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For: Jara M, Núñez C, Campoy S, Fernández de Henestrosa AR, Lovley DR, Barbé J. Geobacter sulfurreducens has two autoregulated lexA genes whose products do not bind the recA promoter: differing responses of lexA and recA to DNA damage. J Bacteriol 2003;185:2493-502. [PMID: 12670973 PMCID: PMC152628 DOI: 10.1128/jb.185.8.2493-2502.2003] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
Number Cited by Other Article(s)
1
Tabares M, Kashefi K, Reguera G. Adaptive responses of Trichlorobacter lovleyi to nitrite detoxification reveal overlooked contributions of Geobacterales to nitrate ammonification. THE ISME JOURNAL 2025;19:wraf054. [PMID: 40101204 PMCID: PMC11972089 DOI: 10.1093/ismejo/wraf054] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/01/2024] [Revised: 01/20/2025] [Accepted: 03/17/2025] [Indexed: 03/20/2025]
2
Sánchez-Osuna M, Cortés P, Lee M, Smith AT, Barbé J, Erill I. Non-canonical LexA proteins regulate the SOS response in the Bacteroidetes. Nucleic Acids Res 2021;49:11050-11066. [PMID: 34614190 PMCID: PMC8565304 DOI: 10.1093/nar/gkab773] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2021] [Revised: 08/18/2021] [Accepted: 10/04/2021] [Indexed: 02/07/2023]  Open
3
Timinskas K, Venclovas Č. New insights into the structures and interactions of bacterial Y-family DNA polymerases. Nucleic Acids Res 2019;47:4393-4405. [PMID: 30916324 PMCID: PMC6511836 DOI: 10.1093/nar/gkz198] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2018] [Revised: 03/09/2019] [Accepted: 03/19/2019] [Indexed: 11/15/2022]  Open
4
The electrifying physiology of Geobacter bacteria, 30 years on. Adv Microb Physiol 2019;74:1-96. [PMID: 31126529 DOI: 10.1016/bs.ampbs.2019.02.007] [Citation(s) in RCA: 77] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
5
Wang Y, Pan Y, Zhu T, Wang A, Lu Y, Lv L, Zhang K, Li Z. Enhanced performance and microbial community analysis of bioelectrochemical system integrated with bio-contact oxidation reactor for treatment of wastewater containing azo dye. THE SCIENCE OF THE TOTAL ENVIRONMENT 2018;634:616-627. [PMID: 29635204 DOI: 10.1016/j.scitotenv.2018.03.346] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/21/2018] [Revised: 03/27/2018] [Accepted: 03/28/2018] [Indexed: 06/08/2023]
6
Erill I, Campoy S, Kılıç S, Barbé J. The Verrucomicrobia LexA-Binding Motif: Insights into the Evolutionary Dynamics of the SOS Response. Front Mol Biosci 2016;3:33. [PMID: 27489856 PMCID: PMC4951493 DOI: 10.3389/fmolb.2016.00033] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2016] [Accepted: 07/04/2016] [Indexed: 12/20/2022]  Open
7
An SOS Regulon under Control of a Noncanonical LexA-Binding Motif in the Betaproteobacteria. J Bacteriol 2015;197:2622-30. [PMID: 25986903 DOI: 10.1128/jb.00035-15] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2015] [Accepted: 05/09/2015] [Indexed: 11/20/2022]  Open
8
Hare JM, Ferrell JC, Witkowski TA, Grice AN. Prophage induction and differential RecA and UmuDAb transcriptome regulation in the DNA damage responses of Acinetobacter baumannii and Acinetobacter baylyi. PLoS One 2014;9:e93861. [PMID: 24709747 PMCID: PMC3978071 DOI: 10.1371/journal.pone.0093861] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2013] [Accepted: 03/08/2014] [Indexed: 11/21/2022]  Open
9
Fonseca LS, da Silva JB, Milanez JS, Monteiro-Vitorello CB, Momo L, de Morais ZM, Vasconcellos SA, Marques MV, Ho PL, da Costa RMA. Leptospira interrogans serovar copenhageni harbors two lexA genes involved in SOS response. PLoS One 2013;8:e76419. [PMID: 24098496 PMCID: PMC3789691 DOI: 10.1371/journal.pone.0076419] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2012] [Accepted: 08/28/2013] [Indexed: 11/24/2022]  Open
