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Emam M, Kumar S, Eslamloo K, Caballero-Solares A, Hall JR, Xue X, Paradis H, Gendron RL, Santander J, Rise ML. Transcriptomic response of lumpfish ( Cyclopterus lumpus) head kidney to viral mimic, with a focus on the interferon regulatory factor family. Front Immunol 2024; 15:1439465. [PMID: 39211041 PMCID: PMC11357929 DOI: 10.3389/fimmu.2024.1439465] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2024] [Accepted: 07/08/2024] [Indexed: 09/04/2024] Open
Abstract
The economic importance of lumpfish (Cyclopterus lumpus) is increasing, but several aspects of its immune responses are not well understood. To discover genes and mechanisms involved in the lumpfish antiviral response, fish were intraperitoneally injected with either the viral mimic polyinosinic:polycytidylic acid [poly(I:C)] or phosphate-buffered saline (PBS; vehicle control), and head kidneys were sampled 24 hours post-injection (hpi) for transcriptomic analyses. RNA sequencing (RNA-Seq) (adjusted p-value <0.05) identified 4,499 upregulated and 3,952 downregulated transcripts in the poly(I:C)-injected fish compared to the PBS-injected fish. Eighteen genes identified as differentially expressed by RNA-Seq were included in a qPCR study that confirmed the upregulation of genes encoding proteins with antiviral immune response functions (e.g., rsad2) and the downregulation of genes (e.g., jarid2b) with potential cellular process functions. In addition, transcript expression levels of 12 members of the interferon regulatory factor (IRF) family [seven of which were identified as poly(I:C)-responsive in this RNA-Seq study] were analyzed using qPCR. Levels of irf1a, irf1b, irf2, irf3, irf4b, irf7, irf8, irf9, and irf10 were significantly higher and levels of irf4a and irf5 were significantly lower in the poly(I:C)-injected fish compared to the PBS-injected fish. This research and associated new genomic resources enhance our understanding of the genes and molecular mechanisms underlying the lumpfish response to viral mimic stimulation and help identify possible therapeutic targets and biomarkers for viral infections in this species.
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Affiliation(s)
- Mohamed Emam
- Department of Ocean Sciences, Memorial University of Newfoundland, St. John’s, NL, Canada
| | - Surendra Kumar
- Department of Ocean Sciences, Memorial University of Newfoundland, St. John’s, NL, Canada
| | - Khalil Eslamloo
- Department of Ocean Sciences, Memorial University of Newfoundland, St. John’s, NL, Canada
- Centre for Marine Applied Research, Dartmouth, NS, Canada
| | | | - Jennifer R. Hall
- Aquatic Research Cluster, Core Research Equipment and Instrument Training (CREAIT) Network, Ocean Sciences Centre, Memorial University of Newfoundland, St. John’s, NL, Canada
| | - Xi Xue
- Department of Ocean Sciences, Memorial University of Newfoundland, St. John’s, NL, Canada
| | - Hélène Paradis
- Faculty of Medicine, Memorial University of Newfoundland, St. John’s, NL, Canada
| | - Robert L. Gendron
- Faculty of Medicine, Memorial University of Newfoundland, St. John’s, NL, Canada
| | - Javier Santander
- Marine Microbial Pathogenesis and Vaccinology Laboratory, Department of Ocean Sciences, Memorial University of Newfoundland, St. John’s, NL, Canada
| | - Matthew L. Rise
- Department of Ocean Sciences, Memorial University of Newfoundland, St. John’s, NL, Canada
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Combe M, Reverter M, Caruso D, Pepey E, Gozlan RE. Impact of Global Warming on the Severity of Viral Diseases: A Potentially Alarming Threat to Sustainable Aquaculture Worldwide. Microorganisms 2023; 11:1049. [PMID: 37110472 PMCID: PMC10146364 DOI: 10.3390/microorganisms11041049] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2023] [Revised: 04/12/2023] [Accepted: 04/13/2023] [Indexed: 04/29/2023] Open
Abstract
With an ever-increasing human population, food security remains a central issue for the coming years. The magnitude of the environmental impacts of food production has motivated the assessment of the environmental and health benefits of shifting diets, from meat to fish and seafood. One of the main concerns for the sustainable development of aquaculture is the emergence and spread of infectious animal diseases in a warming climate. We conducted a meta-analysis to investigate the influence of global warming on mortality due to viral infections in farmed aquatic animals. We found a positive trend between increasing temperature and increasing viral virulence, with an increase in water temperature of 1 °C resulting in an increase in mortality of 1.47-8.33% in OsHV-1 infected oysters, 2.55-6.98% in carps infected with CyHV-3 and 2.18-5.37% in fishes infected with NVVs. We suggest that global warming is going to pose a risk of viral disease outbreaks in aquaculture and could compromise global food security.
