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Holt NM, Byrne MF. The Role of Artificial Intelligence and Big Data for Gastrointestinal Disease. Gastrointest Endosc Clin N Am 2025; 35:291-308. [PMID: 40021230 DOI: 10.1016/j.giec.2024.09.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/03/2025]
Abstract
Artificial intelligence (AI) is a rapidly evolving presence in all fields and industries, with the ability to both improve quality and reduce the burden of human effort. Gastroenterology is a field with a focus on diagnostic techniques and procedures, and AI and big data have established and growing roles to play. Alongside these opportunities are challenges, which will evolve in parallel.
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Affiliation(s)
- Nicholas Mathew Holt
- Gastroenterology and Hepatology Unit, The Canberra Hospital, Yamba Drive, Garran, ACT 2605, Australia.
| | - Michael Francis Byrne
- Division of Gastroenterology, Vancouver General Hospital, University of British Columbia, UBC Division of Gastroenterology, 5153 - 2775 Laurel Street, Vancouver, British Columbia V5Z 1M9, Canada
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Jain A, Pabba M, Jain A, Singh S, Ali H, Vinayek R, Aswath G, Sharma N, Inamdar S, Facciorusso A. Impact of Artificial Intelligence on Pancreaticobiliary Endoscopy. Cancers (Basel) 2025; 17:379. [PMID: 39941748 PMCID: PMC11815774 DOI: 10.3390/cancers17030379] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2024] [Revised: 01/20/2025] [Accepted: 01/23/2025] [Indexed: 02/16/2025] Open
Abstract
Pancreaticobiliary diseases can lead to significant morbidity and their diagnoses rely on imaging and endoscopy which are dependent on operator expertise. Artificial intelligence (AI) has seen a rapid uptake in the field of luminal endoscopy, such as polyp detection during colonoscopy. However, its use for pancreaticobiliary endoscopic modalities such as endoscopic ultrasound (EUS) and cholangioscopy remains scarce, with only few studies available. In this review, we delve into the current evidence, benefits, limitations, and future scope of AI technologies in pancreaticobiliary endoscopy.
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Affiliation(s)
- Aryan Jain
- Department of Gastroenterology, Albany Medical College, Albany, NY 12208, USA; (A.J.); (M.P.); (A.J.)
| | - Mayur Pabba
- Department of Gastroenterology, Albany Medical College, Albany, NY 12208, USA; (A.J.); (M.P.); (A.J.)
| | - Aditya Jain
- Department of Gastroenterology, Albany Medical College, Albany, NY 12208, USA; (A.J.); (M.P.); (A.J.)
| | - Sahib Singh
- Department of Internal Medicine, Sinai Hospital of Baltimore, Baltimore, MD 21215, USA
| | - Hassam Ali
- Department of Gastroenterology, ECU Health Medical Center/Brody School of Medicine, Greenville, NC 27834, USA;
| | - Rakesh Vinayek
- Department of Gastroenterology, Sinai Hospital of Baltimore, Baltimore, MD 21215, USA;
| | - Ganesh Aswath
- Department of Gastroenterology, State University of New York Upstate Medical University, Syracuse, NY 13210, USA;
| | - Neil Sharma
- Department of Gastroenterology, Indiana University School of Medicine, Indianapolis, IN 46202, USA;
| | - Sumant Inamdar
- Department of Gastroenterology, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA;
| | - Antonio Facciorusso
- Gastroenterology Unit, Department of Experimental Medicine, University of Salento, 73100 Lecce, Italy;
- Clinical Effectiveness Research Group, Faculty of Medicine, Institute of Health and Society, University of Oslo, 0373 Oslo, Norway
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Brenner AR, Laoveeravat P, Carey PJ, Joiner D, Mardini SH, Jovani M. Artificial intelligence using advanced imaging techniques and cholangiocarcinoma: Recent advances and future direction. Artif Intell Gastroenterol 2022; 3:88-95. [DOI: 10.35712/aig.v3.i3.88] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/07/2022] [Revised: 04/16/2022] [Accepted: 05/08/2022] [Indexed: 02/06/2023] Open
Abstract
While cholangiocarcinoma represents only about 3% of all gastrointestinal tumors, it has a dismal survival rate, usually because it is diagnosed at a late stage. The utilization of Artificial Intelligence (AI) in medicine in general, and in gastroenterology has made gigantic steps. However, the application of AI for biliary disease, in particular for cholangiocarcinoma, has been sub-optimal. The use of AI in combination with clinical data, cross-sectional imaging (computed tomography, magnetic resonance imaging) and endoscopy (endoscopic ultrasound and cholangioscopy) has the potential to significantly improve early diagnosis and the choice of optimal therapeutic options, leading to a transformation in the prognosis of this feared disease. In this review we summarize the current knowledge on the use of AI for the diagnosis and management of cholangiocarcinoma and point to future directions in the field.