10
Cambray G, Sanchez-Alberola N, Campoy S, Guerin É, Da Re S, González-Zorn B, Ploy MC, Barbé J, Mazel D, Erill I. Prevalence of SOS-mediated control of integron integrase expression as an adaptive trait of chromosomal and mobile integrons. Mob DNA 2011;2:6. [PMID: 21529368 PMCID: PMC3108266 DOI: 10.1186/1759-8753-2-6] [Citation(s) in RCA: 96] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2010] [Accepted: 04/30/2011] [Indexed: 11/26/2022]  Open
11
Lovley DR, Ueki T, Zhang T, Malvankar NS, Shrestha PM, Flanagan KA, Aklujkar M, Butler JE, Giloteaux L, Rotaru AE, Holmes DE, Franks AE, Orellana R, Risso C, Nevin KP. Geobacter: the microbe electric's physiology, ecology, and practical applications. Adv Microb Physiol 2011;59:1-100. [PMID: 22114840 DOI: 10.1016/b978-0-12-387661-4.00004-5] [Citation(s) in RCA: 412] [Impact Index Per Article: 29.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
12
Qu Y, Brown P, Barbe JF, Puljic M, Merino E, Adkins RM, Lovley DR, Krushkal J. GSEL Version 2, an Online Genome-Wide Query System of Operon Organization and Regulatory Sequence Elements of Geobacter sulfurreducens. OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY 2009;13:439-49. [DOI: 10.1089/omi.2009.0081] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
13
Yang MK, Hsu CH, Sung VL. Analyses of binding sequences of the two LexA proteins of Xanthomonas axonopodis pathovar citri. Mol Genet Genomics 2008;280:49-58. [PMID: 18437426 DOI: 10.1007/s00438-008-0344-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2007] [Accepted: 04/07/2008] [Indexed: 10/22/2022]
14
Mahadevan R, Yan B, Postier B, Nevin KP, Woodard TL, O'Neil R, Coppi MV, Methé BA, Krushkal J. Characterizing Regulation of Metabolism inGeobacter sulfurreducensthrough Genome-Wide Expression Data and Sequence Analysis. OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY 2008;12:33-59. [DOI: 10.1089/omi.2007.0043] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
15
Characterization of the SOS regulon of Caulobacter crescentus. J Bacteriol 2007;190:1209-18. [PMID: 18083815 DOI: 10.1128/jb.01419-07] [Citation(s) in RCA: 50] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
16
Erill I, Campoy S, Barbé J. Aeons of distress: an evolutionary perspective on the bacterial SOS response. FEMS Microbiol Rev 2007;31:637-56. [PMID: 17883408 DOI: 10.1111/j.1574-6976.2007.00082.x] [Citation(s) in RCA: 252] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]  Open
17
Cohabitation of two different lexA regulons in Pseudomonas putida. J Bacteriol 2007;189:8855-62. [PMID: 17933893 DOI: 10.1128/jb.01213-07] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]  Open
18
Yan B, Lovley DR, Krushkal J. Genome-wide similarity search for transcription factors and their binding sites in a metal-reducing prokaryote Geobacter sulfurreducens. Biosystems 2006;90:421-41. [PMID: 17184904 DOI: 10.1016/j.biosystems.2006.10.006] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2006] [Revised: 09/21/2006] [Accepted: 10/20/2006] [Indexed: 12/26/2022]
19
Holmes DE, Chaudhuri SK, Nevin KP, Mehta T, Methé BA, Liu A, Ward JE, Woodard TL, Webster J, Lovley DR. Microarray and genetic analysis of electron transfer to electrodes in Geobacter sulfurreducens. Environ Microbiol 2006;8:1805-15. [PMID: 16958761 DOI: 10.1111/j.1462-2920.2006.01065.x] [Citation(s) in RCA: 217] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
