Artificial selection for odor-guided behavior in Drosophila reveals changes in food consumption

Arthropod repellent interactions with olfactory receptors and ionotropic receptors analyzed by molecular modeling

The main insect chemoreceptors are olfactory receptors (ORs), gustatory receptors (GRs) and ionotropic receptors (IRs). The odorant binding sites of many insect ORs appear to be occluded and inaccessible from the surface of the receptor protein, based on the three-dimensional structure of OR5 from the jumping bristletail Machilis hrabei (MhraOR5) and a survey of a sample of vinegar fly (Drosophila melanogaster) OR structures obtained from artificial intellegence (A.I.) modeling. Molecular dynamics simulations revealed that the occluded site can become accessible through tunnels that transiently open and close. The present study extends this analysis to examine seventeen ORs and one GR docking with ligands that have known valence: nine that signal attraction and nine that signal aversion. All but one of the receptors displayed occluded ligand binding sites analogous to MhraOR5, and docking software predicted the known attractant and repellent ligands will bind to the occluded sites. Docking of the repellent DEET was examined, and more than half of the OR ligand sites were predicted to bind DEET, including receptors that signal aversion as well as those that signal attraction. However, DEET may not actually have access to all the attractant binding sites. The larger size and lower flexibility of repellent molecules may restrict their passage through the tunnel bottlenecks, which could act as filters to select access to the ligand binding sites. In contrast to ORs and GRs, the IR ligand binding site is in an extracellular domain known to undergo a large conformational change from an open to a closed state. A.I. models of two D. melanogaster IRs of known valence and two blacklegged tick (Ixodes scapularis) IRs having unknown ligands were computationally tested for attractant and repellent binding. The ligand-binding sites in the closed state appear inaccessible to the protein surface, so attractants and repellents must bind initially at an accessible site in the open state before triggering the conformational change. In some IRs, repellent binding sites were identified at exterior sites adjacent to the ligand-binding site. These may be allosteric sites that, when occupied by repellents, can stabilize the open state of an attractant IR, or stabilize the closed state of an IR in the absence of its activating ligand. The model of D. melanogaster IR64a suggests a possible molecular mechanism for the activation of this IR by H+. The amino acids involved in this proposed mechanism are conserved in IR64a from several Dipteran pest species and disease vectors, potentially offering a route to discovery of new repellents that act via the allosteric site.

Nonlinear expression patterns and multiple shifts in gene network interactions underlie robust phenotypic change in Drosophila melanogaster selected for night sleep duration

All but the simplest phenotypes are believed to result from interactions between two or more genes forming complex networks of gene regulation. Sleep is a complex trait known to depend on the system of feedback loops of the circadian clock, and on many other genes; however, the main components regulating the phenotype and how they interact remain an unsolved puzzle. Genomic and transcriptomic data may well provide part of the answer, but a full account requires a suitable quantitative framework. Here we conducted an artificial selection experiment for sleep duration with RNA-seq data acquired each generation. The phenotypic results are robust across replicates and previous experiments, and the transcription data provides a high-resolution, time-course data set for the evolution of sleep-related gene expression. In addition to a Hierarchical Generalized Linear Model analysis of differential expression that accounts for experimental replicates we develop a flexible Gaussian Process model that estimates interactions between genes. 145 gene pairs are found to have interactions that are different from controls. Our method appears to be not only more specific than standard correlation metrics but also more sensitive, finding correlations not significant by other methods. Statistical predictions were compared to experimental data from public databases on gene interactions. Mutations of candidate genes implicated by our results affected night sleep, and gene expression profiles largely met predicted gene-gene interactions.

Developing Lines of Queensland Fruit Flies with Different Levels of Response to a Kairomone Lure

Simple Summary

Queensland fruit fly (Q-fly) is widely recognized as one of the world’s worst economic pests of fruit. In this project, a series of artificial selection experiments were conducted to develop lines of Q-fly with different levels of response to the male-specific lure Cue-lure^® (CL) and to assess the heritability of this particular trait. Although lines of high and low responsive males to Cl were successfully developed through five cycles of artificial selection, the response to CL did not completely disappear. I have demonstrated that relaxing artificial selection results in the loss of 35–46% of the selection response after a further two generations.

