Improved DCT-based nonlocal means filter for MR images denoising

An Intuitionistic Fuzzy C-Means and Local Information-Based DCT Filtering for Fast Brain MRI Segmentation

Structural and photometric anomalies in the brain magnetic resonance images (MRIs) affect the segmentation performance. Moreover, a sudden change in intensity between two boundaries of the brain tissues makes it prone to data uncertainty, resulting in the misclassification of the pixels lying near the cluster boundaries. The discrete cosine transform (DCT) domain-based filtering is an effective way to deal with structural and photometric anomalies, while the intuitionistic fuzzy C-means (IFCM) clustering can handle the uncertainty using the intuitionistic fuzzy set (IFS) theory. In this background, we propose two novel approaches, namely, the DCT-based intuitionistic fuzzy C-means (DCT-IFCM) and the DCT-based local information IFCM (DCT-LIFCM), which effectively deal with the Rician and Gaussian noises and also handle the data uncertainty problem to provide high segmentation accuracy. The DCT-IFCM approach performs the histogram-based segmentation, while the DCT-LIFCM uses the pixel-wise computation to include the spatial information. Although the DCT-LIFCM delivers slightly better performance than the DCT-IFCM, the latter is very fast in providing equally high segmentation accuracy. An exhaustive performance analysis is provided to demonstrate the superior performance of the proposed algorithms compared with the state-of-the-art algorithms, including those based on the DCT-based filtering approach and the IFS theory.

MRI Denoising Using Pixel-Wise Threshold Selection

Magnetic resonance imaging (MRI) has emerged as a promising technique for non-invasive medical imaging. The primary challenge in MRI is the trade-off between image visual quality and acquisition time. Current MRI image denoising algorithms employ global thresholding to denoise the whole image, which leads to inadequate denoising or image distortion. This study introduces a novel pixel-wise (localized) thresholding approach of singular vectors, obtained from singular value decomposition, to denoise magnetic resonance (MR) images. The pixel-wise thresholding of singular vectors is performed using separate singular values as thresholds at each pixel, which is advantageous given the spatial noise variation throughout the image. The method presented is validated on MR images of a standard phantom approved by the magnetic resonance accreditation program (MRAP). The denoised images display superior visual quality and recover minute structural information otherwise suppressed in the noisy image. The increase in peak-signal-to-noise-ratio (PSNR) and contrast-to-noise-ratio (CNR) values of ≥ 18% and ≥ 200% of the denoised images, respectively, imply efficient noise removal and visual quality enhancement. The structural similarity index (SSIM) of ≥ 0.95 for denoised images indicates that the crucial structural information is recovered through the presented method. A comparison with the standard filtering methods widely used for MRI denoising establishes the superior performance of the presented method. The presented pixel-wise denoising technique reduces the scan time by 2-3 times and has the potential to be integrated into any MRI system to obtain faster and better quality images.

Research related to the diagnosis of prostate cancer based on machine learning medical images: A review

BACKGROUND

Prostate cancer is currently the second most prevalent cancer among men. Accurate diagnosis of prostate cancer can provide effective treatment for patients and greatly reduce mortality. The current medical imaging tools for screening prostate cancer are mainly MRI, CT and ultrasound. In the past 20 years, these medical imaging methods have made great progress with machine learning, especially the rise of deep learning has led to a wider application of artificial intelligence in the use of image-assisted diagnosis of prostate cancer.

METHOD

This review collected medical image processing methods, prostate and prostate cancer on MR images, CT images, and ultrasound images through search engines such as web of science, PubMed, and Google Scholar, including image pre-processing methods, segmentation of prostate gland on medical images, registration between prostate gland on different modal images, detection of prostate cancer lesions on the prostate.

CONCLUSION

Through these collated papers, it is found that the current research on the diagnosis and staging of prostate cancer using machine learning and deep learning is in its infancy, and most of the existing studies are on the diagnosis of prostate cancer and classification of lesions, and the accuracy is low, with the best results having an accuracy of less than 0.95. There are fewer studies on staging. The research is mainly focused on MR images and much less on CT images, ultrasound images.

DISCUSSION

Machine learning and deep learning combined with medical imaging have a broad application prospect for the diagnosis and staging of prostate cancer, but the research in this area still has more room for development.

