1
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Di J, Li Y, Zhang Y, Goh KL, Zheng M. Enzymatic synthesis of antioxidant peptides with controllable and adjustable molecular weights using magnetically recyclable immobilized Alcalase. Int J Biol Macromol 2025; 306:141473. [PMID: 40020844 DOI: 10.1016/j.ijbiomac.2025.141473] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2024] [Revised: 01/24/2025] [Accepted: 02/24/2025] [Indexed: 03/03/2025]
Abstract
Enzymatic hydrolysis of proteins to obtain bioactive peptides is increasingly attractive, but the poor stability and low reusability of enzymes remain unsolved. Here, the magnetically recyclable immobilized Alcalase (Alcalase@SGO-PEGA) was constructed by immobilizing the free protease of Alcalase to the superparamagnetic graphene oxide (SGO) whose surface was modified with polyethylene glycol diamine (PEGA). The results indicate that Alcalase@SGO-PEGA significantly improved the thermostability and pH tolerance of Alcalase, withstanding temperatures up to 70 °C and pH levels up to 12. Additionally, Alcalase@SGO-PEGA with a saturation magnetizations (Ms) of 20.64 emu/g allowed for efficient recovery using external magnetic fields, and its catalytic stability was demonstrated by retaining 50 % of its initial activity after seven cycles of reuse. Using Alcalase@SGO-PEGA for the enzymatic hydrolysis of soy protein isolate, casein, bovine, serum protein, β-lactoglobulin, sesame protein and flaxseed, bioactive peptides with different molecular weights were obtained by adjusting the hydrolysis temperature and time. Additionally, the antioxidative capacity of the bioactive peptides was confirmed by their ABTS+ free radicals scavenging rate and Fe2+ chelating activity. This paper presents a novel, sustainable strategy for obtaining antioxidant peptides with adjustable molecular weights using magnetically recyclable immobilized Alcalase, advancing its application and promoting cleaner protein processing.
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Affiliation(s)
- Junhua Di
- Oil Crops Research Institute, Chinese Academy of Agricultural Sciences, Hubei Key Laboratory of Lipid Chemistry and Nutrition, Hubei Hongshan Laboratory, Key Laboratory of Oilseeds Processing, Ministry of Agriculture, Wuhan 430062, China
| | - Yang Li
- Oil Crops Research Institute, Chinese Academy of Agricultural Sciences, Hubei Key Laboratory of Lipid Chemistry and Nutrition, Hubei Hongshan Laboratory, Key Laboratory of Oilseeds Processing, Ministry of Agriculture, Wuhan 430062, China
| | - Yi Zhang
- Oil Crops Research Institute, Chinese Academy of Agricultural Sciences, Hubei Key Laboratory of Lipid Chemistry and Nutrition, Hubei Hongshan Laboratory, Key Laboratory of Oilseeds Processing, Ministry of Agriculture, Wuhan 430062, China.
| | - Kheng-Lim Goh
- Newcastle University in Singapore, 567739, Republic of Singapore
| | - Mingming Zheng
- Oil Crops Research Institute, Chinese Academy of Agricultural Sciences, Hubei Key Laboratory of Lipid Chemistry and Nutrition, Hubei Hongshan Laboratory, Key Laboratory of Oilseeds Processing, Ministry of Agriculture, Wuhan 430062, China.
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2
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Wu T, Sun J, Bai W. Effects of black soybean peel anthocyanins on the structural and functional properties of wheat gluten. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2025; 105:3219-3228. [PMID: 39707799 DOI: 10.1002/jsfa.14080] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/09/2024] [Revised: 11/13/2024] [Accepted: 12/02/2024] [Indexed: 12/23/2024]
Abstract
BACKGROUND Wheat gluten (WG) is a crucial cereal protein commonly utilized in the food, biological and pharmaceutical industries. However, WG is poorly soluble in water, resulting in poor functional properties, which restrict its application in the food industry. As a result, there is an urgent need for improving the properties of WG. RESULTS This study was conducted to examine the functional properties of WG after binding with black soybean peel anthocyanin extract (BAE). Results showed that BAE enhanced the solubility, water-holding and antioxidant capacity, foaming properties and emulsifying activity of WG, while decreasing the emulsion stability. The degree of hydrolysis of WG and retention rate of BAE became higher in the digested WG-BAE complex than in the control groups. Additionally, an analysis was conducted on the mechanism of interaction between cyanidin-3-O-glucoside (C3G) and WG/gliadin (Gli)/glutenin (Glu). The secondary structure of WG/Gli/Glu was altered after adding C3G. C3G had high affinity for WG/Gli/Glu since their binding constants were greater than 104 L mol-1. The primary binding forces between C3G and WG/Gli were hydrophobic interactions, whereas the main interaction forces between C3G and Glu were hydrogen bonding and van der Waals forces. Moreover, C3G increased the thermal stability and changed the network structure of WG/Gli/Glu. CONCLUSION This study revealed that BAE effectively enhanced a range of functional properties of WG. The interaction between WG and BAE also improved the bioavailability and nutritional value of them. Furthermore, the interaction mode between BAE and WG was investigated. These findings lay a foundation for utilizing gluten-anthocyanins in the food sector. © 2024 Society of Chemical Industry.
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Affiliation(s)
- Tongyun Wu
- School of Chemical Engineering and Light Industry, Guangdong Provincial Key Laboratory of Plant Resources Biorefinery, Guangdong University of Technology, Guangzhou, China
| | - Jianxia Sun
- School of Chemical Engineering and Light Industry, Guangdong Provincial Key Laboratory of Plant Resources Biorefinery, Guangdong University of Technology, Guangzhou, China
| | - Weibin Bai
- Department of Food Science and Engineering, Institute of Food Safety and Nutrition, Jinan University, Guangzhou, China
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3
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Mukherjee S, Mukherjee A, Bytesnikova Z, Ashrafi AM, Richtera L, Adam V. 2D graphene-based advanced nanoarchitectonics for electrochemical biosensors: Applications in cancer biomarker detection. Biosens Bioelectron 2024; 250:116050. [PMID: 38301543 DOI: 10.1016/j.bios.2024.116050] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2023] [Revised: 01/01/2024] [Accepted: 01/17/2024] [Indexed: 02/03/2024]
Abstract
Low-cost, rapid, and easy-to-use biosensors for various cancer biomarkers are of utmost importance in detecting cancer biomarkers for early-stage metastasis control and efficient diagnosis. The molecular complexity of cancer biomarkers is overwhelming, thus, the repeatability and reproducibility of measurements by biosensors are critical factors. Electrochemical biosensors are attractive alternatives in cancer diagnosis due to their low cost, simple operation, and promising analytical figures of merit. Recently graphene-derived nanostructures have been used extensively for the fabrication of electrochemical biosensors because of their unique physicochemical properties, including the high electrical conductivity, adsorption capacity, low cost and ease of mass production, presence of oxygen-containing functional groups that facilitate the bioreceptor immobilization, increased flexibility and mechanical strength, low cellular toxicity. Indeed, these properties make them advantageous compared to other alternatives. However, some drawbacks must be overcome to extend their use, such as poor and uncontrollable deposition on the substrate due to the low dispersity of some graphene materials and irreproducibility of the results because of the differences in various batches of the produced graphene materials. This review has documented the most recently developed strategies for electrochemical sensor fabrication. It differs in the categorization method compared to published works to draw greater attention to the wide opportunities of graphene nanomaterials for biological applications. Limitations and future scopes are discussed to advance the integration of novel technologies such as artificial intelligence, the internet of medical things, and triboelectric nanogenerators to eventually increase efficacy and efficiency.
