1
|
Gao Y, Qu Q, Liu N, Sun M, Liu X, Cao Z, Dong J. Genome identification of the LRR-RLK gene family in maize (Zea mays) and expression analysis in response to Fusarium verticillioides infection. BMC PLANT BIOLOGY 2025; 25:524. [PMID: 40275175 PMCID: PMC12023693 DOI: 10.1186/s12870-025-06495-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2025] [Accepted: 04/01/2025] [Indexed: 04/26/2025]
Abstract
BACKGROUND Plant leucine-rich repeat receptor-like kinases (LRR-RLKs) are a ubiquitous class of proteins in plants. These receptors are primarily responsible for recognizing pathogen-associated molecular patterns (PAMPs) and are crucial for regulating plant growth, development, and immune responses. Fusarium verticillioides, a significant maize pathogen, causes diseases such as ear rot and stalk rot. However, the expression patterns of LRR-RLK in maize following F. verticillioides infection remain unclear. RESULTS A total of 205 maize LRR-RLK gene family members from 15 subfamilies were identified. The gene structures, physicochemical properties, and conserved motifs of these LRR-RLKs were thoroughly analyzed. Co-expression analysis of the LRR-RLK genes suggested that the gene family may have expanded through gene duplication, with relatively high co-expression observed in closely related species. To explore their expression patterns, we conducted comprehensive tissue expression profiling, revealing significant variation in expression levels across different tissues. Using transcriptome sequencing, we obtained the expression profiles of LRR-RLK genes at different time points after F. verticillioides infection in maize. The expression levels of these genes exhibited significant changes following inoculation. Notably, genes such as Zm00001d027645, Zm00001d032116, Zm00001d032244, Zm00001d030323, Zm00001d031427, Zm00001d030981, Zm00001d031201, Zm00001d032344, and Zm00001d032745 showed marked alterations, indicating their potential involvement in resistance to F. verticillioides infection. CONCLUSIONS In this study, we systematically identified members of the LRR-RLK gene family in maize and characterized the biological information of selected family members. Additionally, our data revealed that certain LRR-RLK family members in maize responded to F. verticillioides infection, with their expression levels being significantly up-regulated.
Collapse
Affiliation(s)
- Yiao Gao
- State Key Laboratory of North China Crop Improvement and Regulation, College of Plant Protection, Hebei Agricultural University, Baoding, 071001, China
| | - Qing Qu
- Hebei North University, Zhangjiakou, 075000, China
| | - Ning Liu
- State Key Laboratory of North China Crop Improvement and Regulation, College of Plant Protection, Hebei Agricultural University, Baoding, 071001, China
| | - Manli Sun
- State Key Laboratory of North China Crop Improvement and Regulation, College of Plant Protection, Hebei Agricultural University, Baoding, 071001, China
| | - Xinfang Liu
- Corn Research Institute, Liaoning Academy of Agricultural Sciences, Shenyang, 110161, China.
| | - Zhiyan Cao
- State Key Laboratory of North China Crop Improvement and Regulation, College of Plant Protection, Hebei Agricultural University, Baoding, 071001, China.
| | - Jingao Dong
- State Key Laboratory of North China Crop Improvement and Regulation, College of Plant Protection, Hebei Agricultural University, Baoding, 071001, China.
