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Kakkar M, Patil JM, Trivedi V, Yadav A, Saha RK, Rao S, Vazhayil V, Pandya HJ, Mahadevan A, Shekhar H, Mercado-Shekhar KP. Hermite-scan imaging for differentiating glioblastoma from normal brain: Simulations and ex vivo studies for applications in intra-operative tumor identificationa). THE JOURNAL OF THE ACOUSTICAL SOCIETY OF AMERICA 2023; 154:3833-3841. [PMID: 38109407 DOI: 10.1121/10.0023952] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/09/2023] [Accepted: 11/28/2023] [Indexed: 12/20/2023]
Abstract
Hermite-scan (H-scan) imaging is a tissue characterization technique based on the analysis of raw ultrasound radio frequency (RF) echoes. It matches the RF echoes to Gaussian-weighted Hermite polynomials of various orders to extract information related to scatterer diameter. It provides a color map of large and small scatterers in the red and blue H-scan image channels, respectively. H-scan has been previously reported for characterizing breast, pancreatic, and thyroid tumors. The present work evaluated H-scan imaging to differentiate glioblastoma tumors from normal brain tissue ex vivo. First, we conducted 2-D numerical simulations using the k-wave toolbox to assess the performance of parameters derived from H-scan images of acoustic scatterers (15-150 μm diameters) and concentrations (0.2%-1% w/v). We found that the parameter intensity-weighted percentage of red (IWPR) was sensitive to changes in scatterer diameters independent of concentration. Next, we assessed the feasibility of using the IWPR parameter for differentiating glioblastoma and normal brain tissues (n = 11 samples per group). The IWPR parameter estimates for normal tissue (44.1% ± 1.4%) were significantly different (p < 0.0001) from those for glioblastoma (36.2% ± 0.65%). These findings advance the development of H-scan imaging for potential use in differentiating glioblastoma tumors from normal brain tissue during resection surgery.
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Affiliation(s)
- Manik Kakkar
- Department of Electrical Engineering, Indian Institute of Technology Gandhinagar, Gandhinagar, Gujarat 382355, India
| | - Jagruti M Patil
- Department of Biological Sciences and Engineering, Indian Institute of Technology Gandhinagar, Gandhinagar, Gujarat 382355, India
| | - Vishwas Trivedi
- Department of Electrical Engineering, Indian Institute of Technology Gandhinagar, Gandhinagar, Gujarat 382355, India
| | - Anushka Yadav
- Department of Electrical Engineering, Indian Institute of Technology Gandhinagar, Gandhinagar, Gujarat 382355, India
| | - Ratan K Saha
- Department of Applied Sciences, Indian Institute of Information Technology Allahabad, Prayagraj, Uttar Pradesh 211015, India
| | - Shilpa Rao
- Department of Neuropathology, National Institute of Mental Health and Neurosciences, Bangalore, Karnataka 560029, India
| | - Vikas Vazhayil
- Department of Neurosurgery, National Institute of Mental Health and Neurosciences, Bangalore, Karnataka 560029, India
| | - Hardik J Pandya
- Department of Electronic Systems Engineering, Indian Institute of Science, Bangalore, Karnataka 560012, India
| | - Anita Mahadevan
- Department of Neuropathology, National Institute of Mental Health and Neurosciences, Bangalore, Karnataka 560029, India
| | - Himanshu Shekhar
- Department of Electrical Engineering, Indian Institute of Technology Gandhinagar, Gandhinagar, Gujarat 382355, India
| | - Karla P Mercado-Shekhar
- Department of Biological Sciences and Engineering, Indian Institute of Technology Gandhinagar, Gandhinagar, Gujarat 382355, India
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Li S, Zhou Z, Wu S, Wu W. Ultrasound Homodyned-K Contrast-Weighted Summation Parametric Imaging Based on H-scan for Detecting Microwave Ablation Zones. ULTRASONIC IMAGING 2023; 45:119-135. [PMID: 36995065 DOI: 10.1177/01617346231162928] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/19/2023]
Abstract
