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Davidovich C, Awwad A, Fleker M, Weisblit L, Cytryn E, Blum SE. Complete genome sequence of multi-drug-resistant Salmonella enterica subsp. enterica serovar Typhimurium strain Bnaya isolated from a dairy calf in Israel. Microbiol Resour Announc 2023; 12:e0035123. [PMID: 37787537 PMCID: PMC10586145 DOI: 10.1128/mra.00351-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2023] [Accepted: 08/27/2023] [Indexed: 10/04/2023] Open
Abstract
This manuscript reports the complete genome sequence of a Salmonella enterica subsp. enterica serovar Typhimurium strain (designated "Bnaya"), isolated from a dead dairy calf with severe diarrhea in Israel. The isolate exhibited multi-drug resistance, which is highly unusual in bovine Salmonella spp. in Israel, prompting further investigation.
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Affiliation(s)
- Chagai Davidovich
- Water and Environmental Sciences, Institute of Soil, Agricultural Research Organization, Rishon-Lezion, Israel
- Department of Agroecology and Plant Health, The Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, Israel
| | - Aya Awwad
- Department of Bacteriology and Mycology, Kimron Veterinary Institute, Bet Dagan, Israel
- Department of Animal Sciences, The Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, Israel
| | - Marcelo Fleker
- Department of Bacteriology and Mycology, Kimron Veterinary Institute, Bet Dagan, Israel
| | - Limor Weisblit
- Department of Bacteriology and Mycology, Kimron Veterinary Institute, Bet Dagan, Israel
| | - Eddie Cytryn
- Water and Environmental Sciences, Institute of Soil, Agricultural Research Organization, Rishon-Lezion, Israel
| | - Shlomo E. Blum
- Department of Bacteriology and Mycology, Kimron Veterinary Institute, Bet Dagan, Israel
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Grudlewska-Buda K, Bauza-Kaszewska J, Wiktorczyk-Kapischke N, Budzyńska A, Gospodarek-Komkowska E, Skowron K. Antibiotic Resistance in Selected Emerging Bacterial Foodborne Pathogens-An Issue of Concern? Antibiotics (Basel) 2023; 12:antibiotics12050880. [PMID: 37237783 DOI: 10.3390/antibiotics12050880] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2023] [Revised: 04/30/2023] [Accepted: 05/07/2023] [Indexed: 05/28/2023] Open
Abstract
Antibiotic resistance (AR) and multidrug resistance (MDR) have been confirmed for all major foodborne pathogens: Campylobacter spp., Salmonella spp., Escherichia coli and Listeria monocytogenes. Of great concern to scientists and physicians are also reports of antibiotic-resistant emerging food pathogens-microorganisms that have not previously been linked to food contamination or were considered epidemiologically insignificant. Since the properties of foodborne pathogens are not always sufficiently recognized, the consequences of the infections are often not easily predictable, and the control of their activity is difficult. The bacteria most commonly identified as emerging foodborne pathogens include Aliarcobacter spp., Aeromonas spp., Cronobacter spp., Vibrio spp., Clostridioides difficile, Escherichia coli, Mycobacterium paratuberculosis, Salmonella enterica, Streptocccus suis, Campylobacter jejuni, Helicobacter pylori, Listeria monocytogenes and Yersinia enterocolitica. The results of our analysis confirm antibiotic resistance and multidrug resistance among the mentioned species. Among the antibiotics whose effectiveness is steadily declining due to expanding resistance among bacteria isolated from food are β-lactams, sulfonamides, tetracyclines and fluoroquinolones. Continuous and thorough monitoring of strains isolated from food is necessary to characterize the existing mechanisms of resistance. In our opinion, this review shows the scale of the problem of microbes related to health, which should not be underestimated.
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Affiliation(s)
- Katarzyna Grudlewska-Buda
- Department of Microbiology, Ludwik Rydygier Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Toruń, 85-094 Bydgoszcz, Poland
| | - Justyna Bauza-Kaszewska
- Department of Microbiology and Food Technology, Bydgoszcz University of Science and Technology, 85-029 Bydgoszcz, Poland
| | - Natalia Wiktorczyk-Kapischke
- Department of Microbiology, Ludwik Rydygier Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Toruń, 85-094 Bydgoszcz, Poland
| | - Anna Budzyńska
- Department of Microbiology, Ludwik Rydygier Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Toruń, 85-094 Bydgoszcz, Poland
| | - Eugenia Gospodarek-Komkowska
- Department of Microbiology, Ludwik Rydygier Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Toruń, 85-094 Bydgoszcz, Poland
| | - Krzysztof Skowron
- Department of Microbiology, Ludwik Rydygier Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Toruń, 85-094 Bydgoszcz, Poland
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Sedrakyan AM, Ktsoyan ZA, Arakelova KA, Zakharyan MK, Hovhannisyan AI, Gevorgyan ZU, Mnatsakanyan AA, Kakabadze EG, Makalatia KB, Chanishvili NA, Pirnay JP, Arakelyan AA, Aminov RI. Extended-Spectrum β-Lactamases in Human Isolates of Multidrug-Resistant Non-typhoidal Salmonella enterica. Front Microbiol 2020; 11:592223. [PMID: 33414769 PMCID: PMC7783090 DOI: 10.3389/fmicb.2020.592223] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2020] [Accepted: 12/03/2020] [Indexed: 11/16/2022] Open
Abstract
A total of 291 non-duplicate isolates of non-typhoidal Salmonella (NTS) were collected from the fecal samples of patients with salmonellosis in Armenia and Georgia during 1996–2016. The isolates were tested for resistance to antimicrobials, including extended-spectrum β-lactamases (ESBL). The high prevalence of multidrug-resistance (MDR) and ESBL-producer phenotypes was detected among Salmonella enterica subsp. enterica serovar Typhimurium (S. Typhimurium) isolates collected from patients in Armenia between 1996 and 2016. A total of 36 MDR NTS isolates were subjected to whole genome sequencing (WGS) to determine the genetic background of antimicrobial resistance (AMR) and mobile genetic elements. All ESBL-producing S. Typhimurium isolates belonged to the same sequence type (ST328). The ESBL-producer phenotype was associated with plasmid-encoded CTX-M-5 production. A range of other plasmids was associated with resistance to other antimicrobials, including the MDR phenotype.