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Affiliation(s)
- Soumajit Mukherjee
- Department of Chemistry and Biochemistry, Mendel University in Brno, Zemedelska 1, CZ-613 00, Brno, Czech Republic
| | - Atripan Mukherjee
- Department of Chemistry and Biochemistry, Mendel University in Brno, Zemedelska 1, CZ-613 00, Brno, Czech Republic; ELI Beamlines Facility, The Extreme Light Infrastructure ERIC, Za Radnici 835, 252 41, Dolni Breznany, Czech Republic
| | - Zuzana Bytesnikova
- Department of Chemistry and Biochemistry, Mendel University in Brno, Zemedelska 1, CZ-613 00, Brno, Czech Republic
| | - Amir M Ashrafi
- Department of Chemistry and Biochemistry, Mendel University in Brno, Zemedelska 1, CZ-613 00, Brno, Czech Republic
| | - Lukas Richtera
- Department of Chemistry and Biochemistry, Mendel University in Brno, Zemedelska 1, CZ-613 00, Brno, Czech Republic; Central European Institute of Technology, Brno University of Technology, Purkynova 123, CZ-612 00, Brno, Czech Republic
| | - Vojtech Adam
- Department of Chemistry and Biochemistry, Mendel University in Brno, Zemedelska 1, CZ-613 00, Brno, Czech Republic.
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4
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Sahu S, Kumar L, Das S, Gupta D, Anand R. Ultrasensitive detection of aromatic water pollutants through protein immobilization driven organic electrochemical transistors. Chem Sci 2024; 15:710-719. [PMID: 38179533 PMCID: PMC10762727 DOI: 10.1039/d3sc03509c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2023] [Accepted: 12/03/2023] [Indexed: 01/06/2024] Open
Abstract
Xenobiotic aromatic water pollutants pose an extreme threat to environmental sustainability. Due to the lack of detectable functional groups in these compounds and scarcity of selective bio-recognition scaffolds, easy-to-use sensing strategies capable of on-site detection remain unavailable. Herein, to address this lacune, we entail a strategy that combines biosensor scaffolds with organic electronics to create a compact device for environmental aromatic pollution monitoring. As proof of principle, a sensor module capable of rapid, economic, reliable, and ultrasensitive detection of phenol down to 2 ppb (0.02 μM) was designed wherein biosensing protein MopR was coupled with an organic electrochemical transistor (OECT). For effective interfacing of the sensing scaffold MopR, graphene oxide (GO) nanosheets were optimized as a host immobilization matrix. The MopR-GO immobilized sensor module was subsequently substituted as the gate electrode with PEDOT:PSS serving as an organic semiconductor material. The resulting OECT sensor provided a favourable microenvironment for protein activity, maintaining high specificity. Exclusive phenol detection with minimal loss of sensitivity (<5% error) could be achieved in both complex pollutant mixtures and real environmental samples. This fabrication strategy that amalgamates biological biosensors with organic electronics harnesses the potential to achieve detection of a host of emerging pollutants.
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Affiliation(s)
- Subhankar Sahu
- Department of Chemistry, Indian Institute of Technology Bombay Powai Mumbai 400076 India
| | - Lokesh Kumar
- Department of Metallurgical Engineering and Materials Science, Indian Institute of Technology Bombay Powai Mumbai 400076 India
| | - Sumita Das
- Department of Chemistry, Indian Institute of Technology Bombay Powai Mumbai 400076 India
| | - Dipti Gupta
- Department of Metallurgical Engineering and Materials Science, Indian Institute of Technology Bombay Powai Mumbai 400076 India
| | - Ruchi Anand
- Department of Chemistry, Indian Institute of Technology Bombay Powai Mumbai 400076 India
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5
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Devida JM, Herrera F, Daza Millone MA, Requejo FG, Pallarola D. Electrochemical Fine-Tuning of the Chemoresponsiveness of Langmuir-Blodgett Graphene Oxide Films. ACS OMEGA 2023; 8:27566-27575. [PMID: 37546598 PMCID: PMC10399176 DOI: 10.1021/acsomega.3c03220] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/09/2023] [Accepted: 07/10/2023] [Indexed: 08/08/2023]
Abstract
Graphene oxide has been widely deployed in electrical sensors for monitoring physical, chemical, and biological processes. The presence of abundant oxygen functional groups makes it an ideal substrate for integrating biological functional units to assemblies. However, the introduction of this type of defects on the surface of graphene has a deleterious effect on its electrical properties. Therefore, adjusting the surface chemistry of graphene oxide is of utmost relevance for addressing the immobilization of biomolecules, while preserving its electrochemical integrity. Herein, we describe the direct immobilization of glucose oxidase onto graphene oxide-based electrodes prepared by Langmuir-Blodgett assembly. Electrochemical reduction of graphene oxide allowed to control its surface chemistry and, by this, regulate the nature and density of binding sites for the enzyme and the overall responsiveness of the Langmuir-Blodgett biofilm. X-ray photoelectron spectroscopy, surface plasmon resonance, and electrochemical measurements were used to characterize the compositional and functional features of these biointerfaces. Covalent binding between amine groups on glucose oxidase and epoxy and carbonyl groups on the surface of graphene oxide was successfully used to build up stable and active enzymatic assemblies. This approach constitutes a simple, quick, and efficient route to locally address functional proteins at interfaces without the need for additives or complex modifiers to direct the adsorption process.