The homodyned-K (HK) distribution is a generalized model of envelope statistics whose parameters α (the clustering parameter) and k (the coherent-to-diffuse signal ratio) can be used to monitor the thermal lesions. In this study, we proposed an ultrasound HK contrast-weighted summation (CWS) parametric imaging algorithm based on the H-scan technique and investigated the optimal window side length (WSL) of the HK parameters estimated by the XU estimator (an estimation method based on the first moment of the intensity and two log-moments, which was used in the proposed algorithm) through phantom simulations. H-scan diversified ultrasonic backscattered signals into low- and high-frequency passbands. After envelope detection and HK parameter estimation for each frequency band, the α and k parametric maps were obtained, respectively. According to the contrast between the target region and background, the (α or k) parametric maps of the dual-frequency band were weighted and summed, and then the CWS images were yielded by pseudo-color imaging. The proposed HK CWS parametric imaging algorithm was used to detect the microwave ablation coagulation zones of porcine liver ex vivo under different powers and treatment durations. The performance of the proposed algorithm was compared with that of the conventional HK parametric imaging and frequency diversity and compounding Nakagami imaging algorithms. For two-dimensional HK parametric imaging, it was found that a WSL equal to 4 pulse lengths of the transducer was sufficient for estimating the α and k parameters in terms of both parameter estimation stability and parametric imaging resolution. The HK CWS parametric imaging provided an improved contrast-to-noise ratio over conventional HK parametric imaging, and the HK αcws parametric imaging achieved the best accuracy and Dice score of coagulation zone detection.
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Affiliation(s)
- Sinan Li
- Department of Biomedical Engineering, Faculty of Environment and Life, Beijing University of Technology, Beijing, China
| | - Zhuhuang Zhou
- Department of Biomedical Engineering, Faculty of Environment and Life, Beijing University of Technology, Beijing, China
| | - Shuicai Wu
- Department of Biomedical Engineering, Faculty of Environment and Life, Beijing University of Technology, Beijing, China
| | - Weiwei Wu
- College of Biomedical Engineering, Capital Medical University, Beijing, China
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Khairalseed M, Hoyt K. High-Resolution Ultrasound Characterization of Local Scattering in Cancer Tissue. ULTRASOUND IN MEDICINE & BIOLOGY 2023; 49:951-960. [PMID: 36681609 PMCID: PMC9974749 DOI: 10.1016/j.ultrasmedbio.2022.11.017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2022] [Revised: 11/21/2022] [Accepted: 11/23/2022] [Indexed: 06/17/2023]
Abstract
Ultrasound (US) has afforded an approach to tissue characterization for more than a decade. The challenge is to reveal hidden patterns in the US data that describe tissue function and pathology that cannot be seen in conventional US images. Our group has developed a high-resolution analysis technique for tissue characterization termed H-scan US, an imaging method used to interpret the relative size of acoustic scatterers. In the present study, the objective was to compare local H-scan US image intensity with registered histologic measurements made directly at the cellular level. Human breast cancer cells (MDA-MB 231, American Type Culture Collection, Manassas, VA, USA) were orthotopically implanted into female mice (N = 5). Tumors were allowed to grow for approximately 4 wk before the study started. In vivo imaging of tumor tissue was performed using a US system (Vantage 256, Verasonics Inc., Kirkland, WA, USA) equipped with a broadband capacitive micromachined ultrasonic linear array transducer (Kolo Medical, San Jose, CA, USA). A 15-MHz center frequency was used for plane wave imaging with five angles for spatial compounding. H-scan US image reconstruction involved use of parallel convolution filters to measure the relative strength of backscattered US signals. Color codes were applied to filter outputs to form the final H-scan US image display. For histologic processing, US imaging cross-sections were carefully marked on the tumor surface, and tumors were excised and sliced along the same plane. By use of optical microscopy, whole tumor tissue sections were scanned and digitized after nuclear staining. US images were interpolated to have the same number of pixels as the histology images and then spatially aligned. Each nucleus from the histologic sections was automatically segmented using custom MATLAB software (The MathWorks Inc., Natick, MA, USA). Nuclear size and spacing from the histology images were then compared with local H-scan US image features. Overall, local H-scan US image intensity exhibited a significant correlation with both cancer cell nuclear size (R2 > 0.27, p < 0.001) and the inverse relationship with nuclear spacing (R2 > 0.17, p < 0.001).