Abstract

The Queensland fruit fly (Q-fly), Bactrocera tryoni (Froggatt) is a serious horticultural pest in Australia because it is highly invasive and destructive. Among all pest management practices, sterile insect techniques (SIT) and male annihilation techniques (MAT) are important control options for many tephritid fruit fly pests, including Q-fly. However, simultaneous applications of MAT and SIT require the wild males to be responsive to a lure while the released sterile males remain largely unresponsive. In this study, a series of artificial selection experiments was conducted to develop lines of Q-fly with different levels of response to the male-specific lure Cue-lure^® (CL). After only five cycles of artificial selections, lines of high responsiveness (HR) and low responsiveness (LR) males diverging significantly in their response to the lure were developed. In the field cage experiment, the number of trapped males in fruit fly traps was significantly lower in the LR line than both the HR line and the control which supports the laboratory results. However, when artificial selection was stopped at F5 and retested after two generations, the number of unresponsive males dropped drastically compared to the rate of response of wild flies. Because the selection can be conducted only on males, it would be difficult to eliminate the dominant responsive alleles in the system without continuous selection.

Behavioral and Transcriptional Response to Selection for Olfactory Behavior in Drosophila

The detection, discrimination, and behavioral responses to chemical cues in the environment can have marked effects on organismal survival and reproduction, eliciting attractive or aversive behavior. To gain insight into mechanisms mediating this hedonic valence, we applied thirty generations of divergent artificial selection for Drosophila melanogaster olfactory behavior. We independently selected for positive and negative behavioral responses to two ecologically relevant chemical compounds: 2,3-butanedione and cyclohexanone. We also tested the correlated responses to selection by testing behavioral responses to other odorants and life history traits. Measurements of behavioral responses of the selected lines and unselected controls to additional odorants showed that the mechanisms underlying responses to these odorants are, in some cases, differentially affected by selection regime and generalization of the response to other odorants was only detected in the 2,3-butanedione selection lines. Food consumption and lifespan varied with selection regime and, at times, sex. An analysis of gene expression of both selection regimes identified multiple differentially expressed genes. New genes and genes previously identified in mediating olfactory behavior were identified. In particular, we found functional enrichment of several gene ontology terms, including cell-cell adhesion and sulfur compound metabolic process, the latter including genes belonging to the glutathione S-transferase family. These findings highlight a potential role for glutathione S-transferases in the evolution of hedonic valence to ecologically relevant volatile compounds and set the stage for a detailed investigation into mechanisms by which these genes mediate attraction and aversion.

Host Preference and Olfaction in Drosophila mojavensis

Many organisms live in complex environments that vary geographically in resource availability. This environmental heterogeneity can lead to changes within species in their phenotypic traits. For example, in many herbivorous insects, variation in host plant availability has been shown to influence insect host preference behavior. This behavior can be mediated in part through the insect olfactory system and the odor-evoked responses of olfactory sensory neurons (OSNs), which are in turn mediated by their corresponding odorant receptor genes. The desert dwelling fly Drosophila mojavensis is a model species for understanding the mechanisms underlying host preference in a heterogeneous environment. Depending on geographic region, one to multiple host plant species are available. Here, we conducted electrophysiological studies and found variation in responses of ORNs to host plant volatiles both within and between 2 populations-particularly to the odorant 4-methylphenol. Flies from select localities within each population were found to lack a response to 4-methylphenol. Experiments then assessed the extent to which these electrophysiological differences were associated with differences in several odor-mediated behavioral responses. No association between the presence/absence of these odor-evoked responses and short range olfactory behavior or oviposition behavior was observed. However, differences in odor-induced feeding behavior in response to 4-methylphenol were found. Localities that exhibit an odor-evoked response to the odorant had increased feeding behavior in the presence of the odorant. This study sets the stage for future work examining the functional genetics underlying variation in odor perception.

Evidence of nanoemulsion as an effective control measure for fruit flies Drosophila melanogaster

Pesticide resistance is a common concern. It exerts close association with economic and health associated problems in various plants and other organisms. Several approaches have been trialled for attracting and trapping the insects and flies that are acting as vectors for transmission of communicable diseases. Although Drosophila melanogaster (fruit flies) is not an agricultural pest, its presence in consumer dwelling areas is an objection to human, as it indicates signs of an unhealthy environment or products. The current study focuses on the development of nanoemulsion with synthetic attractants and entrapping in sticky glue formulation that could provide prolonged effect for attracting and trapping the fruit flies. The results of our study showed the efficient attractive ability of exposed nanoemulsion (A3E1T) containing amyl acetate, ammonia, ethanol and Tween 80 compared to that of control. While the sex-based effect was not very prominent, the nanoemulsion showed a higher relative response index to the flies and increased activity even during their siesta time. Therefore, the nanoemulsion-based approach could be identified as one of the promising lines of attack and a suitable alternative for the existing fruit fly control measures. The present study is the first of its kind in reporting the ability of nanoemulsion formulation to attract and influence the activity of fruit flies D. melanogaster, up to our best of knowledge.