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Affiliation(s)
- Juan M. Devida
- Instituto
de Investigaciones Fisicoquímicas Teóricas y Aplicadas
(INIFTA), Universidad Nacional de La Plata,
CONICET, CC 16 Suc. 4, La Plata 1900, Argentina
| | - Facundo Herrera
- Instituto
de Investigaciones Fisicoquímicas Teóricas y Aplicadas
(INIFTA), Universidad Nacional de La Plata,
CONICET, CC 16 Suc. 4, La Plata 1900, Argentina
| | - M. Antonieta Daza Millone
- Instituto
de Investigaciones Fisicoquímicas Teóricas y Aplicadas
(INIFTA), Universidad Nacional de La Plata,
CONICET, CC 16 Suc. 4, La Plata 1900, Argentina
| | - Félix G. Requejo
- Instituto
de Investigaciones Fisicoquímicas Teóricas y Aplicadas
(INIFTA), Universidad Nacional de La Plata,
CONICET, CC 16 Suc. 4, La Plata 1900, Argentina
| | - Diego Pallarola
- Instituto
de Nanosistemas, Universidad Nacional de
General San Martín, Av. 25 de Mayo y Francia, San Martín 1650, Argentina
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6
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Al-Sakkaf MK, Basfer I, Iddrisu M, Bahadi SA, Nasser MS, Abussaud B, Drmosh QA, Onaizi SA. An Up-to-Date Review on the Remediation of Dyes and Phenolic Compounds from Wastewaters Using Enzymes Immobilized on Emerging and Nanostructured Materials: Promises and Challenges. NANOMATERIALS (BASEL, SWITZERLAND) 2023; 13:2152. [PMID: 37570470 PMCID: PMC10420689 DOI: 10.3390/nano13152152] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2023] [Revised: 07/13/2023] [Accepted: 07/17/2023] [Indexed: 08/13/2023]
Abstract
Addressing the critical issue of water pollution, this review article emphasizes the need to remove hazardous dyes and phenolic compounds from wastewater. These pollutants pose severe risks due to their toxic, mutagenic, and carcinogenic properties. The study explores various techniques for the remediation of organic contaminants from wastewater, including an enzymatic approach. A significant challenge in enzymatic wastewater treatment is the loss of enzyme activity and difficulty in recovery post-treatment. To mitigate these issues, this review examines the strategy of immobilizing enzymes on newly developed nanostructured materials like graphene, carbon nanotubes (CNTs), and metal-organic frameworks (MOFs). These materials offer high surface areas, excellent porosity, and ample anchoring sites for effective enzyme immobilization. The review evaluates recent research on enzyme immobilization on these supports and their applications in biocatalytic nanoparticles. It also analyzes the impact of operational factors (e.g., time, pH, and temperature) on dye and phenolic compound removal from wastewater using these enzymes. Despite promising outcomes, this review acknowledges the challenges for large-scale implementation and offers recommendations for future research to tackle these obstacles. This review concludes by suggesting that enzyme immobilization on these emerging materials could present a sustainable, environmentally friendly solution to the escalating water pollution crisis.
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Affiliation(s)
- Mohammed K. Al-Sakkaf
- Department of Chemical Engineering, King Fahd University of Petroleum and Minerals, Dhahran 31261, Saudi Arabia
| | - Ibrahim Basfer
- Department of Chemical Engineering, King Fahd University of Petroleum and Minerals, Dhahran 31261, Saudi Arabia
| | - Mustapha Iddrisu
- Department of Chemical Engineering, King Fahd University of Petroleum and Minerals, Dhahran 31261, Saudi Arabia
| | - Salem A. Bahadi
- Department of Chemical Engineering, King Fahd University of Petroleum and Minerals, Dhahran 31261, Saudi Arabia
| | - Mustafa S. Nasser
- Gas Processing Center, College of Engineering, Qatar University, Doha 2713, Qatar
| | - Basim Abussaud
- Department of Chemical Engineering, King Fahd University of Petroleum and Minerals, Dhahran 31261, Saudi Arabia
| | - Qasem A. Drmosh
- Department of Materials Science and Engineering, King Fahd University of Petroleum and Minerals, Dhahran 31261, Saudi Arabia
- Interdisciplinary Research Center for Hydrogen and Energy Storage, King Fahd University of Petroleum and Minerals, Dhahran 31261, Saudi Arabia
| | - Sagheer A. Onaizi
- Department of Chemical Engineering, King Fahd University of Petroleum and Minerals, Dhahran 31261, Saudi Arabia
- Interdisciplinary Research Center for Hydrogen and Energy Storage, King Fahd University of Petroleum and Minerals, Dhahran 31261, Saudi Arabia
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7
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Yadav S, Singh Raman AP, Meena H, Goswami AG, Bhawna, Kumar V, Jain P, Kumar G, Sagar M, Rana DK, Bahadur I, Singh P. An Update on Graphene Oxide: Applications and Toxicity. ACS OMEGA 2022; 7:35387-35445. [PMID: 36249372 PMCID: PMC9558614 DOI: 10.1021/acsomega.2c03171] [Citation(s) in RCA: 37] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/21/2022] [Accepted: 08/30/2022] [Indexed: 08/24/2023]
Abstract
Graphene oxide (GO) has attracted much attention in the past few years because of its interesting and promising electrical, thermal, mechanical, and structural properties. These properties can be altered, as GO can be readily functionalized. Brodie synthesized the GO in 1859 by reacting graphite with KClO3 in the presence of fuming HNO3; the reaction took 3-4 days to complete at 333 K. Since then, various schemes have been developed to reduce the reaction time, increase the yield, and minimize the release of toxic byproducts (NO2 and N2O4). The modified Hummers method has been widely accepted to produce GO in bulk. Due to its versatile characteristics, GO has a wide range of applications in different fields like tissue engineering, photocatalysis, catalysis, and biomedical applications. Its porous structure is considered appropriate for tissue and organ regeneration. Various branches of tissue engineering are being extensively explored, such as bone, neural, dentistry, cartilage, and skin tissue engineering. The band gap of GO can be easily tuned, and therefore it has a wide range of photocatalytic applications as well: the degradation of organic contaminants, hydrogen generation, and CO2 reduction, etc. GO could be a potential nanocarrier in drug delivery systems, gene delivery, biological sensing, and antibacterial nanocomposites due to its large surface area and high density, as it is highly functionalized with oxygen-containing functional groups. GO or its composites are found to be toxic to various biological species and as also discussed in this review. It has been observed that superoxide dismutase (SOD) and reactive oxygen species (ROS) levels gradually increase over a period after GO is introduced in the biological systems. Hence, GO at specific concentrations is toxic for various species like earthworms, Chironomus riparius, Zebrafish, etc.
