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Manabe H, Manabe T, Honda Y, Kawade Y, Kambayashi D, Manabe Y, Kudo K. Simple mathematical model for predicting COVID-19 outbreaks in Japan based on epidemic waves with a cyclical trend. BMC Infect Dis 2024; 24:465. [PMID: 38724890 PMCID: PMC11080248 DOI: 10.1186/s12879-024-09354-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2023] [Accepted: 04/26/2024] [Indexed: 05/13/2024] Open
Abstract
BACKGROUND Several models have been used to predict outbreaks during the COVID-19 pandemic, with limited success. We developed a simple mathematical model to accurately predict future epidemic waves. METHODS We used data from the Ministry of Health, Labour and Welfare of Japan for newly confirmed COVID-19 cases. COVID-19 case data were summarized as weekly data, and epidemic waves were visualized and identified. The periodicity of COVID-19 in each prefecture of Japan was confirmed using time-series analysis and the autocorrelation coefficient, which was used to investigate the longer-term pattern of COVID-19 cases. Outcomes using the autocorrelation coefficient were visualized via a correlogram to capture the periodicity of the data. An algorithm for a simple prediction model of the seventh COVID-19 wave in Japan comprised three steps. Step 1: machine learning techniques were used to depict the regression lines for each epidemic wave, denoting the "rising trend line"; Step 2: an exponential function with good fit was identified from data of rising straight lines up to the sixth wave, and the timing of the rise of the seventh wave and speed of its spread were calculated; Step 3: a logistic function was created using the values calculated in Step 2 as coefficients to predict the seventh wave. The accuracy of the model in predicting the seventh wave was confirmed using data up to the sixth wave. RESULTS Up to March 31, 2023, the correlation coefficient value was approximately 0.5, indicating significant periodicity. The spread of COVID-19 in Japan was repeated in a cycle of approximately 140 days. Although there was a slight lag in the starting and peak times in our predicted seventh wave compared with the actual epidemic, our developed prediction model had a fairly high degree of accuracy. CONCLUSION Our newly developed prediction model based on the rising trend line could predict COVID-19 outbreaks up to a few months in advance with high accuracy. The findings of the present study warrant further investigation regarding application to emerging infectious diseases other than COVID-19 in which the epidemic wave has high periodicity.
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Affiliation(s)
- Hiroki Manabe
- Shitennoji University, 3-2-1 Gakuenmae, Habikino City, 583-8501, Osaka, Japan.
| | - Toshie Manabe
- Nagoya City University School of Data Science, Nagoya City, Aichi, Japan
- Nagoya City University Graduate School of Medicine, Nagoya City, Aichi, Japan
| | - Yuki Honda
- Shitennoji University, 3-2-1 Gakuenmae, Habikino City, 583-8501, Osaka, Japan
| | - Yoshihiro Kawade
- Nagoya City University Graduate School of Medicine, Nagoya City, Aichi, Japan
| | - Dan Kambayashi
- Nagoya City University Graduate School of Medicine, Nagoya City, Aichi, Japan
- Showa Pharmaceutical University, Machida, Tokyo, Japan
| | - Yoshiki Manabe
- Tokyo University Graduate School of Engineering, Tokyo, Japan
| | - Koichiro Kudo
- Waseda University Organization Regional and inter-regional Studies, Tokyo, Japan
- Kawakita General Hospital, Tokyo, Japan
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Quiroga BF, Vásquez C, Vicuña MI. Nonlinear time-series forecasts for decision support: short-term demand for ICU beds in Santiago, Chile, during the 2021 COVID-19 pandemic. INTERNATIONAL TRANSACTIONS IN OPERATIONAL RESEARCH : A JOURNAL OF THE INTERNATIONAL FEDERATION OF OPERATIONAL RESEARCH SOCIETIES 2022; 30:ITOR13222. [PMID: 36712286 PMCID: PMC9874731 DOI: 10.1111/itor.13222] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/13/2021] [Revised: 04/22/2022] [Accepted: 09/22/2022] [Indexed: 06/18/2023]
Abstract
In Chile, due to the explosive increase of new Coronavirus disease 2019 (COVID-19) cases during the first part of 2021, the ability of health services to accommodate new incoming cases was jeopardized. It has become necessary to be able to manage intensive care unit (ICU) capacity, and for this purpose, monitoring both the evolution of new cases and the demand for ICU beds has become urgent. This paper presents short-term forecast models for the number of new cases and the number of COVID-19 patients admitted to ICUs in the Metropolitan Region in Chile.