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Affiliation(s)
- Marine Combe
- ISEM, Université de Montpellier, CNRS, IRD, 34095 Montpellier, France
| | - Miriam Reverter
- ISEM, Université de Montpellier, CNRS, IRD, 34095 Montpellier, France
- Marine Biology and Ecology Research Centre, School of Biological and Marine Sciences, University of Plymouth, Plymouth PL4 8AA, UK
| | - Domenico Caruso
- ISEM, Université de Montpellier, CNRS, IRD, 34095 Montpellier, France
| | - Elodie Pepey
- ISEM, Université de Montpellier, CNRS, IRD, 34095 Montpellier, France
- CIRAD, UMR ISEM, 34398 Montpellier, France
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Scholz F, Vendramin N, Olesen NJ, Cuenca A, Moesgaard Iburg T, Mirimin L, O'Connor I, Ruane NM, Rodger HD, MacCarthy E. Experimental infection trials with European North Atlantic ranavirus (Iridoviridae) isolated from lumpfish (Cyclopterus lumpus, L.). JOURNAL OF FISH DISEASES 2022; 45:1745-1756. [PMID: 35989490 DOI: 10.1111/jfd.13696] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2022] [Revised: 07/18/2022] [Accepted: 07/22/2022] [Indexed: 06/15/2023]
Abstract
European North Atlantic ranavirus (ENARV, Iridoviridae), is a ranavirus species recently isolated from lumpfish (Cyclopterus lumpus, L.), which are used as cleaner fish in Atlantic salmon (Salmo salar) farming in Northern Europe. This study aimed to investigate (1) the virulence of ENARV isolates from Ireland, Iceland and the Faroe Islands to lumpfish; (2) horizontal transmission between lumpfish; and (3) virulence to Atlantic salmon parr. Lumpfish were challenged in a cohabitation model using intraperitoneally (IP) injected shedders, and naïve cohabitants. IP challenge with isolates from Iceland (1.9 × 107 TCID50 ml-1 ) and the Faroe Islands (5.9 × 107 TCID50 ml-1 ) reduced survival in lumpfish, associated with consistent pathological changes. IP challenge with the Irish strain (8.6 × 105 TCID50 ml-1 ) did not significantly reduce survival in lumpfish, but the lower challenge titre complicated interpretation. Horizontal transmission occurred in all strains tested, but no clinical impact was demonstrated in cohabitants. Salmon parr were challenged by IP injection with the Irish isolate, no virulence or virus replication were demonstrated. A ranavirus qPCR assay, previously validated for fish ranaviruses, was first used to detect ENARV in tissues of both in lumpfish and Atlantic salmon. This study provides the first data on the assessment of virulence of ENARV isolates to lumpfish and salmon, guidelines for the diagnosis of ENARV infection, and poses a basis for further investigations into virulence markers.
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Affiliation(s)
- Felix Scholz
- PHARMAQ Analytiq, Oranmore, Ireland
- Marine and Freshwater Research Centre, Galway-Mayo Institute of Technology, Galway, Ireland
| | - Niccolò Vendramin
- DTU Aqua, National Institute of Aquatic Resources, Copenhagen, Denmark
| | | | - Argelia Cuenca
- DTU Aqua, National Institute of Aquatic Resources, Copenhagen, Denmark
| | | | - Luca Mirimin
- Marine and Freshwater Research Centre, Galway-Mayo Institute of Technology, Galway, Ireland
| | - Ian O'Connor
- Marine and Freshwater Research Centre, Galway-Mayo Institute of Technology, Galway, Ireland
| | | | | | - Eugene MacCarthy
- Marine and Freshwater Research Centre, Galway-Mayo Institute of Technology, Galway, Ireland
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Oral Immunization of Larvae and Juvenile of Lumpfish ( Cyclopterus lumpus) against Vibrio anguillarum Does Not Influence Systemic Immunity. Vaccines (Basel) 2021; 9:vaccines9080819. [PMID: 34451944 PMCID: PMC8402551 DOI: 10.3390/vaccines9080819] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2021] [Revised: 07/13/2021] [Accepted: 07/16/2021] [Indexed: 12/31/2022] Open
Abstract
