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For: Sun X, Dennis JJ. A novel insertion sequence derepresses efflux pump expression and preadapts Pseudomonas putida S12 for extreme solvent stress. J Bacteriol 2009;191:6773-7. [PMID: 19717594 DOI: 10.1128/JB.00832-09] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
Number Cited by Other Article(s)
1
Mutanda I, Sun J, Jiang J, Zhu D. Bacterial membrane transporter systems for aromatic compounds: Regulation, engineering, and biotechnological applications. Biotechnol Adv 2022;59:107952. [PMID: 35398204 DOI: 10.1016/j.biotechadv.2022.107952] [Citation(s) in RCA: 39] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2021] [Revised: 03/20/2022] [Accepted: 04/02/2022] [Indexed: 12/13/2022]
2
Kusumawardhani H, Hosseini R, Verschoor JA, de Winde JH. Comparative analysis reveals the modular functional structure of conjugative megaplasmid pTTS12 of Pseudomonas putida S12: A paradigm for transferable traits, plasmid stability, and inheritance? Front Microbiol 2022;13:1001472. [PMID: 36212887 PMCID: PMC9537497 DOI: 10.3389/fmicb.2022.1001472] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2022] [Accepted: 09/06/2022] [Indexed: 11/26/2022]  Open
3
Comparative Genomic Analyses of Flavobacterium psychrophilum Isolates Reveals New Putative Genetic Determinants of Virulence Traits. Microorganisms 2021;9:microorganisms9081658. [PMID: 34442736 PMCID: PMC8400371 DOI: 10.3390/microorganisms9081658] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2021] [Revised: 07/23/2021] [Accepted: 07/29/2021] [Indexed: 11/29/2022]  Open
4
How to outwit nature: Omics insight into butanol tolerance. Biotechnol Adv 2020;46:107658. [PMID: 33220435 DOI: 10.1016/j.biotechadv.2020.107658] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2020] [Revised: 11/10/2020] [Accepted: 11/13/2020] [Indexed: 12/16/2022]
5
Yao X, Tao F, Tang H, Hu H, Wang W, Xu P. Unique regulator SrpR mediates crosstalk between efflux pumps TtgABC and SrpABC in Pseudomonas putida B6-2 (DSM 28064). Mol Microbiol 2020;115:131-141. [PMID: 32945019 DOI: 10.1111/mmi.14605] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2019] [Revised: 09/03/2020] [Accepted: 09/07/2020] [Indexed: 11/28/2022]
6
Ding W, Zhang W, Alikunhi NM, Batang Z, Pei B, Wang R, Chen L, Al-Suwailem A, Qian PY. Metagenomic Analysis of Zinc Surface-Associated Marine Biofilms. MICROBIAL ECOLOGY 2019;77:406-416. [PMID: 30612183 DOI: 10.1007/s00248-018-01313-3] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/26/2018] [Accepted: 12/20/2018] [Indexed: 05/10/2023]
7
Yin S, Chen P, You B, Zhang Y, Jiang B, Huang G, Yang Z, Chen Y, Chen J, Yuan Z, Zhao Y, Li M, Hu F, Gong Y, Peng Y. Molecular Typing and Carbapenem Resistance Mechanisms of Pseudomonas aeruginosa Isolated From a Chinese Burn Center From 2011 to 2016. Front Microbiol 2018;9:1135. [PMID: 29896186 PMCID: PMC5987737 DOI: 10.3389/fmicb.2018.01135] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2017] [Accepted: 05/14/2018] [Indexed: 01/01/2023]  Open
8
Insertional inactivation of oprD in carbapenem-resistant Pseudomonas aeruginosa strains isolated from burn patients in Tehran, Iran. New Microbes New Infect 2017;21:75-80. [PMID: 29234497 PMCID: PMC5722278 DOI: 10.1016/j.nmni.2017.10.013] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2017] [Revised: 10/26/2017] [Accepted: 10/27/2017] [Indexed: 01/19/2023]  Open
9
Vandecraen J, Chandler M, Aertsen A, Van Houdt R. The impact of insertion sequences on bacterial genome plasticity and adaptability. Crit Rev Microbiol 2017;43:709-730. [PMID: 28407717 DOI: 10.1080/1040841x.2017.1303661] [Citation(s) in RCA: 250] [Impact Index Per Article: 31.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
10
Hosseini R, Kuepper J, Koebbing S, Blank LM, Wierckx N, de Winde JH. Regulation of solvent tolerance in Pseudomonas putida S12 mediated by mobile elements. Microb Biotechnol 2017;10:1558-1568. [PMID: 28401676 PMCID: PMC5658596 DOI: 10.1111/1751-7915.12495] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2016] [Revised: 11/30/2016] [Accepted: 12/01/2016] [Indexed: 11/28/2022]  Open
11
Fiedurek J, Trytek M, Szczodrak J. Strain improvement of industrially important microorganisms based on resistance to toxic metabolites and abiotic stress. J Basic Microbiol 2017;57:445-459. [DOI: 10.1002/jobm.201600710] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2016] [Accepted: 03/04/2017] [Indexed: 11/06/2022]
12
Volmer J, Schmid A, Bühler B. Guiding bioprocess design by microbial ecology. Curr Opin Microbiol 2015;25:25-32. [DOI: 10.1016/j.mib.2015.02.002] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2014] [Revised: 02/26/2015] [Accepted: 02/26/2015] [Indexed: 12/20/2022]
13