| |
Collapse
|
2
|
Gregory GA, Coomey JH, Khahani B, Gonze D, Omran S, McGillivray KA, Stewart CE, Gardner KA, Follette D, Hazen SP. Temperature signals drive grass secondary cell wall thickening. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2025.04.03.647122. [PMID: 40236254 PMCID: PMC11996453 DOI: 10.1101/2025.04.03.647122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/17/2025]
Abstract
In grasses, stem elongation is driven by intercalary meristems at node-internode junctions, where cells divide, elongate, and in some cell types secondary wall maturation. Cellulose is the predominant polymer in plant cells and the most abundant biopolymer on Earth. It is synthesized at the plasma membrane by multi-protein complexes that include CELLULOSE SYNTHASE A (CESA) proteins. To investigate the spatiotemporal regulation of cellulose deposition during development, we developed a CESA8 luciferase gene expression reporter system in Brachypodium distachyon . High bioluminescence was observed in stem nodes, a specific region of elongating internodes, and the inflorescence, indicating sites of active secondary wall deposition. Within internodes, luminescence followed a distinct pattern, with a "dark zone" directly above the node with minimal signal, followed by a "bright zone" approximately 5 mm above the node where bioluminescence peaked. Histological, biophysical, and transcript analysis confirmed that luminescence intensity correlates with thickened secondary cell walls, increased cellulose crystallinity, and elevated CESA8 transcript levels. Time-lapse imaging revealed that CESA8 expression follows a robust diurnal rhythm governed by thermocycles alone, with peak expression occurring in the early morning. Temperature pulse experiments revealed an immediate but transient response of CESA8 to temperature shifts, which we modeled as an incoherent feed-forward loop. Finally, we found a strong correlation between CESA8 expression and stem elongation, highlighting the role of secondary cell wall thickening in supporting upright growth. These findings provide new insights into the regulation of secondary wall formation and its integration with environmental cues, advancing our understanding of grass stem development. SIGNIFICANCE Understanding how grasses build strong stems is essential for improving biomass production and crop resilience. In grasses, stem elongation and secondary cell wall thickening occur in distinct zones, yet the precise timing and regulation of this process remain unclear. To investigate this phenomenon, we developed a real-time imaging system to track the expression of CESA8 , a key gene involved in cellulose synthesis. Our findings reveal that secondary wall thickening follows a daily rhythm controlled by temperature rather than light. These insights provide a foundation for optimizing plant architecture in bioenergy crops, improving their efficiency and sustainability.
Collapse
|
3
|
Li W, Wei J, Lei Y, Yang Z, Zhang S, Feng J, Li Y, Liu Y, Sheng H. Phosphorylation of cellulose synthases in plant responses to environmental changes. Int J Biol Macromol 2025; 292:139313. [PMID: 39740718 DOI: 10.1016/j.ijbiomac.2024.139313] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2024] [Revised: 12/08/2024] [Accepted: 12/28/2024] [Indexed: 01/02/2025]
Abstract
Cellulose, synthesized by cellulose synthase (CESA) complexes, is an essential component of plant cell walls; defects in cellulose synthesis compromise cell wall integrity. The maintenance of this integrity is vital for plant growth, development, and stress responses. Consequently, plants must continuously synthesize and remodel their cell walls, a process intricately linked to cellulose biosynthesis. Phosphorylation modifications at specific sites on cellulose synthase represent a critical regulatory mechanism governing the dynamics of CESA complexes. In this minireview, we summarize the phosphorylation sites responsive to environmental factors in CESAs and discuss how alterations in phosphorylation status influence plant adaptation to environmental conditions as well as the dynamics of CESA complexes. Additionally, we propose potential upstream kinases targeting CESAs along with their respective target sites. Our efforts aim to enhance understanding of CESA phosphorylation's role in facilitating plant adaptation to environmental challenges.