Vibrio anguillarum, a marine bacterial pathogen that causes vibriosis, is a recurrent pathogen of lumpfish (Cyclopterus lumpus). Lumpfish is utilized as a cleaner fish in the Atlantic salmon (Salmo salar) aquaculture in the North Atlantic region because of its ability to visualize and prey on the ectoparasite sea lice (Lepeophtheirus salmonis) on the skin of Atlantic salmon, and its performance in cold environments. Lumpfish immunity is critical for optimal performance and sea lice removal. Oral vaccine delivery at a young age is the desired method for fish immunization because is easy to use, reduces fish stress during immunization, and can be applied on a large scale while the fish are at a young age. However, the efficacy of orally delivered inactivated vaccines is controversial. In this study, we evaluated the effectiveness of a V. anguillarum bacterin orally delivered to cultured lumpfish and contrasted it to an intraperitoneal (i.p.) boost delivery. We bio-encapsulated V. anguillarum bacterin in Artemia salina live-feed and orally immunized lumpfish larvae. Vaccine intake and immune response were evaluated by microscopy and quantitative polymerase chain reaction (qPCR) analysis, respectively. qPCR analyses showed that the oral immunization of lumpfish larvae resulted in a subtle stimulation of canonical immune transcripts such as il8b, il10, igha, ighmc, ighb, ccl19, ccl20, cd8a, cd74, ifng, and lgp2. Nine months after oral immunization, one group was orally boosted, and a second group was both orally and i.p. boosted. Two months after boost immunization, lumpfish were challenged with V. anguillarum (7.8 × 105 CFU dose−1). Orally boosted fish showed a relative percentage of survival (RPS) of 2%. In contrast, the oral and i.p. boosted group showed a RPS of 75.5% (p < 0.0001). V. anguillarum bacterin that had been orally delivered was not effective in lumpfish, which is in contrast to the i.p. delivered bacterin that protected the lumpfish against vibriosis. This suggests that orally administered V. anguillarum bacterin did not reach the deep lymphoid tissues, either in the larvae or juvenile fish, therefore oral immunization was not effective. Oral vaccines that are capable of crossing the epithelium and reach deep lymphoid tissues are required to confer an effective protection to lumpfish against V. anguillarum
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Barsøe S, Toffan A, Pascoli F, Stratmann A, Pretto T, Marsella A, Er-Rafik M, Vendramin N, Olesen NJ, Sepúlveda D, Lorenzen N. Long-Term Protection and Serologic Response of European Sea Bass Vaccinated with a Betanodavirus Virus-Like Particle Produced in Pichia pastoris. Vaccines (Basel) 2021; 9:vaccines9050447. [PMID: 34063318 PMCID: PMC8147411 DOI: 10.3390/vaccines9050447] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2021] [Revised: 04/22/2021] [Accepted: 04/23/2021] [Indexed: 01/10/2023] Open
Abstract
Viral Nervous Necrosis (VNN) causes high mortality and reduced growth in farmed European sea bass (Dicentrarchus labrax) in the Mediterranean. In the current studies, we tested a novel Pichia-produced virus-like particle (VLP) vaccine against VNN in European sea bass, caused by the betanodavirus “Red-Spotted Grouper Nervous Necrosis Virus” (RGNNV). European sea bass were immunized with a VLP-based vaccine formulated with different concentrations of antigen and with or without adjuvant. Antibody response was evaluated by ELISA and serum neutralization. The efficacy of these VLP-vaccine formulations was evaluated by an intramuscular challenge with RGNNV at different time points (1, 2 and 10 months post-vaccination) and both dead and surviving fish were sampled to evaluate the level of viable virus in the brain. The VLP-based vaccines induced an effective protective immunity against experimental infection at 2 months post-vaccination, and even to some degree at 10 months post-vaccination. Furthermore, the vaccine formulations triggered a dose-dependent response in neutralizing antibodies. Serologic response and clinical efficacy, measured as relative percent survival (RPS), seem to be correlated with the administered dose, although for the individual fish, a high titer of neutralizing antibodies prior to challenge was not always enough to protect against disease. The efficacy of the VLP vaccine could not be improved by formulation with a water-in-oil (W/O) adjuvant. The developed RGNNV-VLPs show a promising effect as a vaccine candidate, even without adjuvant, to protect sea bass against disease caused by RGNNV. However, detection of virus in vaccinated survivors means that it cannot be ruled out that survivors can transmit the virus.