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Affiliation(s)
- Anahit M Sedrakyan
- Institute of Molecular Biology, National Academy of Sciences of RA, Yerevan, Armenia
| | - Zhanna A Ktsoyan
- Institute of Molecular Biology, National Academy of Sciences of RA, Yerevan, Armenia
| | - Karine A Arakelova
- Institute of Molecular Biology, National Academy of Sciences of RA, Yerevan, Armenia
| | - Magdalina K Zakharyan
- Institute of Molecular Biology, National Academy of Sciences of RA, Yerevan, Armenia
| | - Alvard I Hovhannisyan
- Institute of Molecular Biology, National Academy of Sciences of RA, Yerevan, Armenia
| | - Zaruhi U Gevorgyan
- Department of Clinical Laboratory Diagnostics, Yerevan State Medical University after M. Heratsi, Yerevan, Armenia
| | | | - Elene G Kakabadze
- George Eliava Institute of Bacteriophages, Microbiology and Virology, Tbilisi, Georgia.,Department of Exact and Natural Sciences, Ivane Javakhishvili Tbilisi State University, Tbilisi, Georgia
| | - Khatuna B Makalatia
- George Eliava Institute of Bacteriophages, Microbiology and Virology, Tbilisi, Georgia.,Department of Exact and Natural Sciences, Ivane Javakhishvili Tbilisi State University, Tbilisi, Georgia
| | - Nina A Chanishvili
- George Eliava Institute of Bacteriophages, Microbiology and Virology, Tbilisi, Georgia
| | | | - Arsen A Arakelyan
- Institute of Molecular Biology, National Academy of Sciences of RA, Yerevan, Armenia
| | - Rustam I Aminov
- The School of Medicine, Medical Sciences and Nutrition, University of Aberdeen, Aberdeen, United Kingdom.,Institute of Fundamental Medicine and Biology, Kazan Federal University, Kazan, Russia
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Zhang X, Guo L, Ma R, Cong L, Wu Z, Wei Y, Xue S, Zheng W, Tang S. Rapid detection of Salmonella with Recombinase Aided Amplification. J Microbiol Methods 2017; 139:202-204. [PMID: 28619662 DOI: 10.1016/j.mimet.2017.06.011] [Citation(s) in RCA: 68] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2017] [Revised: 06/09/2017] [Accepted: 06/10/2017] [Indexed: 10/19/2022]
Abstract
Rapid Salmonella detection using Recombinase Aided Amplification was established. The reaction completes in 20 min at 39°C and can be performed with a portable device. Once further improved, this method should be a great choice for monitoring contamination, such as foodborne Salmonella or for similar purposes.
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Affiliation(s)
- Xiaoping Zhang
- Hangzhou Airport Office of the Zhejiang Entry-Exit Inspection and Quarantine Bureau, Hangzhou, Zhejiang Province, China
| | - Lichuan Guo
- Jiangsu Qitian Bio-Tech Co. Ltd, Wuxi, Jiangsu Province, China
| | - Ranran Ma
- Jiangsu Qitian Bio-Tech Co. Ltd, Wuxi, Jiangsu Province, China
| | - Lijuan Cong
- Airport Industrial Zone B6, Shunyi District, Beijing, China
| | - Zhonghua Wu
- International Travel Healthcare Center, Hangzhou, Zhejiang Province, China
| | - Ying Wei
- Hangzhou Airport Office of the Zhejiang Entry-Exit Inspection and Quarantine Bureau, Hangzhou, Zhejiang Province, China
| | - Shijie Xue
- Hangzhou Airport Office of the Zhejiang Entry-Exit Inspection and Quarantine Bureau, Hangzhou, Zhejiang Province, China
| | - Wei Zheng
- International Travel Healthcare Center, Hangzhou, Zhejiang Province, China
| | - Saijun Tang
- College of Biological Sciences, China Agricultural University, Beijing, China.
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