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Nishimura A, Takayama K. Genetic Admixture and Novel Host Shifts in a Parasitic Plant, Orobanche boninsimae (Orobanchaceae), Endemic to the Ogasawara Islands. Mol Ecol 2025; 34:e17687. [PMID: 39963816 DOI: 10.1111/mec.17687] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2023] [Revised: 01/24/2025] [Accepted: 01/28/2025] [Indexed: 03/04/2025]
Abstract
Parasitic plants depend on other plants for nutrients and water and have undergone evolutionary processes tightly linked to their host range. As parasitic adaptations specialise host range, host shifts between parasite lineages are considered essential events that can lead to genetic differentiation and speciation. A thorough examination of population genealogy covering the entire host range is imperative to comprehend the impact of host-shift evolution on parasitic plant species diversity. Therefore, we investigated the population genetic structure of Orobanche boninsimae (Orobanchaceae), an endemic parasitic plant in the Bonin (Ogasawara) Islands. The host species of O. boninsimae are entirely distinct from those of other Orobanche species and show differences between geographically isolated islands, even though the host species coexist in some localities. Genetic differentiation was observed among populations from different islands, corresponding to variations in the host range of O. boninsimae. Demographic analysis supported a scenario in which populations on the southern island emerged through the admixture of populations parasitic on the different host species from the northern islands. This suggests a progressive colonisation process, wherein continental ancestors established in the northern islands underwent a host shift, followed by the migration of a lineage to the southern island. Notably, host shift across islands may have occurred through the admixture of populations. These findings provide a foundation for elucidating the roles of host plants and geographical isolation in the speciation of parasitic plants and enhance our understanding of the mechanisms driving parasitic plant diversification.
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Affiliation(s)
- Akihiro Nishimura
- Department of Biology, Graduate School of Science, Kobe University, Kobe, Hyogo, Japan
| | - Koji Takayama
- Department of Botany, Graduate School of Science, Kyoto University, Kyoto, Japan
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Yousefi AR, Ahmadikhah A, Fotovat R, Rohani L, Soheily F, Uberti DL, Mastinu A. Molecular Characterization of a New Ecotype of Holoparasitic Plant Orobanche L. on Host Weed Xanthium spinosum L. PLANTS (BASEL, SWITZERLAND) 2022; 11:1406. [PMID: 35684179 PMCID: PMC9182829 DOI: 10.3390/plants11111406] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/07/2022] [Revised: 05/15/2022] [Accepted: 05/24/2022] [Indexed: 06/15/2023]
Abstract
A species of Orobanche was observed on spiny cocklebur (Xanthium spinosum) for the first time in Iran and tentatively was named IR-Iso.This study was conducted to make a phylogenetic analysis of the Orobanche using 5.8S rRNA region sequences, and also to better understand its sequence pattern. The full-length ITS1-ITS2 region of the new Orobanche isolate was PCR-amplified from the holoparasitic plant parasitizing X. spinosum. Sequences of the amplicons from the isolate were 100% identical but differed by 5.6-6.7% from most homologous GenBank accessions to 37.9% divergence from distant species. The analysis of the molecular variance showed that variation between-population (61.9%, SE = 0.04) was larger than within-population. Neighbor-joining analysis placed the Iranian isolate in the same clade as most of the Orobanche and Phelipanche species. The isolate was more closely related to Orobanche aegyptiaca (from China), and this was confirmed by using a structure analysis. However, complementary analyses showed that the Iranian isolate has a unique nucleotide substitution pattern, and hence it was considered as an ecotype of O. aegyptiaca (ecotype Alborzica). In this paper we report on the association between this new ecotype of Orobanche and X. spinosum.
