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Popper AN, Amorim C, Fine ML, Higgs DM, Mensinger AF, Sisneros JA. Introduction to the special issue on fish bioacoustics: Hearing and sound communicationa). THE JOURNAL OF THE ACOUSTICAL SOCIETY OF AMERICA 2024; 155:2385-2391. [PMID: 38563625 DOI: 10.1121/10.0025553] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/18/2024] [Accepted: 03/25/2024] [Indexed: 04/04/2024]
Abstract
Fish bioacoustics, or the study of fish hearing, sound production, and acoustic communication, was discussed as early as Aristotle. However, questions about how fishes hear were not really addressed until the early 20th century. Work on fish bioacoustics grew after World War II and considerably in the 21st century since investigators, regulators, and others realized that anthropogenic (human-generated sounds), which had primarily been of interest to workers on marine mammals, was likely to have a major impact on fishes (as well as on aquatic invertebrates). Moreover, passive acoustic monitoring of fishes, recording fish sounds in the field, has blossomed as a noninvasive technique for sampling abundance, distribution, and reproduction of various sonic fishes. The field is vital since fishes and aquatic invertebrates make up a major portion of the protein eaten by a signification portion of humans. To help better understand fish bioacoustics and engage it with issues of anthropogenic sound, this special issue of The Journal of the Acoustical Society of America (JASA) brings together papers that explore the breadth of the topic, from a historical perspective to the latest findings on the impact of anthropogenic sounds on fishes.
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Affiliation(s)
- Arthur N Popper
- Department of Biology, University of Maryland, College Park, Maryland 20742, USA
- Environmental BioAcoustics LLC, Silver Spring, Maryland 20906, USA
| | - Clara Amorim
- Departamento de Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal
- MARE-Marine and Environmental Sciences Centre, Universidade de Lisboa, Lisboa, Portugal
| | - Michael L Fine
- Department of Biology, Virginia Commonwealth University, Richmond, Virginia 23284, USA
| | - Dennis M Higgs
- Department of Integrative Biology, University of Windsor, Windsor, Ontario, N9B 3P4, Canada
| | - Allen F Mensinger
- Biology Department, University of Minnesota Duluth, Duluth, Minnesota 55812, USA
| | - Joseph A Sisneros
- Department of Psychology, University of Washington, Seattle, Washington 98195, USA
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Horvatić S, Parmentier E, Malavasi S, Amorim MPC, Fonseca PJ, Zanella D. Endemic fish calling: Acoustics and reproductive behaviour of the Neretva dwarf goby Orsinigobius croaticus. Ecol Evol 2023; 13:e10673. [PMID: 38020677 PMCID: PMC10654559 DOI: 10.1002/ece3.10673] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2023] [Revised: 09/27/2023] [Accepted: 10/16/2023] [Indexed: 12/01/2023] Open
Abstract
The Neretva dwarf goby Orsinigobius croaticus (Gobiiformes, Gobionellidae) is an endemic fish native to the freshwaters of the Adriatic Basin in Croatia and Bosnia and Herzegovina, a Mediterranean Biodiversity Hotspot. Due to its limited distribution range, specific karst habitat and endangered status, laboratory studies on reproductive biology are scarce but crucial. Herein, we investigated the sound production and acoustic behaviour of the endangered O. croaticus during reproductive intersexual laboratory encounters, utilising an interdisciplinary approach. We also performed dissections and micro-computed tomography (μCT) scanning of the pectoral girdle to explore its potential involvement in sound production. Finally, comparative acoustic analysis was conducted on sounds produced by previously recorded soniferous sand gobies to investigate whether acoustic features are species-specific. The endemic O. croaticus is a soniferous species. Males of this species emit pulsatile sounds composed of a variable number of short (~15 ms) consecutive pulses when interacting with females, usually during the pre-spawning phase in the nest, but also during courtship outside the nest. Pulsatile sounds were low-frequency and short pulse trains (~140 Hz, <1000 ms). Male visual behaviour rate was higher when co-occurring with sounds and females entered the male's nest significantly more frequently when sounds were present. Characteristic body movements accompanied male sound production, such as head thrust and fin spreading. Furthermore, μCT scans and dissections suggest that O. croaticus shares certain anatomical similarities of the pectoral girdle (i.e. osseous elements and arrangement of levator pectoralis muscles) to previously studied sand gobies that could be involved in sound production. Multivariate comparisons, using sounds produced by eight soniferous European sand gobies, effectively distinguished soniferous (and sympatric) species based on their acoustic properties. However, the discrimination success decreased when temperature-dependent features (sound duration and pulse repetition rate) were excluded from the analysis. Therefore, we suggest both spectral and temporal features are important for the acoustic differentiation of sand gobies.
