1
|
Zhu Y, Li L. Wood of trees: Cellular structure, molecular formation, and genetic engineering. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2024; 66:443-467. [PMID: 38032010 DOI: 10.1111/jipb.13589] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2023] [Accepted: 11/28/2023] [Indexed: 12/01/2023]
Abstract
Wood is an invaluable asset to human society due to its renewable nature, making it suitable for both sustainable energy production and material manufacturing. Additionally, wood derived from forest trees plays a crucial role in sequestering a significant portion of the carbon dioxide fixed during photosynthesis by terrestrial plants. Nevertheless, with the expansion of the global population and ongoing industrialization, forest coverage has been substantially decreased, resulting in significant challenges for wood production and supply. Wood production practices have changed away from natural forests toward plantation forests. Thus, understanding the underlying genetic mechanisms of wood formation is the foundation for developing high-quality, fast-growing plantation trees. Breeding ideal forest trees for wood production using genetic technologies has attracted the interest of many. Tremendous studies have been carried out in recent years on the molecular, genetic, and cell-biological mechanisms of wood formation, and considerable progress and findings have been achieved. These studies and findings indicate enormous possibilities and prospects for tree improvement. This review will outline and assess the cellular and molecular mechanisms of wood formation, as well as studies on genetically improving forest trees, and address future development prospects.
Collapse
Affiliation(s)
- Yingying Zhu
- State Key Laboratory of Herbage Improvement and Grassland Agro-ecosystems and College of Ecology, Lanzhou University, Lanzhou, 730000, China
| | - Laigeng Li
- National Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China
| |
Collapse
|
2
|
Lemaire C, Quilichini Y, Brunel-Michac N, Santini J, Berti L, Cartailler J, Conchon P, Badel É, Herbette S. Plasticity of the xylem vulnerability to embolism in Populus tremula x alba relies on pit quantity properties rather than on pit structure. TREE PHYSIOLOGY 2021; 41:1384-1399. [PMID: 33554260 DOI: 10.1093/treephys/tpab018] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/05/2020] [Accepted: 01/22/2021] [Indexed: 06/12/2023]
Abstract
Knowledge on variations of drought resistance traits are needed to predict the potential of trees to acclimate to coming severe drought events. Xylem vulnerability to embolism is a key parameter related to such droughts, and its phenotypic variability relies mainly on environmental plasticity. We investigated the structural determinants controlling the plasticity of vulnerability to embolism, focusing on the key elements involved in the air bubble entry in vessels, especially the intervessel pits. Poplar saplings (Populus tremula x alba (Aiton) Sm., 1804) grown in contrasted water availability or light exposure exhibited differences in the vulnerability to embolism (P50) in a range of 0.76 MPa. We then characterized the structural changes in features related to pit quantity and pit structure, from the pit ultrastructure to the organization of xylem vessels, using different microscopy techniques (transmission electron microscopy, scanning electron microscopy, light microscopy). A multispectral combination of X-ray microtomography and light microscopy analysis allowed measuring the vulnerability of each single vessel and testing some of the relationships between structural traits and vulnerability to embolism inside the xylem. The pit ultrastructure did not change, whereas the vessel dimensions increased with the vulnerability to embolism and the grouping index and fraction of intervessel cell wall both decreased with the vulnerability to embolism. These findings hold when comparing between trees or between the vessels inside the xylem of an individual tree. These results evidenced that plasticity of vulnerability to embolism in hybrid poplar occurs through changes in the pit quantity properties such as pit area and vessel grouping rather than changes on the pit structure.
Collapse
Affiliation(s)
- Cédric Lemaire
- Université Clermont Auvergne, INRAE, PIAF, F-63000 Clermont-Ferrand, France
| | - Yann Quilichini
- CNRS-Università di Corsica, UMR 6134 SPE, 20250 Corti, France
| | | | - Jérémie Santini
- CNRS-Università di Corsica, UMR 6134 SPE, 20250 Corti, France
| | - Liliane Berti
- CNRS-Università di Corsica, UMR 6134 SPE, 20250 Corti, France
| | - Julien Cartailler
- Université Clermont Auvergne, INRAE, PIAF, F-63000 Clermont-Ferrand, France
| | - Pierre Conchon
- Université Clermont Auvergne, INRAE, PIAF, F-63000 Clermont-Ferrand, France
| | - Éric Badel
- Université Clermont Auvergne, INRAE, PIAF, F-63000 Clermont-Ferrand, France
| | - Stéphane Herbette
- Université Clermont Auvergne, INRAE, PIAF, F-63000 Clermont-Ferrand, France
| |
Collapse
|
3
|
Transcriptomic Analysis of Seasonal Gene Expression and Regulation during Xylem Development in “Shanxin” Hybrid Poplar (Populus davidiana × Populus bolleana). FORESTS 2021. [DOI: 10.3390/f12040451] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
Xylem development is a key process for wood formation in woody plants. To study the molecular regulatory mechanisms related to xylem development in hybrid poplar P. davidiana × P. bolleana, transcriptome analyses were conducted on developing xylem at six different growth stages within a single growing season. Xylem development and differentially expressed genes in the six time points were selected for a regulatory analysis. Xylem development was observed in stem sections at different growth stages, which showed that xylem development extended from the middle of April to early August and included cell expansion and secondary cell wall biosynthesis. An RNA-seq analysis of six samples with three replicates was performed. After transcriptome assembly and annotation, the differentially expressed genes (DEGs) were identified, and a Gene Ontology (GO) enrichment analysis, Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis and expression analysis of the DEGs were performed on each sample. On average, we obtained >20 million clean reads per sample, which were assembled into 84,733 nonredundant transcripts, of which there were 17,603 unigenes with lengths >1 kb. There were 14,890 genes that were differentially expressed among the six stages. The upregulated DEGs were enriched in GO terms related to cell wall biosynthesis between S1 vs. S2 or S3 vs. S4 and, in GO terms, related to phytohormones in the S1 vs. S2 or S4 vs. S5 comparisons. The downregulated DEGs were enriched in GO terms related to cell wall biosynthesis between S4 vs. S5 or S5 vs. S6 and, in GO terms, related to hormones between S1 vs. S2 or S2 vs. S3. The KEGG pathways in the DEGs related to “phenylpropanoid biosynthesis”, “plant hormone signal transduction” and “starch and sucrose metabolism” were significantly enriched among the different stages. The DEGs related to cell expansion, polysaccharide metabolism and synthesis, lignin synthesis, transcription factors and hormones were identified. The identification of genes involved in the regulation of xylem development will increase our understanding of the molecular regulation of wood formation in trees and, also, offers potential targets for genetic manipulation to improve the properties of wood.
