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Lohrke F, Madai VI, Kossen T, Aydin OU, Behland J, Hilbert A, Mutke MA, Bendszus M, Sobesky J, Frey D. Perfusion parameter map generation from TOF-MRA in stroke using generative adversarial networks. Neuroimage 2024; 298:120770. [PMID: 39117094 DOI: 10.1016/j.neuroimage.2024.120770] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2024] [Revised: 06/28/2024] [Accepted: 08/02/2024] [Indexed: 08/10/2024] Open
Abstract
PURPOSE To generate perfusion parameter maps from Time-of-flight magnetic resonance angiography (TOF-MRA) images using artificial intelligence to provide an alternative to traditional perfusion imaging techniques. MATERIALS AND METHODS This retrospective study included a total of 272 patients with cerebrovascular diseases; 200 with acute stroke (from 2010 to 2018), and 72 with steno-occlusive disease (from 2011 to 2014). For each patient the TOF MRA image and the corresponding Dynamic susceptibility contrast magnetic resonance imaging (DSC-MRI) were retrieved from the datasets. The authors propose an adapted generative adversarial network (GAN) architecture, 3D pix2pix GAN, that generates common perfusion maps (CBF, CBV, MTT, TTP, Tmax) from TOF-MRA images. The performance was evaluated by the structural similarity index measure (SSIM). For a subset of 20 patients from the acute stroke dataset, the Dice coefficient was calculated to measure the overlap between the generated and real hypoperfused lesions with a time-to-maximum (Tmax) > 6 s. RESULTS The GAN model exhibited high visual overlap and performance for all perfusion maps in both datasets: acute stroke (mean SSIM 0.88-0.92, mean PSNR 28.48-30.89, mean MAE 0.02-0.04 and mean NRMSE 0.14-0.37) and steno-occlusive disease patients (mean SSIM 0.83-0.98, mean PSNR 23.62-38.21, mean MAE 0.01-0.05 and mean NRMSE 0.03-0.15). For the overlap analysis for lesions with Tmax>6 s, the median Dice coefficient was 0.49. CONCLUSION Our AI model can successfully generate perfusion parameter maps from TOF-MRA images, paving the way for a non-invasive alternative for assessing cerebral hemodynamics in cerebrovascular disease patients. This method could impact the stratification of patients with cerebrovascular diseases. Our results warrant more extensive refinement and validation of the method.
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Affiliation(s)
- Felix Lohrke
- CLAIM - Charité Lab for Artificial Intelligence in Medicine, Charité Universitätsmedizin Berlin, Germany
| | - Vince Istvan Madai
- QUEST Center for Transforming Biomedical Research, Berlin Institute of Health (BIH), Charité Universitätsmedizin Berlin, Germany; School of Computing and Digital Technology, Faculty of Computing, Engineering and the Built Environment, Birmingham City University, United Kingdom
| | - Tabea Kossen
- CLAIM - Charité Lab for Artificial Intelligence in Medicine, Charité Universitätsmedizin Berlin, Germany
| | - Orhun Utku Aydin
- CLAIM - Charité Lab for Artificial Intelligence in Medicine, Charité Universitätsmedizin Berlin, Germany
| | - Jonas Behland
- CLAIM - Charité Lab for Artificial Intelligence in Medicine, Charité Universitätsmedizin Berlin, Germany
| | - Adam Hilbert
- CLAIM - Charité Lab for Artificial Intelligence in Medicine, Charité Universitätsmedizin Berlin, Germany
| | | | - Martin Bendszus
- Department of Neuroradiology, Heidelberg University Hospital, Heidelberg, Germany
| | - Jan Sobesky
- Centre for Stroke Research Berlin, Charité Universitätsmedizin Berlin, Germany; Johanna-Etienne-Hospital, Neuss, Germany
| | - Dietmar Frey
- CLAIM - Charité Lab for Artificial Intelligence in Medicine, Charité Universitätsmedizin Berlin, Germany; Department of Neurosurgery, Charité Universitätsmedizin Berlin, Germany.