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Affiliation(s)
- Aaron R Brenner
- Department of Internal Medicine, University of Kentucky College of Medicine, Lexington, KY 40536, United States
| | - Passisd Laoveeravat
- Division of Digestive Diseases and Nutrition, University of Kentucky College of Medicine, Lexington, KY 40536, United States
| | - Patrick J Carey
- Department of Internal Medicine, University of Kentucky College of Medicine, Lexington, KY 40536, United States
| | - Danielle Joiner
- Department of Internal Medicine, University of Kentucky College of Medicine, Lexington, KY 40536, United States
| | - Samuel H Mardini
- Division of Digestive Diseases and Nutrition, University of Kentucky College of Medicine, Lexington, KENTUCKY 40536, United States
| | - Manol Jovani
- Digestive Diseases and Nutrition, University of Kentucky Albert B. Chandler Hospital, Lexington, KY 40536, United States
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Kui B, Pintér J, Molontay R, Nagy M, Farkas N, Gede N, Vincze Á, Bajor J, Gódi S, Czimmer J, Szabó I, Illés A, Sarlós P, Hágendorn R, Pár G, Papp M, Vitális Z, Kovács G, Fehér E, Földi I, Izbéki F, Gajdán L, Fejes R, Németh BC, Török I, Farkas H, Mickevicius A, Sallinen V, Galeev S, Ramírez‐Maldonado E, Párniczky A, Erőss B, Hegyi PJ, Márta K, Váncsa S, Sutton R, Szatmary P, Latawiec D, Halloran C, de‐Madaria E, Pando E, Alberti P, Gómez‐Jurado MJ, Tantau A, Szentesi A, Hegyi P. EASY-APP: An artificial intelligence model and application for early and easy prediction of severity in acute pancreatitis. Clin Transl Med 2022; 12:e842. [PMID: 35653504 PMCID: PMC9162438 DOI: 10.1002/ctm2.842] [Citation(s) in RCA: 30] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2022] [Revised: 04/06/2022] [Accepted: 04/11/2022] [Indexed: 12/17/2022] Open
Abstract
BACKGROUND Acute pancreatitis (AP) is a potentially severe or even fatal inflammation of the pancreas. Early identification of patients at high risk for developing a severe course of the disease is crucial for preventing organ failure and death. Most of the former predictive scores require many parameters or at least 24 h to predict the severity; therefore, the early therapeutic window is often missed. METHODS The early achievable severity index (EASY) is a multicentre, multinational, prospective and observational study (ISRCTN10525246). The predictions were made using machine learning models. We used the scikit-learn, xgboost and catboost Python packages for modelling. We evaluated our models using fourfold cross-validation, and the receiver operating characteristic (ROC) curve, the area under the ROC curve (AUC), and accuracy metrics were calculated on the union of the test sets of the cross-validation. The most critical factors and their contribution to the prediction were identified using a modern tool of explainable artificial intelligence called SHapley Additive exPlanations (SHAP). RESULTS The prediction model was based on an international cohort of 1184 patients and a validation cohort of 3543 patients. The best performing model was an XGBoost classifier with an average AUC score of 0.81 ± 0.033 and an accuracy of 89.1%, and the model improved with experience. The six most influential features were the respiratory rate, body temperature, abdominal muscular reflex, gender, age and glucose level. Using the XGBoost machine learning algorithm for prediction, the SHAP values for the explanation and the bootstrapping method to estimate confidence, we developed a free and easy-to-use web application in the Streamlit Python-based framework (http://easy-app.org/). CONCLUSIONS The EASY prediction score is a practical tool for identifying patients at high risk for severe AP within hours of hospital admission. The web application is available for clinicians and contributes to the improvement of the model.