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Affiliation(s)
- Bernardo F. Quiroga
- School of ManagementPontificia Universidad Católica de ChileAv. Vicuña Mackenna 4860MaculSantiagoRM 7820436Chile
| | - Cristián Vásquez
- School of ManagementPontificia Universidad Católica de ChileAv. Vicuña Mackenna 4860MaculSantiagoRM 7820436Chile
| | - M. Ignacia Vicuña
- School of ManagementPontificia Universidad Católica de ChileAv. Vicuña Mackenna 4860MaculSantiagoRM 7820436Chile
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Smith SG, Sinkford JC. Gender equality in the 21st century: Overcoming barriers to women's leadership in global health. J Dent Educ 2022; 86:1144-1173. [PMID: 36165260 DOI: 10.1002/jdd.13059] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2022] [Accepted: 07/13/2022] [Indexed: 11/08/2022]
Abstract
PURPOSE The purpose of this manuscript is to provide an overview of the significant role that women play in providing global health care, barriers encountered to achieving gender equality in global health leadership, and to propose key recommendations for advancing gender equality in global health decision-making through the integration of gender mainstreaming, gender-based analysis, and gender transformative leadership (GTL) approaches. METHOD Data were evaluated to determine the participation rate of women in global health care and social sector roles in comparison to men. Gender equality data from the United Nations, World Health Organization, Organization for Economic Co-operation and Development, International Labour Organization, and other resources were analyzed to assess the impact of the coronavirus disease 2019 pandemic on gender equality with an emphasis on women in global health leadership positions, the health care and social sector, and gender equality measures for girls and women throughout the world. The literature was examined to identify persistent barriers to gender equality in global health leadership positions. Additionally, a review of the literature was conducted to identify key strategies and recommendations for achieving gender equality in global health decision-making; integrating gender mainstreaming; conducting gender-based analysis; and adopting GTL programs, incentives, and policies to advance gender equality in global health organizations. FINDINGS Women represent 70% of the health and social care sector global workforce but only 25% of senior global health leadership roles. Since 2018, there has been a lack of meaningful change in the gender equality policy arenas at global health organizations that has led to significant increases in women serving in global leadership decision-making senior positions. During the pandemic in 2020, there were nearly 100 open vacancies-one-quarter of CEO and board chair positions-at global health organizations, but none were filled by women. Women disproportionately provide caregiving and unpaid care work, and the pandemic has increased this burden with women spending 15 hours a week more on domestic labor than men. A lack of uniform, state-sponsored paid parental leave and support for childcare, eldercare, and caregiving, which is overwhelmingly assumed by women, serve as major barriers to gender parity in global health leadership and the career advancement of women. CONCLUSION The pandemic has adversely impacted women in global health care and social sector roles. During the pandemic, there has been a widening of the gender pay gap, a lack of gains for women in global health leadership positions, an increase in caregiving responsibilities for women, and more women and girls have been pushed back into extreme poverty than men and boys. Globally, there is still resistance to women serving in senior leadership roles, and social and cultural norms, gender stereotypes, and restrictions on women's rights are deeply intertwined with barriers that reinforce gender inequality in global health leadership. To ensure comprehensive human rights and that equitable workforce opportunities are available, the concept of gender equality must be expanded within the global health community to consistently include not only women and girls and men and boys, but also persons who identify as nonbinary and gender nonconforming. Efforts to eliminate remnants of systemic and structural gender discrimination must also incorporate gender mainstreaming, gender-based analysis, and gender transformative approaches to achieve gender equality throughout global health systems and organizations.
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Affiliation(s)
- Sonya G Smith
- Chief Diversity Officer, American Dental Education Association, Washington, DC, USA
| | - Jeanne C Sinkford
- Senior Scholar-in-Residence Emerita, American Dental Education Association, and Professor Emerita and Dean Emerita at Howard University College of Dentistry, Washington, DC, USA
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Wang Y, Zhang Y, Zhang X, Liang H, Li G, Wang X. An intelligent forecast for COVID‐19 based on single and multiple features. INT J INTELL SYST 2022; 37:9339-9356. [PMID: 36247714 PMCID: PMC9539063 DOI: 10.1002/int.22995] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2022] [Revised: 07/28/2022] [Accepted: 08/01/2022] [Indexed: 11/13/2022]
Abstract
It is urgent to identify the development of the Corona Virus Disease 2019 (COVID‐19) in countries around the world. Therefore, visualization is particularly important for monitoring the COVID‐19. In this paper, we visually analyze the real‐time data of COVID‐19, to monitor the trend of COVID‐19 in the form of charts. At present, the COVID‐19 is still spreading. However, in the existing works, the visualization of COVID‐19 data has not established a certain connection between the forecast of the epidemic data and the forecast of the epidemic. To better predict the development trend of the COVID‐19, we establish a logistic growth model to predict the development of the epidemic by using the same data source in the visualization. However, the logistic growth model only has a single feature. To predict the epidemic situation in an all‐round way, we also predict the development trend of the COVID‐19 based on the Susceptible Exposed Infected Removed epidemic model with multiple features. We fit the data predicted by the model to the real COVID‐19 epidemic data. The simulation results show that the predicted epidemic development trend is consistent with the actual epidemic development trend, and our model performs well in predicting the trend of COVID‐19.
