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Shestakova A, Surkova D, Fatkulin A, Osmolovskiy A, Popova E. Draft genome sequence of Aspergillus ochraceus VKM-F4104D (L-1) producing peptidase activator of protein C. Microbiol Resour Announc 2024; 13:e0041624. [PMID: 39345109 PMCID: PMC11556116 DOI: 10.1128/mra.00416-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2024] [Accepted: 09/12/2024] [Indexed: 10/01/2024] Open
Abstract
Aspergillus ochraceus VKM-F4104D (L-1) is a saprotrophic fungus isolated from buried soils of Phanagoria (Russia). This strain is known as a producer of the fibrinolytic peptidase-activating plasma protein C. We have sequenced and assembled its genome for a more detailed understanding of the fungus' physiology and encoded peptidases.
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Affiliation(s)
- Anna Shestakova
- Faculty of Biology, Department of Microbiology, M.V. Lomonosov Moscow State University, Moscow, Russia
- Faculty of Biology and Biotechnology, HSE University, Moscow, Russia
| | - Daria Surkova
- Faculty of Biology, Department of Microbiology, M.V. Lomonosov Moscow State University, Moscow, Russia
| | - Artem Fatkulin
- Laboratory of Molecular Physiology, HSE University, Moscow, Russia
| | - Alexander Osmolovskiy
- Faculty of Biology, Department of Microbiology, M.V. Lomonosov Moscow State University, Moscow, Russia
| | - Elizaveta Popova
- Faculty of Biology, Department of Microbiology, M.V. Lomonosov Moscow State University, Moscow, Russia
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Komarevtsev SK, Evseev PV, Shneider MM, Popova EA, Tupikin AE, Stepanenko VN, Kabilov MR, Shabunin SV, Osmolovskiy AA, Miroshnikov KA. Gene Analysis, Cloning, and Heterologous Expression of Protease from a Micromycete Aspergillus ochraceus Capable of Activating Protein C of Blood Plasma. Microorganisms 2021; 9:1936. [PMID: 34576831 PMCID: PMC8471544 DOI: 10.3390/microorganisms9091936] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2021] [Revised: 09/05/2021] [Accepted: 09/08/2021] [Indexed: 12/16/2022] Open
Abstract
Micromycetes are known to secrete numerous enzymes of biotechnological and medical potential. Fibrinolytic protease-activator of protein C (PAPC) of blood plasma from micromycete Aspergillus ochraceus VKM-F4104D was obtained in recombinant form utilising the bacterial expression system. This enzyme, which belongs to the proteinase-K-like proteases, is similar to the proteases encoded in the genomes of Aspergillus fumigatus ATCC MYA-4609, A. oryzae ATCC 42149 and A. flavus 28. Mature PAPC-4104 is 282 amino acids long, preceded by the 101-amino acid propeptide necessary for proper folding and maturation. The recombinant protease was identical to the native enzyme from micromycete in terms of its biological properties, including an ability to hydrolyse substrates of activated protein C (pGlu-Pro-Arg-pNA) and factor Xa (Z-D-Arg-Gly-Arg-pNA) in conjugant reactions with human blood plasma. Therefore, recombinant PAPC-4104 can potentially be used in medicine, veterinary science, diagnostics, and other applications.
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Affiliation(s)
- Sergei K. Komarevtsev
- Biology Department, Lomonosov Moscow State University, 119234 Moscow, Russia; (E.A.P.); (A.A.O.)
- All-Russian Scientific Research Veterinary Institute of Pathology, Pharmacology and Therapy, 394087 Voronezh, Russia; (S.V.S.); (K.A.M.)
| | - Peter V. Evseev
- Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997 Moscow, Russia; (P.V.E.); (M.M.S.); (V.N.S.)
| | - Mikhail M. Shneider
- Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997 Moscow, Russia; (P.V.E.); (M.M.S.); (V.N.S.)
| | - Elizaveta A. Popova
- Biology Department, Lomonosov Moscow State University, 119234 Moscow, Russia; (E.A.P.); (A.A.O.)
| | - Alexey E. Tupikin
- Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of the Russian Academy of Sciences, 630090 Novosibirsk, Russia; (A.E.T.); (M.R.K.)
| | - Vasiliy N. Stepanenko
- Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997 Moscow, Russia; (P.V.E.); (M.M.S.); (V.N.S.)
| | - Marsel R. Kabilov
- Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of the Russian Academy of Sciences, 630090 Novosibirsk, Russia; (A.E.T.); (M.R.K.)
| | - Sergei V. Shabunin
- All-Russian Scientific Research Veterinary Institute of Pathology, Pharmacology and Therapy, 394087 Voronezh, Russia; (S.V.S.); (K.A.M.)
| | - Alexander A. Osmolovskiy
- Biology Department, Lomonosov Moscow State University, 119234 Moscow, Russia; (E.A.P.); (A.A.O.)
- All-Russian Scientific Research Veterinary Institute of Pathology, Pharmacology and Therapy, 394087 Voronezh, Russia; (S.V.S.); (K.A.M.)
| | - Konstantin A. Miroshnikov
- All-Russian Scientific Research Veterinary Institute of Pathology, Pharmacology and Therapy, 394087 Voronezh, Russia; (S.V.S.); (K.A.M.)
- Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997 Moscow, Russia; (P.V.E.); (M.M.S.); (V.N.S.)