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Affiliation(s)
- Sofie Barsøe
- National Institute of Aquatic Resources (DTU AQUA), Technical University of Denmark, 2800 Lyngby, Denmark; (S.B.); (N.V.); (N.J.O.); (D.S.)
| | - Anna Toffan
- Istituto Zooprofilattico Sperimentale delle Venezie (IZSVe), 35020 Legnaro, Padua, Italy; (A.T.); (F.P.); (T.P.); (A.M.)
| | - Francesco Pascoli
- Istituto Zooprofilattico Sperimentale delle Venezie (IZSVe), 35020 Legnaro, Padua, Italy; (A.T.); (F.P.); (T.P.); (A.M.)
| | | | - Tobia Pretto
- Istituto Zooprofilattico Sperimentale delle Venezie (IZSVe), 35020 Legnaro, Padua, Italy; (A.T.); (F.P.); (T.P.); (A.M.)
| | - Andrea Marsella
- Istituto Zooprofilattico Sperimentale delle Venezie (IZSVe), 35020 Legnaro, Padua, Italy; (A.T.); (F.P.); (T.P.); (A.M.)
| | - Mériem Er-Rafik
- National Center for Nano Fabrication and Characterization (DTU Nanolab), Technical University of Denmark, 2800 Lyngby, Denmark;
| | - Niccolò Vendramin
- National Institute of Aquatic Resources (DTU AQUA), Technical University of Denmark, 2800 Lyngby, Denmark; (S.B.); (N.V.); (N.J.O.); (D.S.)
| | - Niels J. Olesen
- National Institute of Aquatic Resources (DTU AQUA), Technical University of Denmark, 2800 Lyngby, Denmark; (S.B.); (N.V.); (N.J.O.); (D.S.)
| | - Dagoberto Sepúlveda
- National Institute of Aquatic Resources (DTU AQUA), Technical University of Denmark, 2800 Lyngby, Denmark; (S.B.); (N.V.); (N.J.O.); (D.S.)
| | - Niels Lorenzen
- National Institute of Aquatic Resources (DTU AQUA), Technical University of Denmark, 2800 Lyngby, Denmark; (S.B.); (N.V.); (N.J.O.); (D.S.)
- Correspondence:
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Boukedjouta R, Pretto T, Abbadi M, Biasini L, Toffan A, Mezali K. Viral encephalopathy and retinopathy is endemic in wild groupers (genus Epinephelus spp.) of the Algerian coast. JOURNAL OF FISH DISEASES 2020; 43:801-812. [PMID: 32462696 DOI: 10.1111/jfd.13181] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/09/2020] [Revised: 04/29/2020] [Accepted: 04/30/2020] [Indexed: 05/07/2023]
Abstract
This work describes betanodavirus infection in two species of groupers (family Serranidae) from the Algerian coast: the dusky grouper Epinephelus marginatus and the golden grouper Epinephelus costae. At necropsy, characteristic clinical signs, external injuries, clouded eyes and brain congestion, generally associated with viral encephalopathy and retinopathy (VER) infection were observed. The partial sequences of RNA1 and RNA2 from two viral strains were obtained, and the phylogenetic analysis revealed the presence of the red-spotted grouper nervous necrosis virus (RGNNV) genotype closely related to strains previously detected in groupers in the same geographic area. Results obtained in this study support the hypothesis that VER disease is endemic in the Algerian grouper population.
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Affiliation(s)
- Rachid Boukedjouta
- Department of Marine Science and Aquaculture, Faculty of Natural Sciences and Life, Protection, Valorization of Coastal Marine Resources and Molecular Systematics Laboratory, Université Abdelhamid Ibn Badis - Mostaganem, Mostaganem, Algeria
- National Centre for Research and Development of Fisheries and Aquaculture (NCRDFA), Bou-Ismaïl, Algeria
| | - Tobia Pretto
- Istituto Zooprofilattico Sperimentale delle Venezie (IZSVe), OIE Reference Laboratory for Viral Encephalopathy and Retinopathy, Legnaro (Padova), Italy
| | - Miriam Abbadi
- Istituto Zooprofilattico Sperimentale delle Venezie (IZSVe), OIE Reference Laboratory for Viral Encephalopathy and Retinopathy, Legnaro (Padova), Italy
| | - Lorena Biasini
- Istituto Zooprofilattico Sperimentale delle Venezie (IZSVe), OIE Reference Laboratory for Viral Encephalopathy and Retinopathy, Legnaro (Padova), Italy
| | - Anna Toffan
- Istituto Zooprofilattico Sperimentale delle Venezie (IZSVe), OIE Reference Laboratory for Viral Encephalopathy and Retinopathy, Legnaro (Padova), Italy
| | - Karim Mezali
- Department of Marine Science and Aquaculture, Faculty of Natural Sciences and Life, Protection, Valorization of Coastal Marine Resources and Molecular Systematics Laboratory, Université Abdelhamid Ibn Badis - Mostaganem, Mostaganem, Algeria
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