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Affiliation(s)
- Yilei Wang
- School of Computer Science Qufu Normal University Rizhao China
| | - Yiting Zhang
- School of Computer Science Qufu Normal University Rizhao China
| | - Xiujuan Zhang
- School of Computer Science Qufu Normal University Rizhao China
| | - Hai Liang
- School of Computer Science Guilin University of Electronic Technology Guilin China
| | - Guangshun Li
- School of Computer Science Qufu Normal University Rizhao China
| | - Xiaoying Wang
- The Smart Hospital R & D Center Third Affiliated Hospital of Sun Yat‐sen University Guangzhou China
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Peng Y, Liu E, Peng S, Chen Q, Li D, Lian D. Using artificial intelligence technology to fight COVID-19: a review. Artif Intell Rev 2022; 55:4941-4977. [PMID: 35002010 PMCID: PMC8720541 DOI: 10.1007/s10462-021-10106-z] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 11/12/2021] [Indexed: 02/10/2023]
Abstract
In late December 2019, a new type of coronavirus was discovered, which was later named severe acute respiratory syndrome coronavirus 2(SARS-CoV-2). Since its discovery, the virus has spread globally, with 2,975,875 deaths as of 15 April 2021, and has had a huge impact on our health systems and economy. How to suppress the continued spread of new coronary pneumonia is the main task of many scientists and researchers. The introduction of artificial intelligence technology has provided a huge contribution to the suppression of the new coronavirus. This article discusses the main application of artificial intelligence technology in the suppression of coronavirus from three major aspects of identification, prediction, and development through a large amount of literature research, and puts forward the current main challenges and possible development directions. The results show that it is an effective measure to combine artificial intelligence technology with a variety of new technologies to predict and identify COVID-19 patients.
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Affiliation(s)
- Yong Peng
- Petroleum Engineering School, Southwest Petroleum University, Chengdu, 610500 China
| | - Enbin Liu
- Petroleum Engineering School, Southwest Petroleum University, Chengdu, 610500 China
| | - Shanbi Peng
- School of Civil Engineering and Geomatics, Southwest Petroleum University, Chengdu, 610500 China
| | - Qikun Chen
- School of Engineering, Cardiff University, Cardiff, CF24 3AA UK
| | - Dangjian Li
- Petroleum Engineering School, Southwest Petroleum University, Chengdu, 610500 China
| | - Dianpeng Lian
- Petroleum Engineering School, Southwest Petroleum University, Chengdu, 610500 China
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Muhaidat J, Albatayneh A, Abdallah R, Papamichael I, Chatziparaskeva G. Predicting COVID-19 future trends for different European countries using Pearson correlation. EURO-MEDITERRANEAN JOURNAL FOR ENVIRONMENTAL INTEGRATION 2022; 7:157-170. [PMID: 35578685 PMCID: PMC9096068 DOI: 10.1007/s41207-022-00307-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/23/2022] [Accepted: 04/21/2022] [Indexed: 05/10/2023]
Abstract
The ability to accurately forecast the number of COVID-19 cases and future case trends would certainly assist governments and various organisations in strategising and preparing for the newly infected cases well in advance. Many predictions have failed to foresee future COVID-19 cases due to the lack of reliable data; however, such data are now widely available for predicting future trends in COVID-19 after more than one and a half years of the pandemic. Also, various countries are closely monitoring other countries that are experiencing a surge in COVID-19 cases in the expectation of similar scenarios, but this does not always produce correct results, as no research has identified specific correlations between different countries in terms of COVID-19 cases. During the past 18 months, many nations have watched countries whose COVID-19 cases have risen sharply, in anticipation of handling the situation themselves. However, this did not provide accurate results, as no research was conducted that compared countries to determine if their COVID-19 case trends were correlated. As official data on COVID-19 cases has become increasingly available, using the Pearson correlation technique to pinpoint the countries that should be closely monitored will help governments plan and prepare for the number of infections that are expected in the future at an early stage. In this study, a simple and real-time prediction of COVID-19 cases incorporating existing variables of coronavirus variants was used to explore the correlation among different European countries in terms of the number of COVID-19 cases officially recorded on a daily basis. Data from selected countries over the past 76 weeks were analysed using a Pearson correlation technique to determine if there were correlations between case trends and geographical position. The correlation coefficient (r) was employed for identifying whether the different countries in Europe were interrelated, with r > 0.85 indicating they were very strongly correlated, 0.85 > r > 0.8 indicating that they were strongly correlated, 0.8 > r > 0.7 indicating that they were moderately correlated, and r < 0.7 indicating that the examined countries were either weakly correlated or that a correlation did not exist. The results showed that although some neighbouring countries are strongly correlated, other countries that are not geographically close are also correlated. In addition, some countries on opposite sides of Europe (Belgium and Armenia) are also correlated. Other countries (France, Iceland, Israel, Kosovo, San Marino, Spain, Sweden and Turkey) were either weakly correlated or had no relationship at all.