Collapse
Affiliation(s)
- Wenbing Li
- Institute of Qinghai-Tibetan Plateau, Southwest Minzu University, Chengdu, Sichuan 610225, PR China; Sichuan Provincial Qiang-Yi Medicinal Resources Protection and Utilization Technology and Engineering Laboratory, Southwest Minzu University, Chengdu, Sichuan 610225, PR China
| | - Jing Wei
- Institute of Qinghai-Tibetan Plateau, Southwest Minzu University, Chengdu, Sichuan 610225, PR China; Sichuan Provincial Qiang-Yi Medicinal Resources Protection and Utilization Technology and Engineering Laboratory, Southwest Minzu University, Chengdu, Sichuan 610225, PR China
| | - Yuyan Lei
- Institute of Qinghai-Tibetan Plateau, Southwest Minzu University, Chengdu, Sichuan 610225, PR China; Sichuan Provincial Qiang-Yi Medicinal Resources Protection and Utilization Technology and Engineering Laboratory, Southwest Minzu University, Chengdu, Sichuan 610225, PR China
| | - Zhengming Yang
- Institute of Qinghai-Tibetan Plateau, Southwest Minzu University, Chengdu, Sichuan 610225, PR China; Sichuan Provincial Qiang-Yi Medicinal Resources Protection and Utilization Technology and Engineering Laboratory, Southwest Minzu University, Chengdu, Sichuan 610225, PR China
| | - Shaoshan Zhang
- Institute of Qinghai-Tibetan Plateau, Southwest Minzu University, Chengdu, Sichuan 610225, PR China; Sichuan Provincial Qiang-Yi Medicinal Resources Protection and Utilization Technology and Engineering Laboratory, Southwest Minzu University, Chengdu, Sichuan 610225, PR China
| | - Jingqiu Feng
- Institute of Qinghai-Tibetan Plateau, Southwest Minzu University, Chengdu, Sichuan 610225, PR China; Sichuan Provincial Qiang-Yi Medicinal Resources Protection and Utilization Technology and Engineering Laboratory, Southwest Minzu University, Chengdu, Sichuan 610225, PR China
| | - Ying Li
- Institute of Qinghai-Tibetan Plateau, Southwest Minzu University, Chengdu, Sichuan 610225, PR China; Sichuan Provincial Qiang-Yi Medicinal Resources Protection and Utilization Technology and Engineering Laboratory, Southwest Minzu University, Chengdu, Sichuan 610225, PR China
| | - Yuan Liu
- Institute of Qinghai-Tibetan Plateau, Southwest Minzu University, Chengdu, Sichuan 610225, PR China; Sichuan Provincial Qiang-Yi Medicinal Resources Protection and Utilization Technology and Engineering Laboratory, Southwest Minzu University, Chengdu, Sichuan 610225, PR China.
| | - Huachun Sheng
- Institute of Qinghai-Tibetan Plateau, Southwest Minzu University, Chengdu, Sichuan 610225, PR China; Sichuan Provincial Qiang-Yi Medicinal Resources Protection and Utilization Technology and Engineering Laboratory, Southwest Minzu University, Chengdu, Sichuan 610225, PR China.
| |
Collapse
|
4
|
Liu J, Shen Y, Liu J, Xu D, Chang CY, Wang J, Zhou J, Haffty BG, Zhang L, Bargonetti J, De S, Hu W, Feng Z. Lipogenic enzyme FASN promotes mutant p53 accumulation and gain-of-function through palmitoylation. Nat Commun 2025; 16:1762. [PMID: 39971971 PMCID: PMC11839913 DOI: 10.1038/s41467-025-57099-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2023] [Accepted: 02/11/2025] [Indexed: 02/21/2025] Open
Abstract
The tumor-suppressive function of p53 is frequently disrupted by mutations in cancers. Missense mutant p53 (mutp53) protein often stabilizes and accumulates to high levels in cancers to promote tumorigenesis through the gain-of-function (GOF) mechanism. Currently, the mechanism of mutp53 accumulation and GOF is incompletely understood. Here, we identify the lipogenic enzyme FASN as an important regulator of mutp53 accumulation and GOF. FASN interacts with mutp53 to enhance mutp53 palmitoylation, which inhibits mutp53 ubiquitination to promote mutp53 accumulation and GOF. Blocking FASN genetically or by small-molecule inhibitors suppresses mutp53 palmitoylation to inhibit mutp53 accumulation, which in turn inhibits the growth of mutp53 tumors in orthotopic and subcutaneous xenograft tumor models and transgenic mice, as well as the growth of human tumor organoids carrying mutp53. Our results reveal that mutp53 palmitoylation is an important mechanism underlying mutp53 accumulation and GOF, and targeting FASN is a potential therapeutic strategy for cancers carrying mutp53.