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Affiliation(s)
- Mawia Khairalseed
- Department of Bioengineering, University of Texas at Dallas, Richardson, Texas, USA
| | - Kenneth Hoyt
- Department of Bioengineering, University of Texas at Dallas, Richardson, Texas, USA.
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Baek J, Basavarajappa L, Hoyt K, Parker KJ. Disease-Specific Imaging Utilizing Support Vector Machine Classification of H-Scan Parameters: Assessment of Steatosis in a Rat Model. IEEE TRANSACTIONS ON ULTRASONICS, FERROELECTRICS, AND FREQUENCY CONTROL 2022; 69:720-731. [PMID: 34936555 PMCID: PMC8908945 DOI: 10.1109/tuffc.2021.3137644] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
In medical imaging, quantitative measurements have shown promise in identifying diseases by classifying normal versus pathological parameters from tissues. The support vector machine (SVM) has shown promise as a supervised classification algorithm and has been widely used. However, the classification results typically identify a category of abnormal tissues but do not necessarily differentiate progressive stages of a disease. Moreover, the classification result is typically provided independently as a supplement to medical images, which contributes to an overload of information sources in the clinic. Hence, we propose a new imaging method utilizing the SVM to integrate classification results into medical images. This framework is called disease-specific imaging (DSI) that produces a color overlaid highlight on B-mode ultrasound images indicating the type, location, and severity of pathology from different conditions. In this article, the SVM training was performed to construct hyperplanes that can differentiate normal, fibrosis, steatosis, and pancreatic ductal adenocarcinoma (PDAC) metastases in livers based on ultrasound echoes. Also, cluster centroids for specific diseases define unique disease axes, and the inner product between measured features and any disease axis selected by the SVM quantifies the disease progression. The features were measured from 2794 ultrasound frames using the H-scan analysis, attenuation estimation, and B-mode image analysis. The performance of our proposed DSI method was evaluated for a preclinical model of steatosis ( n = 400 frames). The contribution of each feature was assessed, and the results were compared with ground truth from histology. Moreover, the images generated by our DSI were compared with earlier imaging methods of B-mode, H-scan, and histology. The comparisons demonstrate that DSI images yield higher sensitivity to monitor progressive steatosis than B-mode and H-scan and provide a comparable performance with the histology. For the parameter comparison, DSI and H-scan resulted in similar correlation with histology ( rs = 0.83 ) but higher than attenuation ( rs = 0.73 ) and B-mode ( rs = 0.47 ). Therefore, we conclude that DSI utilizing the SVM applied to steatosis can visually represent the classification results with color highlighting, which can simplify the interpretation of classification compared to the traditional SVM result. We expect that the proposed DSI can be used for any medical imaging modality that can estimate multiple quantitative parameters at high resolution.