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Kossen T, Madai VI, Mutke MA, Hennemuth A, Hildebrand K, Behland J, Aslan C, Hilbert A, Sobesky J, Bendszus M, Frey D. Image-to-image generative adversarial networks for synthesizing perfusion parameter maps from DSC-MR images in cerebrovascular disease. Front Neurol 2023; 13:1051397. [PMID: 36703627 PMCID: PMC9871486 DOI: 10.3389/fneur.2022.1051397] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2022] [Accepted: 12/15/2022] [Indexed: 01/11/2023] Open
Abstract
Stroke is a major cause of death or disability. As imaging-based patient stratification improves acute stroke therapy, dynamic susceptibility contrast magnetic resonance imaging (DSC-MRI) is of major interest in image brain perfusion. However, expert-level perfusion maps require a manual or semi-manual post-processing by a medical expert making the procedure time-consuming and less-standardized. Modern machine learning methods such as generative adversarial networks (GANs) have the potential to automate the perfusion map generation on an expert level without manual validation. We propose a modified pix2pix GAN with a temporal component (temp-pix2pix-GAN) that generates perfusion maps in an end-to-end fashion. We train our model on perfusion maps infused with expert knowledge to encode it into the GANs. The performance was trained and evaluated using the structural similarity index measure (SSIM) on two datasets including patients with acute stroke and the steno-occlusive disease. Our temp-pix2pix architecture showed high performance on the acute stroke dataset for all perfusion maps (mean SSIM 0.92-0.99) and good performance on data including patients with the steno-occlusive disease (mean SSIM 0.84-0.99). While clinical validation is still necessary for future studies, our results mark an important step toward automated expert-level perfusion maps and thus fast patient stratification.
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Affiliation(s)
- Tabea Kossen
- Charité Lab for Artificial Intelligence in Medicine (CLAIM), Charité-Universitätsmedizin Berlin, Berlin, Germany,Department of Computer Engineering and Microelectronics, Computer Vision and Remote Sensing, Technical University Berlin, Berlin, Germany,*Correspondence: Tabea Kossen ✉
| | - Vince I. Madai
- Charité Lab for Artificial Intelligence in Medicine (CLAIM), Charité-Universitätsmedizin Berlin, Berlin, Germany,QUEST Center for Responsible Research, Berlin Institute of Health (BIH), Charité-Universitätsmedizin Berlin, Berlin, Germany,Faculty of Computing, Engineering and the Built Environment, School of Computing and Digital Technology, Birmingham City University, Birmingham, United Kingdom
| | - Matthias A. Mutke
- Department of Neuroradiology, Heidelberg University Hospital, Heidelberg, Germany
| | - Anja Hennemuth
- Department of Computer Engineering and Microelectronics, Computer Vision and Remote Sensing, Technical University Berlin, Berlin, Germany,Institute for Imaging Science and Computational Modelling in Cardiovascular Medicine, Charité-Universitätsmedizin Berlin, Berlin, Germany,Fraunhofer MEVIS, Bremen, Germany
| | - Kristian Hildebrand
- Department of Computer Science and Media, Berlin University of Applied Sciences and Technology, Berlin, Germany
| | - Jonas Behland
- Charité Lab for Artificial Intelligence in Medicine (CLAIM), Charité-Universitätsmedizin Berlin, Berlin, Germany
| | - Cagdas Aslan
- Department of Computer Science and Media, Berlin University of Applied Sciences and Technology, Berlin, Germany
| | - Adam Hilbert
- Charité Lab for Artificial Intelligence in Medicine (CLAIM), Charité-Universitätsmedizin Berlin, Berlin, Germany
| | - Jan Sobesky
- Center for Stroke Research Berlin, Charité-Universitätsmedizin Berlin, Berlin, Germany,Johanna-Etienne-Hospital, Neuss, Germany
| | - Martin Bendszus