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Affiliation(s)
- Jihan Muhaidat
- Department of Dermatology, Faculty of Medicine, Jordan University of Science and Technology, Irbid, 22110 Jordan
| | - Aiman Albatayneh
- Energy Engineering Department, School of Natural Resources Engineering and Management, German Jordanian University, P.O. Box 35247, Amman, 11180 Jordan
| | - Ramez Abdallah
- Mechanical and Mechatronics Engineering Department, Faculty of Engineering and Information Technology, An-Najah National University, P.O. Box 7, Nablus, Palestine
| | - Iliana Papamichael
- Lab of Chemical Engineering and Engineering Sustainability, Faculty of Pure and Applied Sciences, Open University of Cyprus, Giannou Kranidioti 33, 2220 Nicosia, Cyprus
| | - Georgia Chatziparaskeva
- Lab of Chemical Engineering and Engineering Sustainability, Faculty of Pure and Applied Sciences, Open University of Cyprus, Giannou Kranidioti 33, 2220 Nicosia, Cyprus
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Yang M, Li A, Xie G, Pang Y, Zhou X, Jin Q, Dai J, Yan Y, Guo Y, Liu X. Transmission of COVID-19 from community to healthcare agencies and back to community: a retrospective study of data from Wuhan, China. BMJ Open 2021; 11:e053068. [PMID: 34921080 PMCID: PMC8688731 DOI: 10.1136/bmjopen-2021-053068] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/05/2021] [Accepted: 11/11/2021] [Indexed: 11/17/2022] Open
Abstract
BACKGROUND The early spatiotemporal transmission of COVID-19 remains unclear. The community to healthcare agencies and back to community (CHC) model was tested in our study to simulate the early phase of COVID-19 transmission in Wuhan, China. METHODS We conducted a retrospective study. COVID-19 case series reported to the Municipal Notifiable Disease Report System of Wuhan from December 2019 to March 2020 from 17 communities were collected. Cases from healthcare workers (HW) and from community members (CM) were distinguished by documented occupations. Overall spatial and temporal relationships between HW and CM COVID-19 cases were visualised. The CHC model was then simulated. The turning point separating phase 1 and phase 2 was determined using a quadratic model. For phases 1 and 2, linear regression was used to quantify the relationship between HW and CM COVID-19 cases. RESULTS The spatial and temporal distributions of COVID-19 cases between HWs and CMs were closely correlated. The turning point was 36.85±18.37 (range 15-70). The linear model fitted well for phase 1 (mean R2=0.98) and phase 2 (mean R2=0.93). In phase 1, the estimated [Formula: see text]s were positive (from 18.03 to 94.99), with smaller [Formula: see text]s (from 2.98 to 15.14); in phase 2, the estimated [Formula: see text]s were negative (from -4.22 to -81.87), with larger [Formula: see text]s (from 5.37 to 78.12). CONCLUSION Transmission of COVID-19 from the community to healthcare agencies and back to the community was confirmed in Wuhan. Prevention and control measures for COVID-19 in hospitals and among HWs are crucial and warrant further attention.