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Tai H, Khairalseed M, Hoyt K. 3-D H-Scan Ultrasound Imaging and Use of a Convolutional Neural Network for Scatterer Size Estimation. ULTRASOUND IN MEDICINE & BIOLOGY 2020; 46:2810-2818. [PMID: 32653207 PMCID: PMC7484237 DOI: 10.1016/j.ultrasmedbio.2020.06.001] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2019] [Revised: 05/25/2020] [Accepted: 06/01/2020] [Indexed: 05/29/2023]
Abstract
H-Scan ultrasound (US) is a new imaging technology that estimates the relative size of acoustic scattering objects and structures. The purpose of this study was to introduce a three-dimensional (3-D) H-scan US imaging approach for scatterer size estimation in volume space. Using a programmable research scanner (Vantage 256, Verasonics Inc, Kirkland, WA, USA) equipped with a custom volumetric imaging transducer (4 DL7, Vermon, Tours, France), raw radiofrequency (RF) data was collected for offline processing to generate H-scan US volumes. A deep convolutional neural network (CNN) was modified and used to achieve voxel mapping from the input H-scan US image to underlying scatterer size. Preliminary studies were conducted using homogeneous gelatin-based tissue-mimicking phantom materials embedded with acoustic scatterers of varying size (15 to 250 μm) and concentrations (0.1 to 1%). Two additional phantoms were embedded with 63 or 125 µm-sized microspheres and used to test CNN estimation accuracy. In vitro results indicate that 3-D H-scan US imaging can visualize the spatial distribution of acoustic scatterers of varying size at different concentrations (R2 > 0.85, p < 0.03). The result of scatterer size estimation reveals that a CNN can achieve an average mapping accuracy of 93.3%. Overall, our preliminary in vitro findings reveal that 3-D H-scan US imaging allows the visualization of tissue scatterer patterns and incorporation of a CNN can be used to help estimate size of the acoustic scattering objects.
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Affiliation(s)
- Haowei Tai
- Department of Electrical and Computer Engineering, University of Texas at Dallas, Richardson, TX, USA
| | - Mawia Khairalseed
- Department of Bioengineering, University of Texas at Dallas, Richardson, TX, USA
| | - Kenneth Hoyt
- Department of Bioengineering, University of Texas at Dallas, Richardson, TX, USA; Department of Radiology, University of Texas Southwestern Medical Center, Dallas, TX, USA; Department of Electrical and Computer Engineering, University of Texas at Dallas, Richardson, TX, USA.
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Abstract
The H-scan approach ('H' denoting hue, or Hermite) is a recent matched filter methodology that aims to add information to the traditional ultrasound B-scan. The theory is based on the differences in the echoes produced by different classes of reflectors or scatterers. Matched filters can be created for different types of scatterers, whereby the maximum output indicates a match, and color schemes can be used to indicate the class of scatterer responsible for echoes, providing a visual interpretation of the results. However, within the theory of weak scattering from a variety of shapes, small changes in the size of the inhomogeneous objects will create shifts in the scattering transfer function. In this paper, we argue for a general power law transfer function as the canonical model for transfer functions from most normal soft vascularized tissues, at least over some bandpass spectrum illuminated by the incident pulse. In cases where scatterer size and distributions change, this produces a corresponding shift in center frequency, along with time and frequency domain characteristics of echoes, and these are captured by matched filters to distinguish and visualize in color the major characteristics of scattering types. With this general approach, the H-scan matched filters can be set to elicit more fine grain shifts in scattering types, commensurate with more subtle changes in tissue morphology. Compensation for frequency-dependent attenuation is helpful for avoiding beam softening effects with increasing depths. Examples from phantoms and normal and pathological tissues are provided to demonstrate that the H-scan analysis and displays are sensitive to scatterer size and morphology, and can be adapted to conventional imaging systems.