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Affiliation(s)
- Sven Horvatić
- Department of Zoology, Faculty of ScienceUniversity of ZagrebZagrebCroatia
| | - Eric Parmentier
- Laboratory of Functional and Evolutionary Morphology, FOCUSUniversity of LiègeLiègeBelgium
| | - Stefano Malavasi
- Department of Environmental Sciences, Informatics and Statistics, Cà FoscariUniversity of VeniceVenezia MestreItaly
| | - Maria P. Clara Amorim
- Departamento de Biologia Animal and MARE – Marine and Environmental Sciences Centre/ARNET ‐ Aquatic Research Network, Faculdade de CiênciasUniversidade de LisboaLisbonPortugal
| | - Paulo J. Fonseca
- Departamento de Biologia Animal and cE3c ‐ Centre for Ecology, Evolution and Environmental Changes, Faculdade de CiênciasUniversidade de LisboaLisbonPortugal
| | - Davor Zanella
- Department of Zoology, Faculty of ScienceUniversity of ZagrebZagrebCroatia
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Wang J, He W, Huang H, Ou D, Wang L, Li J, Li W, Luo S. A Comprehensive Analysis of the Fowleria variegata (Valenciennes, 1832) Mitochondrial Genome and Its Phylogenetic Implications within the Family Apogonidae. Genes (Basel) 2023; 14:1612. [PMID: 37628663 PMCID: PMC10454648 DOI: 10.3390/genes14081612] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2023] [Revised: 08/10/2023] [Accepted: 08/10/2023] [Indexed: 08/27/2023] Open
Abstract
Controversies surrounding the phylogenetic relationships within the family Apogonidae have persisted due to the limited molecular data, obscuring the evolution of these diverse tropical marine fishes. This study presents the first complete mitochondrial genome of Fowleria variegata, a previously unrepresented genus, using high-throughput Illumina sequencing. Through a comparative mitogenomic analysis, F. variegate was shown to exhibit a typical genome architecture and composition, including 13 protein-coding, 22 tRNA and 2 rRNA genes and a control region, consistent with studies of other Apogonidae species. Nearly all protein-coding genes started with ATG, while stop codons TAA/TAG/T were observed, along with evidence of strong functional constraints imposed via purifying selection. Phylogenetic reconstruction based on maximum likelihood and Bayesian approaches provided robust evidence that F. variegata forms a basal lineage closely related to P. trimaculatus within Apogonidae, offering novel perspectives into the molecular evolution of this family. By generating new mitogenomic resources and evolutionary insights, this study makes important headway in elucidating the phylogenetic relationships and mitogenomic characteristics of Apogonidae fishes. The findings provide critical groundwork for future investigations into the drivers of diversification, speciation patterns, and adaptive radiation underlying the extensive ecological diversity and biological success of these marine fishes using phylogenomics and population genomics approaches.
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Affiliation(s)
- Jiaqiao Wang
- Fisheries College of Ji Mei University, Xiamen 361000, China
- Fujian Provincial Key Laboratory of Marine Fishery Resources and Eco-Environment, Xiamen 361000, China
| | - Weiyi He
- Third Institute of Oceanography, Ministry of Natural Resources, Xiamen 361005, China
| | - Hao Huang
- Third Institute of Oceanography, Ministry of Natural Resources, Xiamen 361005, China
| | - Danyun Ou
- Third Institute of Oceanography, Ministry of Natural Resources, Xiamen 361005, China
| | - Lei Wang
- Third Institute of Oceanography, Ministry of Natural Resources, Xiamen 361005, China
| | - Jun Li
- Fisheries College of Ji Mei University, Xiamen 361000, China
- Fujian Provincial Key Laboratory of Marine Fishery Resources and Eco-Environment, Xiamen 361000, China
| | - Weiwen Li
- Third Institute of Oceanography, Ministry of Natural Resources, Xiamen 361005, China
| | - Site Luo
- School of Life Sciences, Xiamen University, Xiamen 361102, China
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Banse M, Lecchini D, Bertucci F, Parmentier E. Reliable characterization of sound features in fishes begins in open-water environmentsa). THE JOURNAL OF THE ACOUSTICAL SOCIETY OF AMERICA 2023; 154:270-278. [PMID: 37450332 DOI: 10.1121/10.0020149] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/09/2023] [Accepted: 06/26/2023] [Indexed: 07/18/2023]
Abstract
Many fishes use sounds to communicate in a wide range of behavioral contexts. In monitoring studies, these sounds can be used to detect and identify species. However, being able to confidently link a sound to the correct emitting species requires precise acoustical characterization of the signals in controlled conditions. For practical reasons, this characterization is often performed in small sized aquaria, which, however, may cause sound distortion, and prevents an accurate description of sound characteristics that will ultimately impede sound-based species identification in open-water environments. This study compared the sounds features of five specimens of the silverspot squirrelfish Sargocentron caudimaculatum recorded at sea and in aquaria of different sizes and materials. Our results point out that it is preferable to record fish sounds in an open-water environment rather than in small aquaria because acoustical features are affected (sound duration and dominant frequency) when sounds are recorded in closed environments as a result of reverberation and resonance. If not possible, it is recommended that (1) sound recordings be made in plastic or plexiglass aquaria with respect to glass aquaria and (2) aquaria with the largest dimensions and volumes be chosen.
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Affiliation(s)
- Marine Banse
- Laboratoire de Morphologie Fonctionnelle et Evolutive, Université de Liège, 4000 Liège, Belgium
| | - David Lecchini
- Paris Sciences & Lettres University, Ecole Pratique des Hautes Etudes-Université de Perpignan Via Domitia, Centre National de Recherche Scientifique, Unité de Services et de Recherche, Centre de Recherches Insulaires et Observatoire de l'Environnement, Moorea, French Polynesia
| | - Frédéric Bertucci
- Unité Mixte de Recherche MARine Biodiversity, Exploitation and Conservation, University of Montpellier, Centre National de Recherche Scientifique, Institut Français de Recherche pour l'Exploitation de la Mer, Institut de Recherche pour le Développement, Sète, France
| | - Eric Parmentier
- Laboratoire de Morphologie Fonctionnelle et Evolutive, Université de Liège, 4000 Liège, Belgium
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