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Affiliation(s)
- Sandeep Yadav
- Department
of Chemistry, Atma Ram Sanatan Dharma College, University of Delhi, Delhi, India
| | | | - Harshvardhan Meena
- Department
of Chemistry, Atma Ram Sanatan Dharma College, University of Delhi, Delhi, India
- Department
of Chemistry, Sri Venkateswara College, University of Delhi, Delhi, India
- Department
of Chemistry, University of Delhi, Delhi, India
| | - Abhay Giri Goswami
- Department
of Chemistry, Atma Ram Sanatan Dharma College, University of Delhi, Delhi, India
| | - Bhawna
- Department
of Chemistry, Atma Ram Sanatan Dharma College, University of Delhi, Delhi, India
- Special
Centre for Nanoscience, Jawaharlal Nehru
University, Delhi, India
| | - Vinod Kumar
- Special
Centre for Nanoscience, Jawaharlal Nehru
University, Delhi, India
| | - Pallavi Jain
- Department
of Chemistry, Faculty of Engineering and Technology, SRM Institute of Science and Technology, NCR Campus, Uttar Pradesh, India
| | - Gyanendra Kumar
- Department
of Chemistry, University of Delhi, Delhi, India
- Swami Shraddhanand
College, University of Delhi, Delhi, India
| | - Mansi Sagar
- Department
of Chemistry, University of Delhi, Delhi, India
| | - Devendra Kumar Rana
- Department
of Physics, Atma Ram Sanatan Dharma College, University of Delhi, Delhi, India
| | - Indra Bahadur
- Department
of Chemistry, Faculty of Natural and Agricultural Sciences, North-West University, Mmabatho, South Africa
| | - Prashant Singh
- Department
of Chemistry, Atma Ram Sanatan Dharma College, University of Delhi, Delhi, India
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8
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Ekal NS, Patil R, Ranjan N, Bahadur P, Tiwari S. Oxidation state of graphene oxide nanosheets drives their interaction with proteins: A case of bovine serum albumin. Colloids Surf B Biointerfaces 2022; 212:112367. [PMID: 35114436 DOI: 10.1016/j.colsurfb.2022.112367] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2021] [Revised: 01/09/2022] [Accepted: 01/23/2022] [Indexed: 02/08/2023]
Abstract
In the present study, we explored the interaction of bovine serum albumin (BSA) with oxidized graphene oxide (GO) nanosheets. Nanosheets, synthesized with 4, 6, 8, 10 and 12 wt equivalents of KMnO4 as oxidant, were coded as GO-4, GO-6, GO-8, GO-10 and GO-12, respectively. After incubating sheets with a fixed concentration of BSA at room temperature, interactions were monitored with time. The analysis is based on UV-vis spectroscopy, fluorescence quenching, dynamic light scattering (DLS), small angle neutron scattering (SANS), Fourier transform infrared (FTIR) spectroscopy and circular dichroism (CD) techniques. Binding of BSA over sheets was recorded in the following order; GO-04 >> GO-06 > GO-08 > GO-10 ≈ GO-12. Our observations suggest that these interactions are largely regulated by the availability of pure graphitic domains and density of oxygen functionalities on sheet surface. This led us to the conclusion that GO-protein interactions can be minimized by modulating the extent of sheet oxidation. Moreover, we show that adsorption of proteins as colloidal aggregates contributes to improved biosafety of sheets. The protein molecule did not exhibit depletive changes in its conformation. However, from the viewpoint of drug delivery applications, density of oxygen groups must be optimized for maximizing the loading efficiency of oxidized sheets.
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Affiliation(s)
- Neha S Ekal
- Department of Pharmaceutics, National Institute of Pharmaceutical Education and Research (NIPER) - Raebareli, Lucknow 226002, Uttar Pradesh, India
| | - Rahul Patil
- Shree Dhanvantary Pharmacy College, Surat 394110, Gujarat, India
| | - Nihar Ranjan
- Department of Medicinal Chemistry, National Institute of Pharmaceutical Education and Research (NIPER) - Raebareli, Lucknow 226002, Uttar Pradesh, India
| | - Pratap Bahadur
- Department of Chemistry, Veer Narmad South Gujarat University, Surat 395007, Gujarat, India
| | - Sanjay Tiwari
- Department of Pharmaceutics, National Institute of Pharmaceutical Education and Research (NIPER) - Raebareli, Lucknow 226002, Uttar Pradesh, India.
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9
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Chaudhary K, Kumar K, Venkatesu P, Masram DT. Protein immobilization on graphene oxide or reduced graphene oxide surface and their applications: Influence over activity, structural and thermal stability of protein. Adv Colloid Interface Sci 2021; 289:102367. [PMID: 33545443 DOI: 10.1016/j.cis.2021.102367] [Citation(s) in RCA: 46] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2020] [Revised: 01/06/2021] [Accepted: 01/20/2021] [Indexed: 12/20/2022]
Abstract
Due to the essential role of biological macromolecules in our daily life; it is important to control the stability and activity of such macromolecules. Therefore, the most promising route for enhancement in stability and activity is immobilizing proteins on different support materials. Furthermore, large surface area and surface functional groups are the important features that are required for a better support system. These features of graphene oxide (GO) and reduced graphene oxide (RGO) makes them ideal support materials for protein immobilization. Studies show the successful formation of GO/RGO-protein complexes with enhancement in structural/thermal stability due to various interactions at the nano-bio interface and their utilization in various functional applications. The present review focuses on protein immobilization using GO/RGO as solid support materials. Moreover, we also emphasized on basic underlying mechanism and interactions (hydrophilic, hydrophobic, electrostatic, local protein-protein, hydrogen bonding and van der Walls) between protein and GO/RGO which influences structural stability and activity of enzymes/proteins. Furthermore, GO/RGO-protein complexes are utilized in various applications such as biosensors, bioimaging and theranostic agent, targeted drug delivery agents, and nanovectors for drug and protein delivery.