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Affiliation(s)
- Kevin J. Parker
- Department of Electrical & Computer Engineering, University of Rochester, Rochester, New York 14627, USA
| | - Jihye Baek
- Department of Electrical & Computer Engineering, University of Rochester, Rochester, New York 14627, USA
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Tai H, Khairalseed M, Hoyt K. Adaptive attenuation correction during H-scan ultrasound imaging using K-means clustering. ULTRASONICS 2020; 102:105987. [PMID: 31477244 PMCID: PMC7036031 DOI: 10.1016/j.ultras.2019.105987] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/25/2019] [Revised: 06/29/2019] [Accepted: 08/22/2019] [Indexed: 05/29/2023]
Abstract
H-scan ultrasound (US) imaging (where the 'H' stands for Hermite) is a novel non-invasive, low cost and real-time technology. Like traditional US, H-scan US suffers from frequency-dependent attenuation that must be corrected to have acceptable image quality for tissue characterization. The goal of this research was to develop a novel attenuation correction method based on adaptive K-means clustering. To properly isolate these signals, a lateral moving window approach applied to adaptively adjust GH filters based on the changing of RF vector spectrums. Then the signal isolated via the same filter will be combined together via overlap-add technology to keep the information loss minimum. Experimental data was collected using a Verasonics 256 US scanner equipped with a L11-4v linear array transducer. In vivo data indicates that H-scan US imaging after adaptive attenuation correction can optimally re-scale the GH kernels and match to the changing spectrum undergoing attenuation (i.e. high frequency shift). This approach produces H-scan US images with more uniform spatial intensity and outperforms global attenuation correction strategies. Overall, this approach will improve the ability of H-scan US imaging to estimate acoustic scatterer size and will improve its clinical use for tissue characterization when imaging complex tissues.
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Affiliation(s)
- Haowei Tai
- Department of Electrical and Computer Engineering, University of Texas at Dallas, Richardson, TX, USA; Department of Biomedical Engineering, University of Texas at Dallas, Richardson, TX, USA
| | - Mawia Khairalseed
- Department of Biomedical Engineering, University of Texas at Dallas, Richardson, TX, USA; Department of Biomedical Engineering, Sudan University of Science and Technology and African City of Technology, Khartoum, Sudan
| | - Kenneth Hoyt
- Department of Biomedical Engineering, University of Texas at Dallas, Richardson, TX, USA; Department of Radiology, University of Texas Southwestern Medical Center, Dallas, TX, USA.
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Classification of Benign and Malignant Breast Tumors Using H-Scan Ultrasound Imaging. Diagnostics (Basel) 2019; 9:diagnostics9040182. [PMID: 31717382 PMCID: PMC6963514 DOI: 10.3390/diagnostics9040182] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2019] [Revised: 10/29/2019] [Accepted: 11/07/2019] [Indexed: 12/28/2022] Open
Abstract
Breast cancer is one of the most common cancers among women worldwide. Ultrasound imaging has been widely used in the detection and diagnosis of breast tumors. However, due to factors such as limited spatial resolution and speckle noise, classification of benign and malignant breast tumors using conventional B-mode ultrasound still remains a challenging task. H-scan is a new ultrasound technique that images the relative size of acoustic scatterers. However, the feasibility of H-scan ultrasound imaging in the classification of benign and malignant breast tumors has not been investigated. In this paper, we proposed a new method based on H-scan ultrasound imaging to classify benign and malignant breast tumors. Backscattered ultrasound radiofrequency signals of 100 breast tumors were used (48 benign and 52 malignant cases). H-scan ultrasound images were constructed with the radiofrequency signals by matched filtering using Gaussian-weighted Hermite polynomials. Experimental results showed that benign breast tumors had more red components, while malignant breast tumors had more blue components in H-scan ultrasound images. There were significant differences between the RGB channels of H-scan ultrasound images of benign and malignant breast tumors. We conclude H-scan ultrasound imaging can be used as a new method for classifying benign and malignant breast tumors.