The Value of High-Resolution Ultrasound Combined with Shear-Wave Elastography under Artificial Intelligence Algorithm in Quantitative Evaluation of Skin Thickness in Localized Scleroderma

The aim of this study was to explore the value of high-resolution ultrasound combined with shear-wave elastography (SWE) in measuring skin thickness in patients with localized scleroderma (LS). Fifty patients with LS diagnosed by pathology in the hospital were selected as the research object, with a total of 96 lesions. Healthy people (50 cases) in the same period were selected as the control group. The skin thickness of the abdomen, chest, and left finger of the two groups was compared. The traditional nonlocal means (NLM) algorithm was improved by changing the Euclidean distance and introducing a cosine function, which was applied to the ultrasonic imaging intelligent diagnosis of patients with localized scleroderma. SWE imaging was evaluated, and the results demonstrated that LS lesion edema stage accounted for 7.29%, hardening stage occupied 43.75%, and the proportion of atrophy stage reached 48.96%. When the size of shell was 1 mm, maximum elastic modulus (E max) was 0.984, mean of elastic modulus (Emean) was 0.926, and electro-static discharge (Esd) was 0.965. When the size of shell was 2 mm, the elastic moduli around lesions were as follows: Emax was 0.998, Emean was 0.968, and Esd was 0.997. By comparing the skin thickness of the abdomen, chest, and left finger, it was found that there was a significant difference between the LS group and the control group (P < 0.05). When the shell was 2 mm, the effect of sensitivity specificity on SWE imaging was better than that when the shell was 1 mm. In summary, the improved NLM algorithm showed excellent denoising effects on the ultrasonic images of LS patients. Besides, it could assist clinicians in ultrasonic imaging diagnosis for LS patients and effectively improve the diagnostic accuracy of diseases.

Intelligent Noise Reduction Algorithm to Evaluate the Correlation between Human Fat Deposits and Uterine Fibroids under Ultrasound Imaging

This study aimed to realize the automatic diagnosis of fatty degeneration of uterine fibroids. In this study, the traditional nonlocal means (NLM) algorithm was improved by changing the Euclidean distance and introducing a cosine function and applied to the ultrasonic imaging intelligent diagnosis of patients with fatty degeneration of uterine fibroids. Then, the noise reduction effect of the improved NLM algorithm was evaluated based on several indicators, such as peak signal-to-noise ratio (PSNR), mean square error (MSE), contrast-to-noise ratio (CNR), figure of merit (FOM), and structural similarity (SSIM). The accuracy, sensitivity, specificity, and F1 score were adopted to evaluate the improved NLM algorithm for diagnosing fatty degeneration of uterine fibroids, and the Perona-Malik (PM) algorithm and NLM algorithm were used for comparative analysis. The results showed that after the ultrasound images of patients with uterine fibroids were denoised using the improved NLM algorithm, the PSNR, MSE, CNR, FOM, and SSIM were obviously better than the same indicators of the image processed with the PM algorithm and the NLM algorithm, and the differences were statistically significant (P < 0.05). The diagnosis results of patients with fatty degeneration of uterine fibroids found that there was only one patient with missed diagnosis after the ultrasound image was processed with NLM algorithm, and there was no statistical difference between the improved NLM algorithm and the assisted diagnosis accuracy of the pathological examination results (P > 0.05). The average noise reduction time of the PM algorithm, NLM algorithm, and the improved NLM algorithm was 16.38 ± 4.33 s, 18.01 ± 5.14 s, and 23.81 ± 4.62 s, respectively. The diagnosis rate before improvement was 75.0%, the diagnosis accuracy rate for PM was 79.69%, and that after improvement was 85.94%. In summary, the improved NLM algorithm showed a good noise reduction effect on ultrasound images of patients with uterine fibroids, could improve the diagnosis accuracy of fatty degeneration of uterine fibroids, and could assist clinicians in the ultrasound imaging diagnosis of patients with uterine fibroids.

Denoising Medical Images Using Machine Learning, Deep Learning Approaches: A Survey

OBJECTIVE

Several denoising methods for medical images have been applied, such as Wavelet Transform, CNN, linear and Non-linear methods.

METHODS

In this paper, A median filter algorithm will be modified and the image denoising method to wavelet transform and Non-local means (NLM), deep convolutional neural network (Dn- CNN), Gaussian noise, and Salt and pepper noise used in the medical image is explained.

RESULTS

PSNR values of the CNN method are higher and showed better results than different filters (Adaptive Wiener filter, Median filter, and Adaptive Median filter, Wiener filter).

CONCLUSION

Denoising methods performance with indices SSIM, PSNR, and MSE have been tested, and the results of simulation image denoising are also presented in this article.

Denoising of 3D Brain MR Images with Parallel Residual Learning of Convolutional Neural Network Using Global and Local Feature Extraction

Magnetic resonance (MR) images often suffer from random noise pollution during image acquisition and transmission, which impairs disease diagnosis by doctors or automated systems. In recent years, many noise removal algorithms with impressive performances have been proposed. In this work, inspired by the idea of deep learning, we propose a denoising method named 3D-Parallel-RicianNet, which will combine global and local information to remove noise in MR images. Specifically, we introduce a powerful dilated convolution residual (DCR) module to expand the receptive field of the network and to avoid the loss of global features. Then, to extract more local information and reduce the computational complexity, we design the depthwise separable convolution residual (DSCR) module to learn the channel and position information in the image, which not only reduces parameters dramatically but also improves the local denoising performance. In addition, a parallel network is constructed by fusing the features extracted from each DCR module and DSCR module to improve the efficiency and reduce the complexity for training a denoising model. Finally, a reconstruction (REC) module aims to construct the clean image through the obtained noise deviation and the given noisy image. Due to the lack of ground-truth images in the real MR dataset, the performance of the proposed model was tested qualitatively and quantitatively on one simulated T1-weighted MR image dataset and then expanded to four real datasets. The experimental results show that the proposed 3D-Parallel-RicianNet network achieves performance superior to that of several state-of-the-art methods in terms of the peak signal-to-noise ratio, structural similarity index, and entropy metric. In particular, our method demonstrates powerful abilities in both noise suppression and structure preservation.