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Affiliation(s)
- Ali Reza Yousefi
- Department of Plant Production & Genetics, University of Zanjan, Zanjan 45371, Iran; (R.F.); (L.R.); (F.S.)
| | - Asadollah Ahmadikhah
- Department of Plant Sciences and Biotechnology, Faculty of Life Sciences and Biotechnology, Shahid Beheshti University, Tehran 31587, Iran;
| | - Reza Fotovat
- Department of Plant Production & Genetics, University of Zanjan, Zanjan 45371, Iran; (R.F.); (L.R.); (F.S.)
| | - Leila Rohani
- Department of Plant Production & Genetics, University of Zanjan, Zanjan 45371, Iran; (R.F.); (L.R.); (F.S.)
| | - Foad Soheily
- Department of Plant Production & Genetics, University of Zanjan, Zanjan 45371, Iran; (R.F.); (L.R.); (F.S.)
| | - Daniela Letizia Uberti
- Department of Molecular and Translational Medicine, University of Brescia, 25123 Brescia, Italy;
| | - Andrea Mastinu
- Department of Molecular and Translational Medicine, University of Brescia, 25123 Brescia, Italy;
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Piwowarczyk R, Schneider AC, Góralski G, Kwolek D, Denysenko-Bennett M, Burda A, Ruraż K, Joachimiak AJ, Pedraja ÓS. Phylogeny and historical biogeography analysis support Caucasian and Mediterranean centres of origin of key holoparasitic Orobancheae (Orobanchaceae) lineages. PHYTOKEYS 2021; 174:165-194. [PMID: 33776529 PMCID: PMC7979677 DOI: 10.3897/phytokeys.174.62524] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/28/2020] [Accepted: 02/14/2021] [Indexed: 05/28/2023]
Abstract
The extensive diversity of the tribe Orobancheae, the most species-rich lineage of holoparasitic Orobanchaceae, is concentrated in the Caucasus and Mediterranean regions of the Old World. This extant diversity has inspired hypotheses that these regions are also centres of origin of its key lineages, however the ability to test hypotheses has been limited by a lack of sampling and phylogenetic information about the species, especially in the Caucasus region. First, we assessed the phylogenetic relationships of several poorly known, problematic, or newly described species and host-races of four genera of Orobancheae occurring in the Caucasus region-Cistanche, Phelypaea, Phelipanche and Orobanche-using nuclear ribosomal (ITS) and plastid (trnL-trnF) sequence data. Then we applied a probablistic dispersal-extinction-cladogenesis model of historical biogeography across a more inclusive clade of holoparasites, to explicitly test hypotheses of Orobancheae diversification and historical biogeography shifts. In sum, we sampled 548 sequences (including 196 newly generated) from 13 genera, 140 species, and 175 taxa across 44 countries. We find that the Western Asia (particularly the Caucasus) and the Mediterranean are the centre of origin for large clades of holoparasitic Orobancheae within the last 6 million years. In the Caucasus, the centres of diversity are composed both of long-branch taxa and shallow, recently diversified clades, while Orobancheae diversity in the Mediterranean appears to represent mainly recent diversification.
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Affiliation(s)
- Renata Piwowarczyk
- Center for Research and Conservation of Biodiversity, Department of Environmental Biology, Institute of Biology, Jan Kochanowski University, Uniwersytecka 7, PL-25-406 Kielce, PolandJan Kochanowski UniversityKielcePoland
| | - Adam C. Schneider
- Center for Research and Conservation of Biodiversity, Department of Environmental Biology, Institute of Biology, Jan Kochanowski University, Uniwersytecka 7, PL-25-406 Kielce, PolandJan Kochanowski UniversityKielcePoland
| | - Grzegorz Góralski
- Department of Plant Cytology and Embryology, Institute of Botany, Jagiellonian University, Gronostajowa 9, PL-30-387 Kraków, PolandJagiellonian UniversityKrakówPoland
| | - Dagmara Kwolek
- Department of Plant Cytology and Embryology, Institute of Botany, Jagiellonian University, Gronostajowa 9, PL-30-387 Kraków, PolandJagiellonian UniversityKrakówPoland
| | - Magdalena Denysenko-Bennett
- Department of Plant Cytology and Embryology, Institute of Botany, Jagiellonian University, Gronostajowa 9, PL-30-387 Kraków, PolandJagiellonian UniversityKrakówPoland
| | - Anna Burda
- Department of Plant Cytology and Embryology, Institute of Botany, Jagiellonian University, Gronostajowa 9, PL-30-387 Kraków, PolandJagiellonian UniversityKrakówPoland
| | - Karolina Ruraż