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10
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Ghosh T, Mondal A, Vyas A, Mishra S. A ‘one–tube’ synthesis of a selective fluorescence ‘turn off/on’ DNA probe based on a C-phycocyanin-graphene oxide (CPC-GO) bio composite. Int J Biol Macromol 2020; 163:977-984. [DOI: 10.1016/j.ijbiomac.2020.06.286] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2020] [Revised: 06/26/2020] [Accepted: 06/28/2020] [Indexed: 01/10/2023]
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11
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Tang J, Yan X, Huang W, Engelbrekt C, Duus JØ, Ulstrup J, Xiao X, Zhang J. Bilirubin oxidase oriented on novel type three-dimensional biocathodes with reduced graphene aggregation for biocathode. Biosens Bioelectron 2020; 167:112500. [PMID: 32829175 DOI: 10.1016/j.bios.2020.112500] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2020] [Revised: 08/04/2020] [Accepted: 08/04/2020] [Indexed: 11/29/2022]
Abstract
Aggregation of reduced graphene oxide (RGO) due to π-π stacking is a recurrent problem in graphene-based electrochemistry, decreasing the effective working area and therefore the performance of the RGO electrodes. Dispersing RGO on three-dimensional (3D) carbon paper electrodes is one strategy towards overcoming this challenge, with partial relief aggregation. In this report, we describe the grafting of negatively charged 4-aminobenzoic acid (4-ABA) onto a graphene functionalized carbon paper electrode surface. 4-ABA functionalization induces separation of the RGO layers, at the same time leading to favorable orientation of the blue multi-copper enzyme Myrothecium verrucaria bilirubin oxidase (MvBOD) for direct electron transfer (DET) in the dioxygen reduction reaction (ORR) at neutral pH. Simultaneous electroreduction of graphene oxide to RGO and covalent attachment of 4-ABA are achieved by applying alternating cathodic and anodic electrochemical potential pulses, leading to a high catalytic current density (Δjcat:193 ± 4 μA cm-2) under static conditions. Electrochemically grafted 4-ABA not only leads to a favorable orientation of BOD as validated by fitting a kinetic model to the electrocatalytic data, but also acts to alleviate RGO aggregation as disclosed by scanning electron microscopy, most likely due to the electrostatic repulsion between 4-ABA-grafted graphene layers. With a half-lifetime of 55 h, the bioelectrode also shows the highest operational stability for DET-type MvBOD-based bioelectrodes reported to date. The bioelectrode was finally shown to work well as a biocathode of a membrane-less glucose/O2 enzymatic biofuel cell with a maximum power density of 22 μW cm-2 and an open circuit voltage of 0.51 V.
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Affiliation(s)
- Jing Tang
- Department of Chemistry, Technical University of Denmark, Kongens Lyngby, 2800, Denmark
| | - Xiaomei Yan
- Department of Chemistry, Technical University of Denmark, Kongens Lyngby, 2800, Denmark
| | - Wei Huang
- Department of Chemistry, Technical University of Denmark, Kongens Lyngby, 2800, Denmark
| | - Christian Engelbrekt
- Department of Chemistry, Technical University of Denmark, Kongens Lyngby, 2800, Denmark
| | - Jens Øllgaard Duus
- Department of Chemistry, Technical University of Denmark, Kongens Lyngby, 2800, Denmark
| | - Jens Ulstrup
- Department of Chemistry, Technical University of Denmark, Kongens Lyngby, 2800, Denmark; Kazan National Research Technological University, K. Marx Str., 68, 420015, Kazan, Republic of Tatarstan, Russia
| | - Xinxin Xiao
- Department of Chemistry, Technical University of Denmark, Kongens Lyngby, 2800, Denmark.
| | - Jingdong Zhang
- Department of Chemistry, Technical University of Denmark, Kongens Lyngby, 2800, Denmark.
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12
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Di Costanzo L, Geremia S. Atomic Details of Carbon-Based Nanomolecules Interacting with Proteins. Molecules 2020; 25:E3555. [PMID: 32759758 PMCID: PMC7435792 DOI: 10.3390/molecules25153555] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2020] [Revised: 07/30/2020] [Accepted: 07/31/2020] [Indexed: 12/21/2022] Open
Abstract
Since the discovery of fullerene, carbon-based nanomolecules sparked a wealth of research across biological, medical and material sciences. Understanding the interactions of these materials with biological samples at the atomic level is crucial for improving the applications of nanomolecules and address safety aspects concerning their use in medicine. Protein crystallography provides the interface view between proteins and carbon-based nanomolecules. We review forefront structural studies of nanomolecules interacting with proteins and the mechanism underlying these interactions. We provide a systematic analysis of approaches used to select proteins interacting with carbon-based nanomolecules explored from the worldwide Protein Data Bank (wwPDB) and scientific literature. The analysis of van der Waals interactions from available data provides important aspects of interactions between proteins and nanomolecules with implications on functional consequences. Carbon-based nanomolecules modulate protein surface electrostatic and, by forming ordered clusters, could modify protein quaternary structures. Lessons learned from structural studies are exemplary and will guide new projects for bioimaging tools, tuning of intrinsically disordered proteins, and design assembly of precise hybrid materials.
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Affiliation(s)
- Luigi Di Costanzo
- Department of Agricultural Sciences, University of Naples Federico II, 100, 80055 Portici, Italy
| | - Silvano Geremia
- Centre of Excellence in Biocrystallography, Department of Chemical and Pharmaceutical Sciences, University of Trieste, 34127 Trieste, Italy;
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Lin P, Zhang Y, Yao G, Huo H, Ren H, Wang Y, Wang S, Fang B. Immobilization of formate dehydrogenase on polyethylenimine-grafted graphene oxide with kinetics and stability study. Eng Life Sci 2020; 20:104-111. [PMID: 32874174 PMCID: PMC7447899 DOI: 10.1002/elsc.201900134] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2019] [Revised: 09/29/2019] [Accepted: 11/03/2019] [Indexed: 12/28/2022] Open
Abstract
Graphene oxide-based nanomaterials are promising for enzyme immobilization due to the possibilities of functionalizing surface. Polyethylenimine-grafted graphene oxide was constructed as a novel scaffold for immobilization of formate dehydrogenase. Compared with free formate dehydrogenase and graphene oxide adsorbed formate dehydrogenase, thermostability, storage stability, and reusability of polyethylenimine-grafted graphene oxide-formate dehydrogenase were enhanced. Typically, polyethylenimine-grafted graphene oxide-formate dehydrogenase remained 47.4% activity after eight times' repeat reaction. The immobilized capacity of the polyethylenimine-grafted graphene oxide was 2.4-folds of that of graphene oxide. Morphological and functional analysis of polyethylenimine-grafted graphene oxide-formate dehydrogenase was performed and the assembling mechanism based on multi-level interactions was studied. Consequently, this practical and facile strategy will likely find applications in biosynthesis, biosensing, and biomedical engineering.