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Khairalseed M, Javed K, Jashkaran G, Kim JW, Parker KJ, Hoyt K. Monitoring Early Breast Cancer Response to Neoadjuvant Therapy Using H-Scan Ultrasound Imaging: Preliminary Preclinical Results. JOURNAL OF ULTRASOUND IN MEDICINE : OFFICIAL JOURNAL OF THE AMERICAN INSTITUTE OF ULTRASOUND IN MEDICINE 2019; 38:1259-1268. [PMID: 30280391 PMCID: PMC6445796 DOI: 10.1002/jum.14806] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/26/2018] [Accepted: 07/22/2018] [Indexed: 05/10/2023]
Abstract
OBJECTIVE H-scan imaging is a new ultrasound technique used to visualize the relative size of acoustic scatterers. The purpose of this study was to evaluate the use of H-scan ultrasound imaging for monitoring early tumor response to neoadjuvant treatment using a preclinical breast cancer animal model. METHODS Real-time H-scan ultrasound imaging was implemented on a programmable ultrasound scanner (Vantage 256; Verasonics Inc., Kirkland, WA) equipped with an L11-4v transducer. Bioluminescence and H-scan ultrasound was used to image luciferase-positive breast cancer-bearing mice at baseline and at 24, 48, and 168 hours after administration of a single dose of neoadjuvant (paclitaxel) or sham treatment. Animals were euthanized at 48 or 168 hours, and tumors underwent histologic processing to identify cancer cell proliferation and apoptosis. RESULTS Baseline H-scan ultrasound images of control and therapy group tumors were comparable, but the latter exhibited significant changes over the 7-day study (P < .05). At termination, there was a marked difference between the H-scan ultrasound images of control and treated tumors (P < .05). Specifically, H-scan ultrasound images of treated tumors were more blue in hue than images obtained from control tumors. There was a significant linear correlation between the predominance of the blue hue found in the H-scan ultrasound images and intratumoral apoptotic activity (R2 > 0.40, P < .04). CONCLUSION Preliminary preclinical results suggest that H-scan ultrasound imaging is a new and promising tissue characterization modality. H-scan ultrasound imaging may provide prognostic value when monitoring early tumor response to neoadjuvant treatment.
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Affiliation(s)
- Mawia Khairalseed
- Department of Bioengineering, University of Texas at Dallas, Richardson, Texas, USA
- Department of Biomedical Engineering, Sudan University of Science and Technology, Khartoum, Sudan
| | - Kulsoom Javed
- Department of Bioengineering, University of Texas at Dallas, Richardson, Texas, USA
| | - Gadhvi Jashkaran
- Department of Biological Sciences, University of Texas at Dallas, Richardson, Texas, USA
| | - Jung-Whan Kim
- Department of Biological Sciences, University of Texas at Dallas, Richardson, Texas, USA
| | - Kevin J Parker
- Department of Electrical and Computer Engineering, University of Rochester, Rochester, New York, USA
| | - Kenneth Hoyt
- Department of Bioengineering, University of Texas at Dallas, Richardson, Texas, USA
- Department of Radiology, University of Texas Southwestern Medical Center, Dallas, Texas, USA
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Vajihi Z, Rosado-Mendez IM, Hall TJ, Rivaz H. Low Variance Estimation of Backscatter Quantitative Ultrasound Parameters Using Dynamic Programming. IEEE TRANSACTIONS ON ULTRASONICS, FERROELECTRICS, AND FREQUENCY CONTROL 2018; 65:2042-2053. [PMID: 30222558 PMCID: PMC6231960 DOI: 10.1109/tuffc.2018.2869810] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
One of the main limitations of ultrasound imaging is that image quality and interpretation depend on the skill of the user and the experience of the clinician. Quantitative ultrasound (QUS) methods provide objective, system-independent estimates of tissue properties, such as acoustic attenuation and backscattering properties of tissue, which are valuable as objective tools for both diagnosis and intervention. Accurate and precise estimation of these properties requires correct compensation for intervening tissue attenuation. Prior attempts to estimate intervening-tissue attenuation based on minimizing cost functions that compared backscattered echo data to models have resulted in limited precision and accuracy. To overcome these limitations, in this paper, we incorporate the prior information of piecewise continuity of QUS parameters as a regularization term into our cost function. We further propose to calculate this cost function using dynamic programming (DP), a computationally efficient optimization algorithm that finds the global optimum. Our results on tissue-mimicking phantoms show that DP substantially outperforms a published least squares method in terms of both estimation bias and variance.
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