- Center for Research and Conservation of Biodiversity, Department of Environmental Biology, Institute of Biology, Jan Kochanowski University, Uniwersytecka 7, PL-25-406 Kielce, PolandJan Kochanowski UniversityKielcePoland
| | - Andrzej J. Joachimiak
- Department of Plant Cytology and Embryology, Institute of Botany, Jagiellonian University, Gronostajowa 9, PL-30-387 Kraków, PolandJagiellonian UniversityKrakówPoland
| | - Óscar Sánchez Pedraja
- Grupo Botánico Cantábrico, ES-39722 Liérganes (Cantabria), SpainGrupo Botánico CantábricoLiérganesSpain
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Konarska A, Chmielewski P. Taxonomic traits in the microstructure of flowers of parasitic Orobanche picridis with particular emphasis on secretory structures. PROTOPLASMA 2020; 257:299-317. [PMID: 31529247 PMCID: PMC6982642 DOI: 10.1007/s00709-019-01438-3] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/10/2019] [Accepted: 08/28/2019] [Indexed: 06/01/2023]
Abstract
Orobanche picridis is an obligate root parasite devoid of chlorophyll in aboveground organs, which infects various Picris species. Given the high level of phenotypic variability of the species, the considerable limitation of the number of taxonomically relevant traits (mainly in terms of generative elements), and the low morphological variation between species, Orobanche is regarded as one of the taxonomically most problematic genera. This study aimed to analyse the taxonomic traits of O. picridis flowers with the use of stereoscopic and bright-field microscopy as well as fluorescence, scanning, and transmission electron microscopy. The micromorphology of sepals, petals, stamens, and pistils was described. For the first time, the anatomy of parasitic Orobanche nectaries and the ultrastructure of nectaries and glandular trichomes were presented. Special attention was paid to the distribution and types of glandular and non-glandular trichomes as well as the types of metabolites contained in these structures. It was demonstrated that the nectary gland was located at the base of the gynoecium and nectar was secreted through modified nectarostomata. The secretory parenchyma cells contained nuclei, large amyloplasts with starch granules, mitochondria, and high content of endoplasmic reticulum profiles. Nectar was transported via symplastic and apoplastic routes. The results of histochemical assays and fluorescence tests revealed the presence of four groups of metabolites, i.e. polyphenols (tannins, flavonoids), lipids (acidic and neutral lipids, essential oil, sesquiterpenes, steroids), polysaccharides (acidic and neutral polysaccharides), and alkaloids, in the trichomes located on perianth elements and stamens.
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Affiliation(s)
- Agata Konarska
- Department of Botany and Plant Physiology, Faculty of Horticulture and Landscape Architecture, University of Life Sciences in Lublin, Akademicka 15, 20-950, Lublin, Poland.
| | - Piotr Chmielewski
- Zamość Wildlife Association, Partyzantów 74/59, 22-400, Zamość, Poland
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Li X, Jang TS, Temsch EM, Kato H, Takayama K, Schneeweiss GM. Molecular and karyological data confirm that the enigmatic genus Platypholis from Bonin-Islands (SE Japan) is phylogenetically nested within Orobanche (Orobanchaceae). JOURNAL OF PLANT RESEARCH 2017; 130:273-280. [PMID: 28004281 PMCID: PMC5318490 DOI: 10.1007/s10265-016-0888-y] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2016] [Accepted: 10/26/2016] [Indexed: 05/17/2023]
Abstract
Molecular phylogenetic studies have greatly improved our understanding of phylogenetic relationships of non-photosynthetic parasitic broomrapes (Orobanche and related genera, Orobanchaceae), but a few genera have remained unstudied. One of those is Platypholis, whose sole species, Platypholis boninsimae, is restricted to the Bonin-Islands (Ogasawara Islands) about 1000 km southeast of Japan. Based on overall morphological similarity, Platypholis has been merged with Orobanche, but this hypothesis has never been tested with molecular data. Employing maximum likelihood and Bayesian analyses on a family-wide data set (two plastid markers, matK and rps2, and three nuclear markers, ITS, phyA and phyB) as well as on an ITS data set focusing on Orobanche s. str., it is shown that P. boninsimae Maxim. is phylogenetically closely linked to or even nested within Orobanche s. str. This position is supported both by morphological evidence and by the newly obtained chromosome number of 2n = 38, which is characteristic for the genus Orobanche s. str.