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Affiliation(s)
- Peng Lin
- Department of Chemical and Biochemical Engineering, College of Chemistry and Chemical EngineeringXiamen UniversityXiamenP. R. China
| | - Yonghui Zhang
- Department of Chemical and Biochemical Engineering, College of Chemistry and Chemical EngineeringXiamen UniversityXiamenP. R. China
- College of Food and Biology EngineeringJimei UniversityXiamenP. R. China
| | - Guangxiao Yao
- Department of Chemical and Biochemical Engineering, College of Chemistry and Chemical EngineeringXiamen UniversityXiamenP. R. China
| | - Heyu Huo
- Department of Chemical and Biochemical Engineering, College of Chemistry and Chemical EngineeringXiamen UniversityXiamenP. R. China
| | - Hong Ren
- Department of Chemical and Biochemical Engineering, College of Chemistry and Chemical EngineeringXiamen UniversityXiamenP. R. China
| | - Yixuan Wang
- Department of Chemical and Biochemical Engineering, College of Chemistry and Chemical EngineeringXiamen UniversityXiamenP. R. China
| | - Shizhen Wang
- Department of Chemical and Biochemical Engineering, College of Chemistry and Chemical EngineeringXiamen UniversityXiamenP. R. China
- The Key Lab for Synthetic Biotechnology of Xiamen CityXiamen UniversityXiamenFujianP. R. China
| | - Baishan Fang
- Department of Chemical and Biochemical Engineering, College of Chemistry and Chemical EngineeringXiamen UniversityXiamenP. R. China
- The Key Lab for Synthetic Biotechnology of Xiamen CityXiamen UniversityXiamenFujianP. R. China
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Zhang Y, Liu X, Qiu S, Zhang Q, Tang W, Liu H, Guo Y, Ma Y, Guo X, Liu Y. A Flexible Acetylcholinesterase-Modified Graphene for Chiral Pesticide Sensor. J Am Chem Soc 2019; 141:14643-14649. [DOI: 10.1021/jacs.9b05724] [Citation(s) in RCA: 42] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Yunpeng Zhang
- Beijing National Laboratory for Molecular Sciences, Key Laboratory of Organic Solids, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, PR China
- College of Science, China Agricultural University, Beijing 100193, PR China
| | - Xiaotong Liu
- Beijing National Laboratory for Molecular Sciences, Key Laboratory of Organic Solids, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, PR China
- College of Science, China Agricultural University, Beijing 100193, PR China
| | - Shi Qiu
- Department of Electronic Engineering, School of Electronic Information and Electrical Engineering, Shanghai Jiao Tong University, Shanghai 200240, PR China
| | - Qiuqi Zhang
- Department of Electronic Engineering, School of Electronic Information and Electrical Engineering, Shanghai Jiao Tong University, Shanghai 200240, PR China
| | - Wei Tang
- Department of Electronic Engineering, School of Electronic Information and Electrical Engineering, Shanghai Jiao Tong University, Shanghai 200240, PR China
| | - Hongtao Liu
- Beijing National Laboratory for Molecular Sciences, Key Laboratory of Organic Solids, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, PR China
| | - Yunlong Guo
- Beijing National Laboratory for Molecular Sciences, Key Laboratory of Organic Solids, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, PR China
| | - Yongqiang Ma
- College of Science, China Agricultural University, Beijing 100193, PR China
| | - Xiaojun Guo
- Department of Electronic Engineering, School of Electronic Information and Electrical Engineering, Shanghai Jiao Tong University, Shanghai 200240, PR China
| | - Yunqi Liu
- Beijing National Laboratory for Molecular Sciences, Key Laboratory of Organic Solids, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, PR China
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Ebrahim-Habibi MB, Ghobeh M, Mahyari FA, Rafii-Tabar H, Sasanpour P. An investigation into non-covalent functionalization of a single-walled carbon nanotube and a graphene sheet with protein G:A combined experimental and molecular dynamics study. Sci Rep 2019; 9:1273. [PMID: 30718580 PMCID: PMC6362288 DOI: 10.1038/s41598-018-37311-1] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2018] [Accepted: 12/06/2018] [Indexed: 12/15/2022] Open
Abstract
Investigation of non-covalent interaction of hydrophobic surfaces with the protein G (PrG) is necessary due to their frequent utilization in immunosensors and ELISA. It has been confirmed that surfaces, including carbonous-nanostructures (CNS) could orient proteins for a better activation. Herein, PrG interaction with single-walled carbon nanotube (SWCNT) and graphene (Gra) nanostructures was studied by employing experimental and MD simulation techniques. It is confirmed that the PrG could adequately interact with both SWCNT and Gra and therefore fine dispersion for them was achieved in the media. Results indicated that even though SWCNT was loaded with more content of PrG in comparison with the Gra, the adsorption of the PrG on Gra did not induce significant changes in the IgG tendency. Several orientations of the PrG were adopted in the presence of SWCNT or Gra; however, SWCNT could block the PrG-FcR. Moreover, it was confirmed that SWCNT reduced the α-helical structure content in the PrG. Reduction of α-helical structure of the PrG and improper orientation of the PrG-SWCNT could remarkably decrease the PrG tendency to the Fc of the IgG. Importantly, the Gra could appropriately orient the PrG by both exposing the PrG-FcR and also by blocking the fragment of the PrG that had tendency to interact with Fab in IgG.
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Affiliation(s)
- Mohammad-Bagher Ebrahim-Habibi
- Department of Medical Physics and Biomedical Engineering, School of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Maryam Ghobeh
- Department of Biology, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | | | - Hashem Rafii-Tabar
- Department of Medical Physics and Biomedical Engineering, School of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
| | - Pezhman Sasanpour
- Department of Medical Physics and Biomedical Engineering, School of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
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Ehtesabi H, Bagheri Z, Eskandari F, Ahadian MM. Molecular interaction between three-dimensional graphene aerogel and enzyme solution: Effect on enzyme structure and function. J Mol Liq 2018. [DOI: 10.1016/j.molliq.2018.04.116] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Bolibok P, Roszek K, Wiśniewski M. Chemical and Biochemical Approach to Make a Perfect Biocatalytic System on Carbonaceous Matrices. Methods Enzymol 2018; 609:221-245. [PMID: 30244791 DOI: 10.1016/bs.mie.2018.05.015] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Enzymatic processes are widely used in food industry, pharmacy, cosmetic and household chemistry, and medicine. However, the common and efficient application of the biological catalysts is limited by a number of factors that influence enzymes activity. One of the most frequent methods to improve the biocatalysts' properties is immobilization. This chapter presents a recent overview of our attempts to obtain the perfect biocatalytic system. The experimental approach, proposed in this chapter, includes the critical points like: the choice of adequate immobilization method, most suitable carrier, determination of enzyme kinetic parameters, stability, and toxicity of obtained systems. As carbon materials including graphene-derived materials offer unique properties and a plenty of different modifications, these parameters seem to be of decisive importance to understand chemistry of complex systems. Consideration of all the mentioned requirements lead us to the conclusion that graphene oxide could be the best candidate for support in perfect biocatalytic systems.