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Affiliation(s)
- Balázs Kui
- Department of MedicineUniversity of SzegedSzegedHungary
- Centre for Translational Medicine, Department of MedicineUniversity of SzegedSzegedHungary
| | - József Pintér
- Department of Stochastics, Institute of MathematicsBudapest University of Technology and EconomicsBudapestHungary
| | - Roland Molontay
- Department of Stochastics, Institute of MathematicsBudapest University of Technology and EconomicsBudapestHungary
- MTA‐BME Stochastics Research GroupBudapestHungary
| | - Marcell Nagy
- Department of Stochastics, Institute of MathematicsBudapest University of Technology and EconomicsBudapestHungary
| | - Nelli Farkas
- Institute for Translational Medicine, Szentágothai Research Centre, Medical SchoolUniversity of PécsPécsHungary
- Institute of Bioanalysis, Medical SchoolUniversity of PécsPécsHungary
| | - Noémi Gede
- Institute for Translational Medicine, Szentágothai Research Centre, Medical SchoolUniversity of PécsPécsHungary
| | - Áron Vincze
- Division of Gastroenterology, First Department of MedicineUniversity of Pécs, Medical SchoolPécsHungary
| | - Judit Bajor
- Division of Gastroenterology, First Department of MedicineUniversity of Pécs, Medical SchoolPécsHungary
| | - Szilárd Gódi
- Division of Gastroenterology, First Department of MedicineUniversity of Pécs, Medical SchoolPécsHungary
| | - József Czimmer
- Division of Gastroenterology, First Department of MedicineUniversity of Pécs, Medical SchoolPécsHungary
| | - Imre Szabó
- Division of Gastroenterology, First Department of MedicineUniversity of Pécs, Medical SchoolPécsHungary
| | - Anita Illés
- Division of Gastroenterology, First Department of MedicineUniversity of Pécs, Medical SchoolPécsHungary
| | - Patrícia Sarlós
- Division of Gastroenterology, First Department of MedicineUniversity of Pécs, Medical SchoolPécsHungary
| | - Roland Hágendorn
- Division of Gastroenterology, First Department of MedicineUniversity of Pécs, Medical SchoolPécsHungary
| | - Gabriella Pár
- Division of Gastroenterology, First Department of MedicineUniversity of Pécs, Medical SchoolPécsHungary
| | - Mária Papp
- Department of Gastroenterology, Institute of Internal Medicine, Faculty of MedicineUniversity of DebrecenDebrecenHungary
| | - Zsuzsanna Vitális
- Department of Gastroenterology, Institute of Internal Medicine, Faculty of MedicineUniversity of DebrecenDebrecenHungary
| | - György Kovács
- Department of Gastroenterology, Institute of Internal Medicine, Faculty of MedicineUniversity of DebrecenDebrecenHungary
| | - Eszter Fehér
- Department of Gastroenterology, Institute of Internal Medicine, Faculty of MedicineUniversity of DebrecenDebrecenHungary
| | - Ildikó Földi
- Department of Gastroenterology, Institute of Internal Medicine, Faculty of MedicineUniversity of DebrecenDebrecenHungary
| | - Ferenc Izbéki
- Szent György Teaching Hospital of County FejérSzékesfehérvárHungary
| | - László Gajdán
- Szent György Teaching Hospital of County FejérSzékesfehérvárHungary
| | - Roland Fejes
- Szent György Teaching Hospital of County FejérSzékesfehérvárHungary
| | - Balázs Csaba Németh
- Department of MedicineUniversity of SzegedSzegedHungary
- Centre for Translational Medicine, Department of MedicineUniversity of SzegedSzegedHungary
| | - Imola Török
- County Emergency Clinical Hospital of Târgu Mures—Gastroenterology Clinic and University of Medicine, Pharmacy, Sciences and Technology ‘George Emil Palade’Targu MuresRomania