20
Hare JM, Perkins SN, Gregg-Jolly LA. A constitutively expressed, truncated umuDC operon regulates the recA-dependent DNA damage induction of a gene in Acinetobacter baylyi strain ADP1. Appl Environ Microbiol 2006;72:4036-43. [PMID: 16751513 PMCID: PMC1489636 DOI: 10.1128/aem.02774-05] [Citation(s) in RCA: 37] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2005] [Accepted: 02/28/2006] [Indexed: 11/20/2022]  Open
21
Fredrickson JK, Romine MF. Genome-assisted analysis of dissimilatory metal-reducing bacteria. Curr Opin Biotechnol 2005;16:269-74. [PMID: 15961027 DOI: 10.1016/j.copbio.2005.04.001] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2004] [Revised: 03/20/2005] [Accepted: 04/04/2005] [Indexed: 10/25/2022]
22
Yang MK, Su SR, Sung VL. Identification and characterization of a second lexA gene of Xanthomonas axonopodis Pathovar citri. Appl Environ Microbiol 2005;71:3589-98. [PMID: 16000766 PMCID: PMC1169025 DOI: 10.1128/aem.71.7.3589-3598.2005] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
23
Cuñé J, Cullen P, Mazon G, Campoy S, Adler B, Barbe J. The Leptospira interrogans lexA gene is not autoregulated. J Bacteriol 2005;187:5841-5. [PMID: 16077133 PMCID: PMC1196068 DOI: 10.1128/jb.187.16.5841-5845.2005] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
24
Campoy S, Salvador N, Cortés P, Erill I, Barbé J. Expression of canonical SOS genes is not under LexA repression in Bdellovibrio bacteriovorus. J Bacteriol 2005;187:5367-75. [PMID: 16030231 PMCID: PMC1196036 DOI: 10.1128/jb.187.15.5367-5375.2005] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
25
Min B, Cheng S, Logan BE. Electricity generation using membrane and salt bridge microbial fuel cells. WATER RESEARCH 2005;39:1675-86. [PMID: 15899266 DOI: 10.1016/j.watres.2005.02.002] [Citation(s) in RCA: 201] [Impact Index Per Article: 10.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2004] [Revised: 02/02/2005] [Indexed: 05/02/2023]
26
Logan BE, Murano C, Scott K, Gray ND, Head IM. Electricity generation from cysteine in a microbial fuel cell. WATER RESEARCH 2005;39:942-952. [PMID: 15743641 DOI: 10.1016/j.watres.2004.11.019] [Citation(s) in RCA: 190] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/28/2004] [Revised: 10/18/2004] [Accepted: 11/22/2004] [Indexed: 05/24/2023]
27
Nahrstedt H, Schröder C, Meinhardt F. Evidence for two recA genes mediating DNA repair in Bacillus megaterium. Microbiology (Reading) 2005;151:775-787. [PMID: 15758224 DOI: 10.1099/mic.0.27626-0] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
28
Holmes DE, Nevin KP, Lovley DR. In situ expression of nifD in Geobacteraceae in subsurface sediments. Appl Environ Microbiol 2005;70:7251-9. [PMID: 15574924 PMCID: PMC535187 DOI: 10.1128/aem.70.12.7251-7259.2004] [Citation(s) in RCA: 97] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
29
Abella M, Erill I, Jara M, Mazón G, Campoy S, Barbé J. Widespread distribution of a lexA-regulated DNA damage-inducible multiple gene cassette in the Proteobacteria phylum. Mol Microbiol 2004;54:212-22. [PMID: 15458417 DOI: 10.1111/j.1365-2958.2004.04260.x] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
30
Mazón G, Lucena JM, Campoy S, Fernández de Henestrosa AR, Candau P, Barbé J. LexA-binding sequences in Gram-positive and cyanobacteria are closely related. Mol Genet Genomics 2003;271:40-9. [PMID: 14652736 DOI: 10.1007/s00438-003-0952-x] [Citation(s) in RCA: 42] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2003] [Accepted: 10/29/2003] [Indexed: 10/26/2022]
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