A Survey on State-of-the-art Denoising Techniques for Brain Magnetic Resonance Images

The accuracy of the magnetic resonance (MR) image diagnosis depends on the quality of the image, which degrades mainly due to noise and artifacts. The noise is introduced because of erroneous imaging environment or distortion in the transmission system. Therefore, denoising methods play an important role in enhancing the image quality. However, a tradeoff between denoising and preserving the structural details is required. Most of the existing surveys are conducted on a specific MR image modality or on limited denoising schemes. In this context, a comprehensive review on different MR image denoising techniques is inevitable. This survey suggests a new direction in categorizing the MR image denoising techniques. The categorization of the different image models used in medical image processing serves as the basis of our classification. This study includes recent improvements on deep learning-based denoising methods alongwith important traditional MR image denoising methods. The major challenges and their scope of improvement are also discussed. Further, many more evaluation indices are considered for a fair comparison. An elaborate discussion on selecting appropriate method and evaluation metric as per the kind of data is presented. This study may encourage researchers for further work in this domain.

Image Denoising Using Non-Local Means (NLM) Approach in Magnetic Resonance (MR) Imaging: A Systematic Review

The non-local means (NLM) noise reduction algorithm is well known as an excellent technique for removing noise from a magnetic resonance (MR) image to improve the diagnostic accuracy. In this study, we undertook a systematic review to determine the effectiveness of the NLM noise reduction algorithm in MR imaging. A systematic literature search was conducted of three databases of publications dating from January 2000 to March 2020; of the 82 publications reviewed, 25 were included in this study. The subjects were categorized into four major frameworks and analyzed for each research result. Research in NLM noise reduction for MR images has been increasing worldwide; however, it was found to have slightly decreased since 2016. It was found that the NLM technique was most frequently used on brain images taken using the general MR imaging technique; these were most frequently performed during simultaneous real and simulated experimental studies. In particular, comparison parameters were frequently used to evaluate the effectiveness of the algorithm on MR images. The ultimate goal is to provide an accurate method for the diagnosis of disease, and our conclusion is that the NLM noise reduction algorithm is a promising method of achieving this goal.

MRI Imaging, Comparison of MRI with other Modalities, Noise in MRI Images and Machine Learning Techniques for Noise Removal: A Review

BACKGROUND

Medical imaging is to assume greater and greater significance in an efficient and precise diagnosis process.

DISCUSSION

It is a set of various methodologies which are used to capture internal or external images of the human body and organs for clinical and diagnosis needs to examine human form for various kind of ailments. Computationally intelligent machine learning techniques and their application in medical imaging can play a significant role in expediting the diagnosis process and making it more precise.

CONCLUSION

This review presents an up-to-date coverage about research topics which include recent literature in the areas of MRI imaging, comparison with other modalities, noise in MRI and machine learning techniques to remove the noise.

Local Complexity Estimation Based Filtering Method in Wavelet Domain for Magnetic Resonance Imaging Denoising

In this paper, we propose the local complexity estimation based filtering method in wavelet domain for MRI (magnetic resonance imaging) denoising. A threshold selection methodology is proposed in which the edge and detail preservation properties for each pixel are determined by the local complexity of the input image. In the proposed filtering method, the current wavelet kernel is compared with a threshold to identify the signal- or noise-dominant pixels in a scale providing a good visual quality avoiding blurred and over smoothened processed images. We present a comparative performance analysis with different wavelets to find the optimal wavelet for MRI denoising. Numerical experiments and visual results in simulated MR images degraded with Rician noise demonstrate that the proposed algorithm consistently outperforms other denoising methods by balancing the tradeoff between noise suppression and fine detail preservation. The proposed algorithm can enhance the contrast between regions allowing the delineation of the regions of interest between different textures or tissues in the processed images. The proposed approach produces a satisfactory result in the case of real MRI denoising by balancing the detail preservation and noise removal, by enhancing the contrast between the regions of the image. Additionally, the proposed algorithm is compared with other approaches in the case of Additive White Gaussian Noise (AWGN) using standard images to demonstrate that the proposed approach does not need to be adapted specifically to Rician or AWGN noise; it is an advantage of the proposed approach in comparison with other methods. Finally, the proposed scheme is simple, efficient and feasible for MRI denoising.