Collapse
|
4
|
Torres-Ruiz JM. Virtual issue on Plant hydraulics: update on the recent discoveries. PHYSIOLOGIA PLANTARUM 2020; 168:758-761. [PMID: 32237154 DOI: 10.1111/ppl.13081] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2020] [Accepted: 02/27/2020] [Indexed: 05/07/2023]
Affiliation(s)
- José M Torres-Ruiz
- Université Clermont-Auvergne, INRAE, PIAF, 63000, Clermont-Ferrand, France
| |
Collapse
|
5
|
Li S, Wang J, Yin Y, Li X, Deng L, Jiang X, Chen Z, Li Y. Investigating Effects of Bordered Pit Membrane Morphology and Properties on Plant Xylem Hydraulic Functions-A Case Study from 3D Reconstruction and Microflow Modelling of Pit Membranes in Angiosperm Xylem. PLANTS (BASEL, SWITZERLAND) 2020; 9:E231. [PMID: 32054100 PMCID: PMC7076482 DOI: 10.3390/plants9020231] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/12/2019] [Revised: 01/18/2020] [Accepted: 02/08/2020] [Indexed: 01/12/2023]
Abstract
Pit membranes in between neighboring conduits of xylem play a crucial role in plant water transport. In this review, the morphological characteristics, chemical composition and mechanical properties of bordered pit membranes were summarized and linked with their functional roles in xylem hydraulics. The trade-off between xylem hydraulic efficiency and safety was closely related with morphology and properties of pit membranes, and xylem embolism resistance was also determined by the pit membrane morphology and properties. Besides, to further investigate the effects of bordered pit membranes morphology and properties on plant xylem hydraulic functions, here we modelled three-dimensional structure of bordered pit membranes by applying a deposition technique. Based on reconstructed 3D pit membrane structures, a virtual fibril network was generated to model the microflow pattern across inter-vessel pit membranes. Moreover, the mechanical behavior of intervessel pit membranes was estimated from a single microfibril's mechanical property. Pit membranes morphology varied among different angiosperm and gymnosperm species. Our modelling work suggested that larger pores of pit membranes do not necessarily contribute to major flow rate across pit membranes; instead, the obstructed degree of flow pathway across the pit membranes plays a more important role. Our work provides useful information for studying the mechanism of microfluid flow transport across pit membranes and also sheds light on investigating the response of pit membranes both at normal and stressed conditions, thus improving our understanding on functional roles of pit membranes in xylem hydraulic function. Further work could be done to study the morphological and mechanical response of bordered pit membranes under different dehydrated conditions, as well as the related microflow behavior, based on our constructed model.
Collapse
Affiliation(s)
- Shan Li
- Department of Wood Anatomy and Utilization, Research Institute of Wood Industry, Chinese Academy of Forestry, Beijing 100091, China; (S.L.); (J.W.); (Y.Y.); (L.D.); (X.J.)
- Wood Collections (WOODPEDIA), Chinese Academy of Forestry, Beijing 100091, China
| | - Jie Wang
- Department of Wood Anatomy and Utilization, Research Institute of Wood Industry, Chinese Academy of Forestry, Beijing 100091, China; (S.L.); (J.W.); (Y.Y.); (L.D.); (X.J.)
- Wood Collections (WOODPEDIA), Chinese Academy of Forestry, Beijing 100091, China
| | - Yafang Yin
- Department of Wood Anatomy and Utilization, Research Institute of Wood Industry, Chinese Academy of Forestry, Beijing 100091, China; (S.L.); (J.W.); (Y.Y.); (L.D.); (X.J.)
- Wood Collections (WOODPEDIA), Chinese Academy of Forestry, Beijing 100091, China
| | - Xin Li
- College of Forestry, Beijing Forestry University, Beijing 100083, China;
| | - Liping Deng
- Department of Wood Anatomy and Utilization, Research Institute of Wood Industry, Chinese Academy of Forestry, Beijing 100091, China; (S.L.); (J.W.); (Y.Y.); (L.D.); (X.J.)
- International Center for Bamboo and Rattan, Beijing 100102, China
| | - Xiaomei Jiang
- Department of Wood Anatomy and Utilization, Research Institute of Wood Industry, Chinese Academy of Forestry, Beijing 100091, China; (S.L.); (J.W.); (Y.Y.); (L.D.); (X.J.)
- Wood Collections (WOODPEDIA), Chinese Academy of Forestry, Beijing 100091, China
| | - Zhicheng Chen
- Institute of New Forestry Technology, Chinese Academy of Forestry, Beijing 100083, China;
| | - Yujun Li
- School of Mechanical Engineering, Northwestern Polytechnical University, Xi’an 710072, China
| |
Collapse
|