| | - Hunor Farkas
- County Emergency Clinical Hospital of Târgu Mures—Gastroenterology Clinic and University of Medicine, Pharmacy, Sciences and Technology ‘George Emil Palade’Targu MuresRomania
| | | | - Ville Sallinen
- Department of Transplantation and Liver SurgeryHelsinki University Hospital and University of HelsinkiHelsinkiFinland
| | | | | | - Andrea Párniczky
- Institute for Translational Medicine, Szentágothai Research Centre, Medical SchoolUniversity of PécsPécsHungary
- Heim Pál National Pediatric InstituteBudapestHungary
| | - Bálint Erőss
- Institute for Translational Medicine, Szentágothai Research Centre, Medical SchoolUniversity of PécsPécsHungary
- Division of Pancreatic Diseases, Heart and Vascular CentreSemmelweis UniversityBudapestHungary
- Centre for Translational MedicineSemmelweis UniversityBudapestHungary
| | - Péter Jenő Hegyi
- Institute for Translational Medicine, Szentágothai Research Centre, Medical SchoolUniversity of PécsPécsHungary
- Division of Pancreatic Diseases, Heart and Vascular CentreSemmelweis UniversityBudapestHungary
| | - Katalin Márta
- Division of Pancreatic Diseases, Heart and Vascular CentreSemmelweis UniversityBudapestHungary
- Centre for Translational MedicineSemmelweis UniversityBudapestHungary
| | - Szilárd Váncsa
- Institute for Translational Medicine, Szentágothai Research Centre, Medical SchoolUniversity of PécsPécsHungary
- Division of Pancreatic Diseases, Heart and Vascular CentreSemmelweis UniversityBudapestHungary
- Centre for Translational MedicineSemmelweis UniversityBudapestHungary
| | - Robert Sutton
- Institute of Systems, Molecular and Integrative BiologyUniversity of Liverpool and Liverpool University Hospitals NHS Foundation Trust, Liverpool, EnglandUK
| | - Peter Szatmary
- Institute of Systems, Molecular and Integrative BiologyUniversity of Liverpool and Liverpool University Hospitals NHS Foundation Trust, Liverpool, EnglandUK
| | - Diane Latawiec
- Institute of Systems, Molecular and Integrative BiologyUniversity of Liverpool and Liverpool University Hospitals NHS Foundation Trust, Liverpool, EnglandUK
| | - Chris Halloran
- Institute of Systems, Molecular and Integrative BiologyUniversity of Liverpool and Liverpool University Hospitals NHS Foundation Trust, Liverpool, EnglandUK
| | - Enrique de‐Madaria
- Gastroenterology DepartmentAlicante University General HospitalISABIALAlicanteSpain
| | - Elizabeth Pando
- Department of Hepato‐Pancreato‐Biliary and Transplant SurgeryHospital Universitari Vall d'Hebron, Universitat Autònoma de BarcelonaBarcelonaSpain
| | - Piero Alberti
- Department of Hepato‐Pancreato‐Biliary and Transplant SurgeryHospital Universitari Vall d'Hebron, Universitat Autònoma de BarcelonaBarcelonaSpain
| | - Maria José Gómez‐Jurado
- Department of Hepato‐Pancreato‐Biliary and Transplant SurgeryHospital Universitari Vall d'Hebron, Universitat Autònoma de BarcelonaBarcelonaSpain
| | - Alina Tantau
- The 4th Medical ClinicIuliu Hatieganu’ University of Medicine and PharmacyCluj‐NapocaRomania
- Gastroenterology and Hepatology Medical CenterCluj‐NapocaRomania
| | - Andrea Szentesi
- Centre for Translational Medicine, Department of MedicineUniversity of SzegedSzegedHungary
- Institute for Translational Medicine, Szentágothai Research Centre, Medical SchoolUniversity of PécsPécsHungary
| | - Péter Hegyi