Collapse
Affiliation(s)
- Juan Liu
- Department of Radiation Oncology, Rutgers Cancer Institute, Rutgers-State University of New Jersey, New Brunswick, NJ, USA
| | - Yiyun Shen
- Department of Radiation Oncology, Rutgers Cancer Institute, Rutgers-State University of New Jersey, New Brunswick, NJ, USA
| | - Jie Liu
- Department of Radiation Oncology, Rutgers Cancer Institute, Rutgers-State University of New Jersey, New Brunswick, NJ, USA
| | - Dandan Xu
- Department of Radiation Oncology, Rutgers Cancer Institute, Rutgers-State University of New Jersey, New Brunswick, NJ, USA
| | - Chun-Yuan Chang
- Department of Radiation Oncology, Rutgers Cancer Institute, Rutgers-State University of New Jersey, New Brunswick, NJ, USA
| | - Jianming Wang
- Department of Radiation Oncology, Rutgers Cancer Institute, Rutgers-State University of New Jersey, New Brunswick, NJ, USA
| | - Jason Zhou
- Department of Radiation Oncology, Rutgers Cancer Institute, Rutgers-State University of New Jersey, New Brunswick, NJ, USA
| | - Bruce G Haffty
- Department of Radiation Oncology, Rutgers Cancer Institute, Rutgers-State University of New Jersey, New Brunswick, NJ, USA
| | - Lanjing Zhang
- Department of Pathology, Princeton Medical Center, Princeton, NJ, USA
- Department of Cell Biology and Neuroscience, Rutgers-State University of New Jersey, Piscataway, NJ, USA
| | - Jill Bargonetti
- Department of Biological Sciences, Hunter College, City University of New York, New York, NY, USA
| | - Subhajyoti De
- Center for Systems and Computational Biology, Rutgers Cancer Institute, Rutgers-State University of New Jersey, New Brunswick, NJ, USA
| | - Wenwei Hu
- Department of Radiation Oncology, Rutgers Cancer Institute, Rutgers-State University of New Jersey, New Brunswick, NJ, USA.
| | - Zhaohui Feng
- Department of Radiation Oncology, Rutgers Cancer Institute, Rutgers-State University of New Jersey, New Brunswick, NJ, USA.
| |
Collapse
|
5
|
Sardari M, Ghanati F, Mobasheri H, Hajnorouzi A. Sound waves alter the viability of tobacco cells via changes in cytosolic calcium, membrane integrity, and cell wall composition. PLoS One 2024; 19:e0299055. [PMID: 38466667 PMCID: PMC10927088 DOI: 10.1371/journal.pone.0299055] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2023] [Accepted: 02/04/2024] [Indexed: 03/13/2024] Open
Abstract
The effect of sound waves (SWs) on plant cells can be considered as important as other mechanical stimuli like touch, wind, rain, and gravity, causing certain responses associated with the downstream signaling pathways on the whole plant. The objective of the present study was to elucidate the response of suspension-cultured tobacco cells (Nicotiana tabacum L. cv Burley 21) to SW at different intensities. The sinusoidal SW (1,000 Hz) was produced through a signal generator, amplified, and beamed to the one layer floating tobacco cells inside a soundproof chamber at intensities of 60, 75, and 90 dB at the plate level for 15, 30, 45, and 60 min. Calibration of the applied SW intensities, accuracy, and uniformity of SW was performed by a sound level meter, and the cells were treated. The effect of SW on tobacco cells was monitored by quantitation of cytosolic calcium, redox status, membrane integrity, wall components, and the activity of wall modifying enzymes. Cytosolic calcium ions increased as a function of sound intensity with a maximum level of 90 dB. Exposure to 90 dB was also accompanied by a significant increase of H2O2 and membrane lipid peroxidation rate but the reduction of total antioxidant and radical scavenging capacities. The increase of wall rigidity in these cells was attributed to an increase in wall-bound phenolic acids and lignin and the activities of phenylalanine ammonia-lyase and covalently bound peroxidase. In comparison, in 60- and 75 dB, radical scavenging capacity increased, and the activity of wall stiffening enzymes reduced, but cell viability showed no changes. The outcome of the current study reveals that the impact of SW on plant cells is started by an increase in cytosolic calcium. However, upon calcium signaling, downstream events, including alteration of H2O2 and cell redox status and the activities of wall modifying enzymes, determined the extent of SW effects on tobacco cells.
Collapse
Affiliation(s)
- Mahsa Sardari
- Department of Plant Biology, Faculty of Biological Science, Tarbiat Modares University, Tehran, Iran
| | - Faezeh Ghanati
- Department of Plant Biology, Faculty of Biological Science, Tarbiat Modares University, Tehran, Iran
| | - Hamid Mobasheri
- Laboratory of Membrane Biophysics and Macromolecules, Institute of Biochemistry and Biophysics, University of Tehran, Tehran, Iran
| | - Abazar Hajnorouzi
- Department of Physics, Faculty of Basic Sciences, Shahed University, Tehran, Iran
| |
Collapse
|