- Department of Neuroradiology, Heidelberg University Hospital, Heidelberg, Germany
| | - Dietmar Frey
- Charité Lab for Artificial Intelligence in Medicine (CLAIM), Charité-Universitätsmedizin Berlin, Berlin, Germany
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Fiehler J. Do we need CT perfusion for stroke patients? Define your terms. J Neurointerv Surg 2022; 14:847-848. [PMID: 35961677 DOI: 10.1136/jnis-2022-019481] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/02/2022] [Indexed: 11/04/2022]
Affiliation(s)
- Jens Fiehler
- Department of Neuroradiology, University Medical Center Hamburg Eppendorf, Hamburg, Germany
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Wardlaw JM, Mair G, von Kummer R, Williams MC, Li W, Storkey AJ, Trucco E, Liebeskind DS, Farrall A, Bath PM, White P. Accuracy of Automated Computer-Aided Diagnosis for Stroke Imaging: A Critical Evaluation of Current Evidence. Stroke 2022; 53:2393-2403. [PMID: 35440170 DOI: 10.1161/strokeaha.121.036204] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
There is increasing interest in computer applications, using artificial intelligence methodologies, to perform health care tasks previously performed by humans, particularly in medical imaging for diagnosis. In stroke, there are now commercial artificial intelligence software for use with computed tomography or MR imaging to identify acute ischemic brain tissue pathology, arterial obstruction on computed tomography angiography or as hyperattenuated arteries on computed tomography, brain hemorrhage, or size of perfusion defects. A rapid, accurate diagnosis may aid treatment decisions for individual patients and could improve outcome if it leads to effective and safe treatment; or conversely, to disaster if a delayed or incorrect diagnosis results in inappropriate treatment. Despite this potential clinical impact, diagnostic tools including artificial intelligence methods are not subjected to the same clinical evaluation standards as are mandatory for drugs. Here, we provide an evidence-based review of the pros and cons of commercially available automated methods for medical imaging diagnosis, including those based on artificial intelligence, to diagnose acute brain pathology on computed tomography or magnetic resonance imaging in patients with stroke.
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Affiliation(s)
- Joanna M Wardlaw
- Centre for Clinical Brain Sciences, UK Dementia Research Institute Centre at the University of Edinburgh, Little France, United Kingdom (J.M.W., G.M., W.L., A.F.)
| | - Grant Mair
- Centre for Clinical Brain Sciences, UK Dementia Research Institute Centre at the University of Edinburgh, Little France, United Kingdom (J.M.W., G.M., W.L., A.F.)
| | - Rüdiger von Kummer
- Institute of Diagnostic and Interventional Neuroradiology, Universitätsklinikum Carl Gustav Carus, Dresden, Germany (R.v.K.)
| | - Michelle C Williams
- Centre for Cardiovascular Science, University of Edinburgh, Little France, United Kingdom (M.C.W.)
| | - Wenwen Li
- Centre for Clinical Brain Sciences, UK Dementia Research Institute Centre at the University of Edinburgh, Little France, United Kingdom (J.M.W., G.M., W.L., A.F.)
| | | | - Emanuel Trucco
- VAMPIRE project, Computing, School of Science and Engineering, University of Dundee (E.T.)
| | | | - Andrew Farrall
- Centre for Clinical Brain Sciences, UK Dementia Research Institute Centre at the University of Edinburgh, Little France, United Kingdom (J.M.W., G.M., W.L., A.F.)
| | - Philip M Bath
- Stroke Trials Unit, Mental Health & Clinical Neuroscience, University of Nottingham, Queen's Medical Centre campus, United Kingdom (P.M.B.)
| | - Philip White
- Translational and Clinical Research Institute, Newcastle University, Newcastle upon Tyne and Newcastle upon Tyne Hospitals NHS Trust, United Kingdom (P.W.)