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Affiliation(s)
- Mei Yang
- Department of Maternal and Child Health, Wuhan University of Science and Technology, Wuhan, China
| | - Anshu Li
- Department of Gastrointestinal Surgery, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Gengchen Xie
- Department of Gastrointestinal Surgery, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Yanhui Pang
- Department of Information Center, Wuhan Center for Disease Control and Prevention, Wuhan, China
| | - Xiaoqi Zhou
- Chronic Noncommunicable Diseases Control and Prevention, Wuhan Center for Disease Control and Prevention, Wuhan, China
| | - Qiman Jin
- Chronic Noncommunicable Diseases Control and Prevention, Wuhan Center for Disease Control and Prevention, Wuhan, China
| | - Juan Dai
- Chronic Noncommunicable Diseases Control and Prevention, Wuhan Center for Disease Control and Prevention, Wuhan, China
| | - Yaqiong Yan
- Chronic Noncommunicable Diseases Control and Prevention, Wuhan Center for Disease Control and Prevention, Wuhan, China
| | - Yan Guo
- Chronic Noncommunicable Diseases Control and Prevention, Wuhan Center for Disease Control and Prevention, Wuhan, China
| | - Xinghua Liu
- Department of Gastrointestinal Surgery, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
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Iloanusi O, Ross A. Leveraging weather data for forecasting cases-to-mortality rates due to COVID-19. CHAOS, SOLITONS, AND FRACTALS 2021; 152:111340. [PMID: 34421230 PMCID: PMC8372525 DOI: 10.1016/j.chaos.2021.111340] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/21/2021] [Revised: 08/10/2021] [Accepted: 08/11/2021] [Indexed: 06/13/2023]
Abstract
There are several recent publications criticizing the failure of COVID-19 forecasting models, with swinging over predictions and underpredictions, which have made it difficult for decision and policy making. Observing the failures of several COVID-19 forecasting models and the alarming spread of the virus, we seek to use some stable response for forecasting COVID-19, viz., ratios of COVID-19 cases to mortalities, rather than COVID-19 cases or fatalities. A trend of low COVID-19 cases-to-mortality ratios calls for urgent attention: the need for vaccines, for instance. Studies have shown that there are influences of weather parameters on COVID-19; and COVID-19 may have come to stay and could manifest a seasonal outbreak profile similar to other infectious respiratory diseases. In this paper, the influences of some weather, geographical, economic and demographic covariates were evaluated on COVID-19 response based on a series of Granger-causality tests. The effect of four weather parameters, viz., temperature, rainfall, solar irradiation and relative humidity, on daily COVID-19 cases-to-mortality ratios of 36 countries from 5 continents of the world were determined through regression analysis. Regression studies show that these four weather factors impact ratios of COVID-19 cases-to-mortality differently. The most impactful factor is temperature which is positively correlated with COVID-19 cases-to-mortality responses in 24 out of 36 countries. Temperature minimally affects COVID-19 cases-to-mortality ratios in the tropical countries. The most influential weather factor - temperature - was incorporated in training random forest and deep learning models for forecasting the cases-to-mortality rate of COVID-19 in clusters of countries in the world with similar weather conditions. Evaluation of trained forecasting models incorporating temperature features show better performance compared to a similar set of models trained without temperature features. This implies that COVID-19 forecasting models will predict more accurately if temperature features are factored in, especially for temperate countries.
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Affiliation(s)
- Ogechukwu Iloanusi
- Department of Electronic Engineering, University of Nigeria, Nsukka 410001, Enugu State, Nigeria
| | - Arun Ross
- Michigan State University, East Lansing, MI 48824 USA
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Paul A, Bhattacharjee JK, Pal A, Chakraborty S. Emergence of universality in the transmission dynamics of COVID-19. Sci Rep 2021; 11:18891. [PMID: 34556753 PMCID: PMC8460722 DOI: 10.1038/s41598-021-98302-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2021] [Accepted: 08/30/2021] [Indexed: 12/30/2022] Open
Abstract
The complexities involved in modelling the transmission dynamics of COVID-19 has been a roadblock in achieving predictability in the spread and containment of the disease. In addition to understanding the modes of transmission, the effectiveness of the mitigation methods also needs to be built into any effective model for making such predictions. We show that such complexities can be circumvented by appealing to scaling principles which lead to the emergence of universality in the transmission dynamics of the disease. The ensuing data collapse renders the transmission dynamics largely independent of geopolitical variations, the effectiveness of various mitigation strategies, population demographics, etc. We propose a simple two-parameter model-the Blue Sky model-and show that one class of transmission dynamics can be explained by a solution that lives at the edge of a blue sky bifurcation. In addition, the data collapse leads to an enhanced degree of predictability in the disease spread for several geographical scales which can also be realized in a model-independent manner as we show using a deep neural network. The methodology adopted in this work can potentially be applied to the transmission of other infectious diseases and new universality classes may be found. The predictability in transmission dynamics and the simplicity of our methodology can help in building policies for exit strategies and mitigation methods during a pandemic.
