
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