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Potreck A, Scheidecker E, Weyland CS, Neuberger U, Herweh C, Möhlenbruch MA, Chen M, Nagel S, Bendszus M, Seker F. RAPID CT Perfusion-Based Relative CBF Identifies Good Collateral Status Better Than Hypoperfusion Intensity Ratio, CBV-Index, and Time-to-Maximum in Anterior Circulation Stroke. AJNR Am J Neuroradiol 2022; 43:960-965. [PMID: 35680162 DOI: 10.3174/ajnr.a7542] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2021] [Accepted: 04/27/2022] [Indexed: 12/16/2022]
Abstract
BACKGROUND AND PURPOSE Information of collateral flow may help to determine eligibility for thrombectomy. Our aim was to identify CT perfusion-based surrogate parameters of good collateral status in acute anterior circulation ischemic stroke. MATERIALS AND METHODS In this retrospective study, we assessed the collateral status of 214 patients who presented with acute ischemic stroke due to occlusion of the MCA M1 segment or the carotid terminus. Collaterals were assessed on dynamic CTA images analogous to the multiphase CTA score by Menon et al. CT perfusion parameters (time-to-maximum, relative CBF, hypoperfusion intensity ratio, and CBV-index) were assessed with RAPID software. The Spearman rank correlation and receiver operating characteristic analyses were performed to identify the parameters that correlate with collateral scores and good collateral supply (defined as a collateral score of ≥4). RESULTS The Spearman rank correlation was highest for a relative CBF < 38% volume (ρ = -0.66, P < .001), followed by the hypoperfusion intensity ratio (ρ = -0.49, P < .001), CBV-index (ρ = 0.51, P < .001), and time-to-maximum > 8 seconds (ρ = -0.54, P < .001). Good collateral status was better identified by a relative CBF < 38% at a lesion size <27 mL (sensitivity of 75%, specificity of 80%) compared with a hypoperfusion intensity ratio of <0.4 (sensitivity of 75%, specificity of 62%), CBV-index of >0.8 (sensitivity of 60%, specificity of 78%), and time-to-maximum > 8 seconds (sensitivity of 68%, specificity of 76%). CONCLUSIONS Automated CT perfusion analysis allows accurate identification of collateral status in acute ischemic stroke. A relative CBF < 38% may be a better perfusion-based indicator of good collateral supply compared with time-to-maximum, the hypoperfusion intensity ratio, and the CBV-index.
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Affiliation(s)
- A Potreck
- From the Department of Neuroradiology (A.P., E.S., C.S.W., U.N., C.H., M.A.M., M.B., F.S.)
| | - E Scheidecker
- From the Department of Neuroradiology (A.P., E.S., C.S.W., U.N., C.H., M.A.M., M.B., F.S.)
| | - C S Weyland
- From the Department of Neuroradiology (A.P., E.S., C.S.W., U.N., C.H., M.A.M., M.B., F.S.)
| | - U Neuberger
- From the Department of Neuroradiology (A.P., E.S., C.S.W., U.N., C.H., M.A.M., M.B., F.S.)
| | - C Herweh
- From the Department of Neuroradiology (A.P., E.S., C.S.W., U.N., C.H., M.A.M., M.B., F.S.)
| | - M A Möhlenbruch
- From the Department of Neuroradiology (A.P., E.S., C.S.W., U.N., C.H., M.A.M., M.B., F.S.)
| | - M Chen
- Neurology (M.C., S.N.), Heidelberg University Hospital, Heidelberg, Germany
| | - S Nagel
- Neurology (M.C., S.N.), Heidelberg University Hospital, Heidelberg, Germany
| | - M Bendszus
- From the Department of Neuroradiology (A.P., E.S., C.S.W., U.N., C.H., M.A.M., M.B., F.S.)
| | - F Seker
- From the Department of Neuroradiology (A.P., E.S., C.S.W., U.N., C.H., M.A.M., M.B., F.S.)
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