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Affiliation(s)
- Ayan Paul
- Deutsches Elektronen-Synchrotron DESY, Notkestr. 85, 22607, Hamburg, Germany.
- Institut für Physik, Humboldt-Universität zu Berlin, 12489, Berlin, Germany.
| | | | - Akshay Pal
- Indian Institute for Cultivation of Science, Jadavpur, Kolkata, 700032, India
| | - Sagar Chakraborty
- Department of Physics, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh, 208016, India
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10
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Martinez-Garcia M, Rabasa A, Barber X, Polotskaya K, Roomp K, Oliver N. Key factors affecting people's unwillingness to be confined during the COVID-19 pandemic in Spain: a large-scale population study. Sci Rep 2021; 11:18626. [PMID: 34545107 PMCID: PMC8452645 DOI: 10.1038/s41598-021-97645-1] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2021] [Accepted: 08/03/2021] [Indexed: 11/08/2022] Open
Abstract
Population confinements have been one of the most widely adopted non-pharmaceutical interventions (NPIs) implemented by governments across the globe to help contain the spread of the SARS-CoV-2 virus. While confinement measures have been proven to be effective to reduce the number of infections, they entail significant economic and social costs. Thus, different policy makers and social groups have exhibited varying levels of acceptance of this type of measures. In this context, understanding the factors that determine the willingness of individuals to be confined during a pandemic is of paramount importance, particularly, to policy and decision-makers. In this paper, we study the factors that influence the unwillingness to be confined during the COVID-19 pandemic by the means of a large-scale, online population survey deployed in Spain. We perform two types of analyses (logistic regression and automatic pattern discovery) and consider socio-demographic, economic and psychological factors, together with the 14-day cumulative incidence per 100,000 inhabitants. Our analysis of 109,515 answers to the survey covers data spanning over a 5-month time period to shed light on the impact of the passage of time. We find evidence of pandemic fatigue as the percentage of those who report an unwillingness to be in confinement increases over time; we identify significant gender differences, with women being generally less likely than men to be able to sustain long-term confinement of at least 6 months; we uncover that the psychological impact was the most important factor to determine the willingness to be in confinement at the beginning of the pandemic, to be replaced by the economic impact as the most important variable towards the end of our period of study. Our results highlight the need to design gender and age specific public policies, to implement psychological and economic support programs and to address the evident pandemic fatigue as the success of potential future confinements will depend on the population's willingness to comply with them.
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Affiliation(s)
| | - Alejandro Rabasa
- Universidad Miguel Hernández, Centro de Investigación Operativa, Elche, 03202, Spain
| | - Xavier Barber
- Universidad Miguel Hernández, Centro de Investigación Operativa, Elche, 03202, Spain
| | - Kristina Polotskaya
- Universidad Miguel Hernández, Centro de Investigación Operativa, Elche, 03202, Spain
| | | | - Nuria Oliver
- ELLIS Unit Alicante Foundation, Alicante, Spain.
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Vicuña MI, Vásquez C, Quiroga BF. Forecasting the 2020 COVID-19 Epidemic: A Multivariate Quasi-Poisson Regression to Model the Evolution of New Cases in Chile. Front Public Health 2021; 9:610479. [PMID: 33968875 PMCID: PMC8102770 DOI: 10.3389/fpubh.2021.610479] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2020] [Accepted: 03/25/2021] [Indexed: 02/01/2023] Open
Abstract
Objectives: To understand and forecast the evolution of COVID-19 (Coronavirus disease 2019) in Chile, and analyze alternative simulated scenarios to better predict alternative paths, in order to implement policy solutions to stop the spread and minimize damage. Methods: We have specified a novel multi-parameter generalized logistic growth model, which does not only look at the trend of the data, but also includes explanatory covariates, using a quasi-Poisson regression specification to account for overdispersion of the count data. We fitted our model to data from the onset of the disease (February 28) until September 15. Estimating the parameters from our model, we predicted the growth of the epidemic for the evolution of the disease until the end of October 2020. We also evaluated via simulations different fictional scenarios for the outcome of alternative policies (those analyses are included in the Supplementary Material). Results and Conclusions: The evolution of the disease has not followed an exponential growth, but rather, stabilized and moved downward after July 2020, starting to increase again after the implementation of the Step-by-Step policy. The lockdown policy implemented in the majority of the country has proven effective in stopping the spread, and the lockdown-relaxation policies, however gradual, appear to have caused an upward break in the trend.