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Affiliation(s)
- Paulina Bolibok
- Faculty of Chemistry, Physicochemistry of Carbon Materials Research Group, Nicolaus Copernicus University in Toruń, Toruń, Poland
| | - Katarzyna Roszek
- Department of Biochemistry, Faculty of Biology and Environmental Protection, Nicolaus Copernicus University in Toruń, Toruń, Poland
| | - Marek Wiśniewski
- Faculty of Chemistry, Physicochemistry of Carbon Materials Research Group, Nicolaus Copernicus University in Toruń, Toruń, Poland.
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Antón-Millán N, García-Tojal J, Marty-Roda M, Garroni S, Cuesta-López S, Tamayo-Ramos JA. Influence of Three Commercial Graphene Derivatives on the Catalytic Properties of a Lactobacillus plantarum α-l-Rhamnosidase When Used as Immobilization Matrices. ACS APPLIED MATERIALS & INTERFACES 2018; 10:18170-18182. [PMID: 29732878 DOI: 10.1021/acsami.7b18844] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
The modification of carbon nanomaterials with biological molecules paves the way toward their use in biomedical and biotechnological applications, such as next-generation biocatalytic processes, development of biosensors, implantable electronic devices, or drug delivery. In this study, different commercial graphene derivatives, namely, monolayer graphene oxide (GO), graphene oxide nanocolloids (GOCs), and polycarboxylate-functionalized graphene nanoplatelets (GNs), were compared as biomolecule carrier matrices. Detailed spectroscopic analyses showed that GO and GOC were similar in composition and functional group content and very different from GN, whereas divergent morphological characteristics were observed for each nanomaterial through microscopy analyses. The commercial α-l-rhamnosidase RhaB1 from the probiotic bacterium Lactobacillus plantarum, selected as a model biomolecule for its relevant role in the pharma and food industries, was directly immobilized on the different materials. The binding efficiency and biochemical properties of RhaB1-GO, RhaB1-GOC, and RhaB1-GN composites were analyzed. RhaB1-GO and RhaB1-GOC showed high binding efficiency, whereas the enzyme loading on GN, not tested in previous enzyme immobilization studies, was low. The enzyme showed contrasting changes when immobilized on the different material supports. The effect of pH on the activity of the three RhaB1-immobilized versions was similar to that observed for the free enzyme, whereas the activity-temperature profiles and the response to the presence of inhibitors varied significantly between the RhaB1 versions. In addition, the apparent Km for the immobilized and soluble enzymes did not change. Finally, the free RhaB1 and the immobilized enzyme in GOC showed the best storage and reutilization stability, keeping most of their initial activity after 8 weeks of storage at 4 °C and 10 reutilization cycles, respectively. This study shows, for the first time, that distinct commercial graphene derivatives can influence differently the catalytic properties of an enzyme during its immobilization.
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Affiliation(s)
- Noemí Antón-Millán
- Advanced Materials, Nuclear Technology and Applied Bio/Nanotechnology , Consolidated Research Unit UIC-154, University of Burgos , Hospital del Rey s/n, 09001 Burgos , Castilla y León, Spain
| | | | - Marta Marty-Roda
- Advanced Materials, Nuclear Technology and Applied Bio/Nanotechnology , Consolidated Research Unit UIC-154, University of Burgos , Hospital del Rey s/n, 09001 Burgos , Castilla y León, Spain
| | - Sebastiano Garroni
- Advanced Materials, Nuclear Technology and Applied Bio/Nanotechnology , Consolidated Research Unit UIC-154, University of Burgos , Hospital del Rey s/n, 09001 Burgos , Castilla y León, Spain
| | - Santiago Cuesta-López
- Advanced Materials, Nuclear Technology and Applied Bio/Nanotechnology , Consolidated Research Unit UIC-154, University of Burgos , Hospital del Rey s/n, 09001 Burgos , Castilla y León, Spain
| | - Juan Antonio Tamayo-Ramos
- Advanced Materials, Nuclear Technology and Applied Bio/Nanotechnology , Consolidated Research Unit UIC-154, University of Burgos , Hospital del Rey s/n, 09001 Burgos , Castilla y León, Spain
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Tabish TA, Pranjol MZI, Karadag I, Horsell DW, Whatmore JL, Zhang S. Influence of luminescent graphene quantum dots on trypsin activity. Int J Nanomedicine 2018; 13:1525-1538. [PMID: 29588582 PMCID: PMC5858831 DOI: 10.2147/ijn.s155021] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023] Open
Abstract
Background Protein–graphene interactions have the potential to play a pivotal role in the future directions of nanomedicine. These interactions lead to diverse processes such as generation of protein coronas, nano–bio interfaces, particle wrapping, and biocatalytic processes that could determine the ultimate fate of graphene nanocomposites in biologic systems. However, such interactions and their effects on the bioavailability of graphene have not yet been widely appreciated, despite the fact that this is the primary surface in contact with cells. Methods This paper reports on the integrative physiochemical interaction between trypsin and graphene quantum dots (GQDs) to determine their potential biologic identity in enzyme engineering. This interaction was measured by a wide range of analytical methods. Results Definitive binding and modulation of trypsin–GQDs was demonstrated for the first time by use of vibrational spectroscopy and wetting transparency, which revealed that trypsin was absorbed on GQDs’ surface through its cationic and hydrophilic residues. Our findings suggested that trypsin’s active sites were stabilized and protected by the GQDs, which were likely to be responsible for the high bioavailability of GQDs in enzymes. Conclusion Our work demonstrates the efficacy of GQDs as an enzyme modulator with high specificity, and their great application potential in enzyme engineering as well as enzyme-based therapies.
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Affiliation(s)
- Tanveer A Tabish
- College of Engineering, Mathematics and Physical Sciences, University of Exeter, Exeter, UK.,Institute of Biomedical and Clinical Science, University of Exeter Medical School, Exeter, UK
| | - Md Zahidul I Pranjol
- Institute of Biomedical and Clinical Science, University of Exeter Medical School, Exeter, UK
| | - Ilayda Karadag
- College of Engineering, Mathematics and Physical Sciences, University of Exeter, Exeter, UK
| | - David W Horsell
- College of Engineering, Mathematics and Physical Sciences, University of Exeter, Exeter, UK
| | - Jacqueline L Whatmore
- Institute of Biomedical and Clinical Science, University of Exeter Medical School, Exeter, UK
| | - Shaowei Zhang
- College of Engineering, Mathematics and Physical Sciences, University of Exeter, Exeter, UK
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20
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Hetmann A, Wujak M, Bolibok P, Zięba W, Wiśniewski M, Roszek K. Novel biocatalytic systems for maintaining the nucleotide balance based on adenylate kinase immobilized on carbon nanostructures. MATERIALS SCIENCE & ENGINEERING. C, MATERIALS FOR BIOLOGICAL APPLICATIONS 2018; 88:130-139. [PMID: 29636128 DOI: 10.1016/j.msec.2018.03.006] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 08/23/2017] [Revised: 11/28/2017] [Accepted: 03/13/2018] [Indexed: 11/25/2022]
Abstract
In this study graphene oxide (GO), carbon quantum dots (CQD) and carbon nanoonions (CNO) have been characterized and applied for the first time as a matrix for recombinant adenylate kinase (AK, EC 2.7.4.3) immobilization. AK is an enzyme fulfilling a key role in metabolic processes. This phosphotransferase catalyzes the interconversion of adenine nucleotides (ATP, ADP and AMP) and thereby participates in nucleotide homeostasis, monitors a cellular energy charge as well as acts as a component of purinergic signaling system. The AK activity in all obtained biocatalytic systems was higher as compared to the free enzyme. We have found that the immobilization on carbon nanostructures increased both activity and stability of AK. Moreover, the biocatalytic systems consisting of AK immobilized on carbon nanostructures can be easily and efficiently lyophilized without risk of desorption or decrease in the catalytic activity of the investigated enzyme. The positive action of AK-GO biocatalytic system in maintaining the nucleotide balance in in vitro cell culture was proved.