Ramos JL, Sol Cuenca M, Molina-Santiago C, Segura A, Duque E, Gómez-García MR, Udaondo Z, Roca A. Mechanisms of solvent resistance mediated by interplay of cellular factors inPseudomonas putida. FEMS Microbiol Rev 2015;39:555-66. [DOI: 10.1093/femsre/fuv006] [Citation(s) in RCA: 119] [Impact Index Per Article: 11.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 02/07/2015] [Indexed: 11/14/2022]  Open
14
Kuepper J, Ruijssenaars H, Blank L, de Winde J, Wierckx N. Complete genome sequence of solvent-tolerant Pseudomonas putida S12 including megaplasmid pTTS12. J Biotechnol 2015;200:17-8. [DOI: 10.1016/j.jbiotec.2015.02.027] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2015] [Accepted: 02/24/2015] [Indexed: 11/29/2022]
15
Engineering of Pseudomonas taiwanensis VLB120 for constitutive solvent tolerance and increased specific styrene epoxidation activity. Appl Environ Microbiol 2014;80:6539-48. [PMID: 25128338 DOI: 10.1128/aem.01940-14] [Citation(s) in RCA: 56] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]  Open
16
Fang ZL, Zhang LY, Huang YM, Qing Y, Cao KY, Tian GB, Huang X. OprD mutations and inactivation in imipenem-resistant Pseudomonas aeruginosa isolates from China. INFECTION GENETICS AND EVOLUTION 2014;21:124-8. [DOI: 10.1016/j.meegid.2013.10.027] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2013] [Revised: 10/28/2013] [Accepted: 10/30/2013] [Indexed: 11/25/2022]
17
Genome sequence of Pseudomonas putida S12, a potential platform strain for industrial production of valuable chemicals. J Bacteriol 2013;194:5985-6. [PMID: 23045497 DOI: 10.1128/jb.01482-12] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
18
Harrison ME, Dunlop MJ. Synthetic feedback loop model for increasing microbial biofuel production using a biosensor. Front Microbiol 2012;3:360. [PMID: 23112794 PMCID: PMC3481154 DOI: 10.3389/fmicb.2012.00360] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2012] [Accepted: 09/24/2012] [Indexed: 11/13/2022]  Open
19
Ryall B, Eydallin G, Ferenci T. Culture history and population heterogeneity as determinants of bacterial adaptation: the adaptomics of a single environmental transition. Microbiol Mol Biol Rev 2012;76:597-625. [PMID: 22933562 PMCID: PMC3429624 DOI: 10.1128/mmbr.05028-11] [Citation(s) in RCA: 107] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]  Open
20
Analysis of solvent tolerance inPseudomonas putidaDOT-T1E based on its genome sequence and a collection of mutants. FEBS Lett 2012;586:2932-8. [DOI: 10.1016/j.febslet.2012.07.031] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2012] [Revised: 07/09/2012] [Accepted: 07/09/2012] [Indexed: 11/19/2022]
21
Segura A, Molina L, Fillet S, Krell T, Bernal P, Muñoz-Rojas J, Ramos JL. Solvent tolerance in Gram-negative bacteria. Curr Opin Biotechnol 2012;23:415-21. [DOI: 10.1016/j.copbio.2011.11.015] [Citation(s) in RCA: 113] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2011] [Revised: 10/29/2011] [Accepted: 11/11/2011] [Indexed: 10/14/2022]
22
Taylor M, Ramond JB, Tuffin M, Burton S, Eley K, Cowan D. Mechanisms and Applications of Microbial Solvent Tolerance. MICROBIOLOGY MONOGRAPHS 2012. [DOI: 10.1007/978-3-642-21467-7_8] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/10/2023]
23
Tao F, Liu Y, Luo Q, Su F, Xu Y, Li F, Yu B, Ma C, Xu P. Novel organic solvent-responsive expression vectors for biocatalysis: application for development of an organic solvent-tolerant biodesulfurizing strain. BIORESOURCE TECHNOLOGY 2011;102:9380-9387. [PMID: 21875790 DOI: 10.1016/j.biortech.2011.08.015] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2011] [Revised: 08/02/2011] [Accepted: 08/02/2011] [Indexed: 05/31/2023]
24
Wang L, Wang FF, Qian W. Evolutionary rewiring and reprogramming of bacterial transcription regulation. J Genet Genomics 2011;38:279-88. [DOI: 10.1016/j.jgg.2011.06.001] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2011] [Revised: 06/07/2011] [Accepted: 06/07/2011] [Indexed: 11/26/2022]
25
An antirepressor, SrpR, is involved in transcriptional regulation of the SrpABC solvent tolerance efflux pump of Pseudomonas putida S12. J Bacteriol 2011;193:2717-25. [PMID: 21441510 DOI: 10.1128/jb.00149-11] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
26
Gaffé J, McKenzie C, Maharjan RP, Coursange E, Ferenci T, Schneider D. Insertion Sequence-Driven Evolution of Escherichia coli in Chemostats. J Mol Evol 2011;72:398-412. [DOI: 10.1007/s00239-011-9439-2] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2010] [Accepted: 03/01/2011] [Indexed: 11/30/2022]
27
Volkers RJM, Ballerstedt H, De Winde JH, Ruijssenaars HJ. Isolation and genetic characterization of an improved benzene-tolerant mutant of Pseudomonas putida S12. ENVIRONMENTAL MICROBIOLOGY REPORTS 2010;2:456-460. [PMID: 23766120 DOI: 10.1111/j.1758-2229.2010.00172.x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
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