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Affiliation(s)
- María Ignacia Vicuña
- Escuela de Administración, Pontificia Universidad Católica de Chile, Santiago, Chile
| | - Cristián Vásquez
- Escuela de Administración, Pontificia Universidad Católica de Chile, Santiago, Chile
| | - Bernardo F Quiroga
- Escuela de Administración, Pontificia Universidad Católica de Chile, Santiago, Chile
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Zhang Y, Xinguang C. Experiences of surveillance, influential factors, and prevention to end the global coronavirus disease 2019 (COVID-19) pandemic. ACTA ACUST UNITED AC 2021; 5:1-3. [PMID: 33850631 PMCID: PMC8032348 DOI: 10.1016/j.glohj.2021.02.008] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2020] [Revised: 01/18/2021] [Accepted: 02/09/2021] [Indexed: 12/18/2022]
Affiliation(s)
| | - Chen Xinguang
- Department of Epidemiology, University of Florida, Gainesville, FL 32610, USA
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13
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Zhang Y, Aycock L, Chen X. Levels of economic developement and the spread of coronavirus disease 2019 (COVID-19) in 50 U.S. states and territories and 28 European countries: an association analysis of aggregated data. ACTA ACUST UNITED AC 2021; 5:24-30. [PMID: 33585054 PMCID: PMC7871881 DOI: 10.1016/j.glohj.2021.02.006] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2020] [Revised: 12/29/2020] [Accepted: 01/28/2021] [Indexed: 12/23/2022]
Abstract
Background The coronavirus disease 2019 (COVID-19) became a global pandemic within several months after it was first reported at the end of December, 2019. Countries in the Northern Hemisphere have been affected the most, including the United States and European countries. Contrary to the common knowledge that infectious diseases are more prevalent in low- and middle-income countries, COVID-19 appears to affect wealthy countries more. This paper attempts to quantify the relationship between COVID-19 infections and levels of economic development with data from the U.S. and Europe. Methods Public domain data on the confirmed COVID-19 cases during January 1 and May 31, 2020 by states and territories in the U.S. and by countries in Europe were included. Incidence rate was estimated using the 2019 total population. COVID-19 cases were associated with 2019 gross domestic product (GDP) using regression models after a logarithmic transformation of the data. The U.S. data and European data were analyzed separately, considering significant heterogeneity between the two. Results A total of 2 451 691 COVID-19 cases during a 5-month period were analyzed, including 1 787 414 from 50 U.S. states and territories and 664 277 from 28 European countries. The overall incidence rate was 5.393/1000 for the U.S. and 1.411/1 000 for European countries with large variations. Lg (total cases) was significantly associated with lg (GDP) for U.S. states (= 1.2579, P < 0.001) and European countries (= 0.7156, P < 0.001), respectively. Conclusion This study demonstrated a positive correlation between COVID-19 case incidence and GDP in the United States and 28 European countries. Study findings suggest a potential role of high-level development in facilitating infectious disease spread, such as more advanced transportation system, large metropolitan cities with high population density, better domestic and international travel for businesses, leisure, and more group activities. These factors must be considered in controlling the COVID-19 epidemic. This study focuses on the impact of economic development, many other factors might also have contributed to the rapid spread of COVID-19 in these countries and states, such as differences in national and statewide anti-epidemic strategies, people’s behavior, and healthcare systems. Besides, low- and middle-income countries may have an artificially low COVID-19 case count just due to lack of diagnostic capabilities. Findings of this study also encourage future research with individual-level data to detect risk factors at the personal level to understand the risk of COVID-19.