- Institute for Translational Medicine, Szentágothai Research Centre, Medical SchoolUniversity of PécsPécsHungary
- Division of Pancreatic Diseases, Heart and Vascular CentreSemmelweis UniversityBudapestHungary
- Centre for Translational MedicineSemmelweis UniversityBudapestHungary
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Ang TL, Wang LM. The evolving role of EUS-guided tissue acquisition. J Dig Dis 2021; 22:204-213. [PMID: 33611846 DOI: 10.1111/1751-2980.12976] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/28/2021] [Accepted: 02/19/2021] [Indexed: 12/11/2022]
Abstract
The introduction of endoscopic ultrasound-guided fine-needle aspiration into clinical practice was a pivotal moment for diagnostic gastrointestinal endoscopy. It facilitates the ease of tissue acquisition from previously inaccessible sites. The performance characteristics of cytological diagnosis are excellent. However, there remain areas of inadequacies. These include procedural inefficiencies such as the need for rapid on-site cytological evaluation or macroscopic on-site evaluation, the crucial role of histology for diagnosis in specific conditions, the issue of sampling errors and the need for repeat procedures, and the shift towards personalized medicine, which requires histology, immunohistochemical studies, and molecular analysis. The original Trucut biopsy needle had been cumbersome to use, but the recent introduction of newer-generation biopsy needles has transformed the landscape, such that there is now a greater focus on tissue acquisition for histological assessment. Concomitant technological advances of endoscopic ultrasound processors enabled higher-resolution imaging, and facilitated image enhancement using contrast harmonic endoscopic ultrasound and endoscopic ultrasound elastography. These techniques can be used as an adjunct to guide tissue acquisition in challenging situations. There is ongoing research on the use of artificial intelligence to complement diagnostic endoscopic ultrasound and the early data are promising. Artificial intelligence may be especially important to guide clinical decision-making if biopsy results are nondiagnostic.
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Affiliation(s)
- Tiing Leong Ang
- Department of Gastroenterology and Hepatology, Changi General Hospital; Medicine Academic Clinical Programme, SingHealth Duke-NUS Academic Medical Centre; Yong Loo Lin School of Medicine, National University of Singapore, Singapore
| | - Lai Mun Wang
- Department of Laboratory Medicine, Section of Pathology, Changi General Hospital; Pathology Academic Clinical Programme, SingHealth Duke-NUS Academic Medical Centre, Singapore
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Ang TL, Carneiro G. Artificial intelligence in gastrointestinal endoscopy. J Gastroenterol Hepatol 2021; 36:5-6. [PMID: 33448513 DOI: 10.1111/jgh.15344] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/10/2020] [Accepted: 11/11/2020] [Indexed: 12/20/2022]
Affiliation(s)
- Tiing Leong Ang
- Department of Gastroenterology and Hepatology, Changi General Hospital, Singapore.,Medicine Academic Clinical Programme, SingHealth Duke-NUS Academic Medical Centre, Singapore.,Yong Loo Lin School of Medicine, National University of Singapore, Singapore
| | - Gustavo Carneiro
- Australian Institute for Machine Learning, School of Computer Science, University of Adelaide, Adelaide, South Australia, Australia
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