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Affiliation(s)
- Anna Hetmann
- Department of Biochemistry, Faculty of Biology and Environmental Protection, Nicolaus Copernicus University in Toruń, 1 Lwowska St., 87-100 Toruń, Poland.
| | - Magdalena Wujak
- Department of Biochemistry, Faculty of Biology and Environmental Protection, Nicolaus Copernicus University in Toruń, 1 Lwowska St., 87-100 Toruń, Poland
| | - Paulina Bolibok
- Faculty of Chemistry, Physicochemistry of Carbon Materials Research Group, Nicolaus Copernicus University in Toruń, 7 Gagarin St., 87-100 Toruń, Poland
| | - Wojciech Zięba
- Faculty of Chemistry, Physicochemistry of Carbon Materials Research Group, Nicolaus Copernicus University in Toruń, 7 Gagarin St., 87-100 Toruń, Poland
| | - Marek Wiśniewski
- Faculty of Chemistry, Physicochemistry of Carbon Materials Research Group, Nicolaus Copernicus University in Toruń, 7 Gagarin St., 87-100 Toruń, Poland; INVEST-TECH R&D Center, 32-34 Płaska St., 87-100 Toruń, Poland
| | - Katarzyna Roszek
- Department of Biochemistry, Faculty of Biology and Environmental Protection, Nicolaus Copernicus University in Toruń, 1 Lwowska St., 87-100 Toruń, Poland
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Bolibok P, Wiśniewski M, Roszek K, Terzyk AP. Controlling enzymatic activity by immobilization on graphene oxide. THE SCIENCE OF NATURE - NATURWISSENSCHAFTEN 2017; 104:36. [PMID: 28361348 PMCID: PMC5374183 DOI: 10.1007/s00114-017-1459-3] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/23/2016] [Revised: 03/19/2017] [Accepted: 03/22/2017] [Indexed: 12/27/2022]
Abstract
In this study, graphene oxide (GO) has been applied as a matrix for enzyme immobilization. The protein adsorption capacity of GO is much higher than of other large surface area carbonaceous materials. Its structure and physicochemical properties are reported beneficial also for enzymatic activity modifications. The experimental proof was done here that GO-based biocatalytic systems with immobilized catalase are modifiable in terms of catalyzed reaction kinetic constants. It was found that activity and stability of catalase, considered here as model enzyme, closely depend on enzyme/GO ratio. The changes in kinetic parameters can be related to secondary structure alterations. The correlation between enzyme/GO ratio and kinetic and structure parameters is reported for the first time and enables the conscious control of biocatalytic processes and their extended applications. The biological activity of obtained biocatalytic systems was confirmed in vitro by the use of functional test. The addition of immobilized catalase improved the cells' viability after they were exposed to hydrogen peroxide and tert-butyl-hydroperoxide used as source of reactive oxygen species.
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Affiliation(s)
- Paulina Bolibok
- Faculty of Chemistry, Physicochemistry of Carbon Materials Research Group, Nicolaus Copernicus University in Toruń, Gagarin St. 7, 87-100, Toruń, Poland
| | - Marek Wiśniewski
- Faculty of Chemistry, Physicochemistry of Carbon Materials Research Group, Nicolaus Copernicus University in Toruń, Gagarin St. 7, 87-100, Toruń, Poland.
- INVEST-TECH R&D Center, Plaska St. 32-34, 87-100, Toruń, Poland.
| | - Katarzyna Roszek
- Department of Biochemistry, Faculty of Biology and Environment Protection, Nicolaus Copernicus University in Toruń, Gagarin St. 7, 87-100, Toruń, Poland
| | - Artur P Terzyk
- Faculty of Chemistry, Physicochemistry of Carbon Materials Research Group, Nicolaus Copernicus University in Toruń, Gagarin St. 7, 87-100, Toruń, Poland
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Immobilization of bilirubin oxidase on graphene oxide flakes with different negative charge density for oxygen reduction. The effect of GO charge density on enzyme coverage, electron transfer rate and current density. Biosens Bioelectron 2016; 89:384-389. [PMID: 27297188 DOI: 10.1016/j.bios.2016.06.006] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2016] [Revised: 06/03/2016] [Accepted: 06/04/2016] [Indexed: 01/16/2023]
Abstract
Previously we showed that an effective bilirubin oxidase (BOD)-based biocathode using graphene oxide (GO) could be prepared in 2 steps: 1. electrostatic adsorption of BOD on GO; 2. electrochemical reduction of the BOD-GO composite to form a BOD-ErGO (electrochemically reduced GO) film on the electrode. In order to identify an optimal charge density of GO for BOD-ErGO composite preparation, several GO fractions differing in an average flake size and ζ-potential were prepared using centrifugation and consequently employed for BOD-ErGO biocathode preparation. A simple way to express surface charge density of these particular GO nanosheets was developed. The values obtained were then correlated with biocatalytic and electrochemical parameters of the prepared biocathodes, i.e. electrocatalytically active BOD surface coverage (Γ), heterogeneous electron transfer rate (kS) and a maximum biocatalytic current density. The highest bioelectrocatalytic current density of (597±25)μAcm-2 and the highest Γ of (23.6±0.9)pmolcm-2 were obtained on BOD-GO composite having the same moderate negative charge density, but the highest kS of (79.4±4.6)s-1 was observed on BOD-GO composite having different negative charge density. This study is a solid foundation for others to consider the influence of a charge density of GO on direct bioelectrochemistry/bioelectrocatalysis of other redox enzymes applicable for construction of biosensors, bioanodes, biocathodes or biofuel cells.
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