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Komarevtsev SK, Timorshina SN, Leontieva MR, Shabunin SV, Lobakova ES, Osmolovskiy AA. Effect of Immobilization of the Micromycete Aspergillus ochraceus VKM-F4104D in Polymeric Carriers on the Production of the Fibrinolytic Protease Activator of Blood Plasma Protein C. APPL BIOCHEM MICRO+ 2021. [DOI: 10.1134/s0003683821030078] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Komarevtsev SK, Popova EA, Kreyer VG, Miroshnikov KA, Osmolovskiy AA. Purification of the Protease Activator of Protein C of Human Blood Plasma Produced by the Micromycete Aspergillus ochraceus VKM F-4104D. APPL BIOCHEM MICRO+ 2020. [DOI: 10.1134/s0003683820010093] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Osmolovskiy AA, Lukianova AA, Zvonareva ES, Kreyer VG, Baranova NA, Egorov NS. Combined microbiological approach to screening of producers of proteases with hemostasis system proteins activity among micromycetes. BIOTECHNOLOGY REPORTS (AMSTERDAM, NETHERLANDS) 2018; 19:e00265. [PMID: 29992099 PMCID: PMC6036644 DOI: 10.1016/j.btre.2018.e00265] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/18/2018] [Revised: 06/12/2018] [Accepted: 06/12/2018] [Indexed: 11/18/2022]
Abstract
A scheme for screening of micromycetes - producers of proteases with the activity of hemostasis system proteins, based on their enzymatic indices determination and the activity towards chromogenic peptide substrates for proteins of the hemostasis system was developed. Depending on the ability of proteases producers to cleave such substrates, an enzymatic reaction in conditions containing human plasma is suggested, which makes it possible to identify the potentiality of the target plasma hemostasis proenzymes activation.
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Affiliation(s)
- Alexander A. Osmolovskiy
- Department of Microbiology, Faculty of Biology, Lomonosov Moscow State University, Moscow, Russian Federation
- Faculty of Biotechnology, Lomonosov Moscow State University, Moscow, Russian Federation
| | - Anna A. Lukianova
- Department of Microbiology, Faculty of Biology, Lomonosov Moscow State University, Moscow, Russian Federation
| | - Elena S. Zvonareva
- Department of Microbiology, Faculty of Biology, Lomonosov Moscow State University, Moscow, Russian Federation
| | - Valeriana G. Kreyer
- Department of Microbiology, Faculty of Biology, Lomonosov Moscow State University, Moscow, Russian Federation
| | - Nina A. Baranova
- Department of Microbiology, Faculty of Biology, Lomonosov Moscow State University, Moscow, Russian Federation
| | - Nikolay S. Egorov
- International Biotechnological Center, Lomonosov Moscow State University, Moscow, Russian Federation
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Zvonareva ES, Osmolovskiy AA, Kreier VG, Baranova NA, Kotova IB, Egorov NS. Production of Proteinase with Plasmin-Like and Prekallikrein Activating Activity by the Micromycete Aspergillus terreus. APPL BIOCHEM MICRO+ 2018. [DOI: 10.1134/s0003683818020151] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Osmolovskiy AA, Kreier VG, Baranova NA, Egorov NS. Properties of extracellular plasmin-like proteases of Aspergillus ochraceus micromycete. APPL BIOCHEM MICRO+ 2017. [DOI: 10.1134/s000368381704010x] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Osmolovskiy AA, Rukavitsyna ED, Kreier VG, Baranova NA, Egorov NS. Production of proteinases with fibrinolytic and fibrinogenolytic activity by a micromycete Aspergillus ochraceus. Microbiology (Reading) 2017. [DOI: 10.1134/s0026261717040105] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
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Sharkova TS, Kornienko EI, Osmolovskii AA, Kreier VG, Baranova NA, Egorov NS. Morphological and physiological properties of the micromycete Arthrobotrys longa, a producer of longolytin, a proteolytic complex with a thrombolytic effect. Microbiology (Reading) 2016. [DOI: 10.1134/s0026261716020168] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
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Zvonareva ES, Osmolovskiy AA, Kreyer VG, Baranova NA, Kotova IB, Egorov NS. [Identification of Target Extracellular Proteases--Activators of Proteins of Haemostasis System Produced by Micromycetes Aspergillus ochraceus and Aspergillus terreus]. RUSSIAN JOURNAL OF BIOORGANIC CHEMISTRY 2016; 41:559-64. [PMID: 26762093 DOI: 10.1134/s1068162015050155] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Effects of extracellular proteases of Aspergillus ochraceus and Aspergillus terreus on plasma hemostasis proteins, consist of initiating the activation of prothrombin complex proteins, was detected. Was discovered, that A. ochraceus proteases have a direct influence on protein C and coagulation factor X, and A. terreus proteases causes their activation indirectly through kallikrein system stimulation. The ability of extracellular proteases of micromycetes activate prekallikrein in human blood plasma on the example of A. terreus was first demonstrated.
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Osmolovskiy AA, Kreyer VG, Baranova NA, Kurakov AV, Egorov NS. Properties of extracellular proteinase—an activator of protein C in blood plasma formed by Aspergillus ochraceus. APPL BIOCHEM MICRO+ 2014. [DOI: 10.1134/s0003683815010123] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Osmolovskiy A, Zvonareva ES, Kreyer VG, Baranova NA, Egorov NS. The effects of micromycete extracellular proteases of the Aspergillus genus on the proteins of the haemostatic system. RUSSIAN JOURNAL OF BIOORGANIC CHEMISTRY 2014. [DOI: 10.1134/s1068162014060120] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Osmolovsky AA, Kreier VG, Baranova NA, Kurakov AV, Egorov NS. Production of extracellular proteinases—protein C activators of blood plasma—by the micromycete Aspergillus ochraceus during submerged and solid-state fermentation. APPL BIOCHEM MICRO+ 2013. [DOI: 10.1134/s0003683813060148] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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