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Affiliation(s)
- Xi Li
- Department of Botany and Biodiversity Research, University of Vienna, Rennweg 14, 1030, Vienna, Austria
| | - Tae-Soo Jang
- Department of Botany and Biodiversity Research, University of Vienna, Rennweg 14, 1030, Vienna, Austria
| | - Eva M Temsch
- Department of Botany and Biodiversity Research, University of Vienna, Rennweg 14, 1030, Vienna, Austria
| | - Hidetoshi Kato
- Makino Herbarium, Tokyo Metropolitan University, 1-1 Minami-Ohsawa, Hachioji-shi, Tokyo, 192-0397, Japan
| | - Koji Takayama
- Museum of Natural and Environmental History, Shizuoka, 5762 Oya, Suruga-ku, Shizuoka-shi, Shizuoka, 422-8017, Japan
| | - Gerald M Schneeweiss
- Department of Botany and Biodiversity Research, University of Vienna, Rennweg 14, 1030, Vienna, Austria.
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Tóth P, Undas AK, Verstappen F, Bouwmeester H. Floral Volatiles in Parasitic Plants of the Orobanchaceae. Ecological and Taxonomic Implications. FRONTIERS IN PLANT SCIENCE 2016; 7:312. [PMID: 27014329 PMCID: PMC4791402 DOI: 10.3389/fpls.2016.00312] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/27/2015] [Accepted: 02/29/2016] [Indexed: 05/11/2023]
Abstract
The holoparasitic broomrapes, Orobanche spp. and Phelipanche spp. (Orobanchaceae), are root parasites that completely depend on a host plant for survival and reproduction. There is considerable controversy on the taxonomy of this biologically and agronomically important family. Flowers of over 25 parasitic Orobanchaceae and a number of close, parasitic and non-parasitic, relatives emitted a complex blend of volatile organic compounds (VOCs), consisting of over 130 VOCs per species. Floral VOC blend-based phylogeny supported the known taxonomy in internal taxonomic grouping of genus and eliminated the uncertainty in some taxonomical groups. Moreover, phylogenetic analysis suggested separation of the broomrapes into two main groups parasitizing annual and perennial hosts, and for the annual hosts, into weedy and non-weedy broomrapes. We conclude that floral VOCs are a significant tool in species identification and possibly even in defining new species and can help to improve controversial taxonomy in the Orobanchaceae.
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Affiliation(s)
- Peter Tóth
- Laboratory of Plant Physiology, Wageningen University and Research CentreWageningen, Netherlands
- Department of Plant Protection, Slovak University of Agriculture in NitraNitra, Slovakia
| | - Anna K. Undas
- Laboratory of Plant Physiology, Wageningen University and Research CentreWageningen, Netherlands
- RIKILT, Wageningen University and Research CentreWageningen, Netherlands
| | - Francel Verstappen
- Laboratory of Plant Physiology, Wageningen University and Research CentreWageningen, Netherlands
| | - Harro Bouwmeester
- Laboratory of Plant Physiology, Wageningen University and Research CentreWageningen, Netherlands
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How many taxa? Spatiotemporal evolution and taxonomy of Amphoricarpos (Asteraceae, Carduoideae) on the Balkan Peninsula. ORG DIVERS EVOL 2015. [DOI: 10.1007/s13127-015-0218-6] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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