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Affiliation(s)
| | - Lauren Aycock
- College of Public Health and Health Professions & College of Medicine, University of Florida, FL 32610, USA
| | - Xinguang Chen
- College of Public Health and Health Professions & College of Medicine, University of Florida, FL 32610, USA
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Rahimi I, Chen F, Gandomi AH. A review on COVID-19 forecasting models. Neural Comput Appl 2021; 35:1-11. [PMID: 33564213 PMCID: PMC7861008 DOI: 10.1007/s00521-020-05626-8] [Citation(s) in RCA: 40] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2020] [Accepted: 12/11/2020] [Indexed: 12/23/2022]
Abstract
The novel coronavirus (COVID-19) has spread to more than 200 countries worldwide, leading to more than 36 million confirmed cases as of October 10, 2020. As such, several machine learning models that can forecast the outbreak globally have been released. This work presents a review and brief analysis of the most important machine learning forecasting models against COVID-19. The work presented in this study possesses two parts. In the first section, a detailed scientometric analysis presents an influential tool for bibliometric analyses, which were performed on COVID-19 data from the Scopus and Web of Science databases. For the above-mentioned analysis, keywords and subject areas are addressed, while the classification of machine learning forecasting models, criteria evaluation, and comparison of solution approaches are discussed in the second section of the work. The conclusion and discussion are provided as the final sections of this study.
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Affiliation(s)
- Iman Rahimi
- Department of Mechanical and Manufacturing Engineering, Faculty of Engineering, Universiti Putra Malaysia, Seri Kembangan, Malaysia
| | - Fang Chen
- Data Science Institute, University of Technology Sydney, Ultimo, 2007 NSW Australia
| | - Amir H. Gandomi
- Data Science Institute, University of Technology Sydney, Ultimo, 2007 NSW Australia
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15
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An SIER model to estimate optimal transmission rate and initial parameters of COVD-19 dynamic in Sri Lanka. ALEXANDRIA ENGINEERING JOURNAL 2021; 60:1557-1563. [PMCID: PMC7834235 DOI: 10.1016/j.aej.2020.11.010] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2020] [Revised: 10/15/2020] [Accepted: 11/09/2020] [Indexed: 05/21/2023]
Abstract
COVID-19 global outbreak has been significantly damaging the human well-being, life style of people and the global economy. It is clear that the entire world is moving into a dangerous phase of this epidemic at the moment. With absence of a preventive vaccine, the governments across world implement, monitor and manage various public health and social distancing measures to control the spread of this extremely contagious disease and it is found that most of these responses have been critical results of numerous mathematical and decision support models. In this study, SEIR compartment structure is used to model the COVID-19 transmission in Sri Lanka. Reported cases data during the first 80 days of the outbreak is used to model the time dependent transmission rate of the disease. Optimal transmission rates and initial size of the exposed and infected sizes of the populations are then estimated matching between clinically identified cases to model based simulated outcomes.
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16
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Lin YT, Neumann J, Miller EF, Posner RG, Mallela A, Safta C, Ray J, Thakur G, Chinthavali S, Hlavacek WS. Daily Forecasting of New Cases for Regional Epidemics of Coronavirus Disease 2019 with Bayesian Uncertainty Quantification. MEDRXIV : THE PREPRINT SERVER FOR HEALTH SCIENCES 2021:2020.07.20.20151506. [PMID: 32743595 PMCID: PMC7386519 DOI: 10.1101/2020.07.20.20151506] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
UNLABELLED To increase situational awareness and support evidence-based policy-making, we formulated a mathematical model for COVID-19 transmission within a regional population. This compartmental model accounts for quarantine, self-isolation, social distancing, a non-exponentially distributed incubation period, asymptomatic individuals, and mild and severe forms of symptomatic disease. Using Bayesian inference, we have been calibrating region-specific models daily for consistency with new reports of confirmed cases from the 15 most populous metropolitan statistical areas in the United States and quantifying uncertainty in parameter estimates and predictions of future case reports. This online learning approach allows for early identification of new trends despite considerable variability in case reporting. ARTICLE SUMMARY LINE We report models for regional COVID-19 epidemics and use of Bayesian inference to quantify uncertainty in daily predictions of expected reporting of new cases, enabling identification of new trends in surveillance data.
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Zreiq R, Kamel S, Boubaker S, Al-Shammary AA, Algahtani FD, Alshammari F. Generalized Richards model for predicting COVID-19 dynamics in Saudi Arabia based on particle swarm optimization Algorithm. AIMS Public Health 2020; 7:828-843. [PMID: 33294485 PMCID: PMC7719563 DOI: 10.3934/publichealth.2020064] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2020] [Accepted: 10/29/2020] [Indexed: 12/23/2022] Open
Abstract
COVID-19 pandemic is spreading around the world becoming thus a serious concern for health, economic and social systems worldwide. In such situation, predicting as accurately as possible the future dynamics of the virus is a challenging problem for scientists and decision-makers. In this paper, four phenomenological epidemic models as well as Suspected-Infected-Recovered (SIR) model are investigated for predicting the cumulative number of infected cases in Saudi Arabia in addition to the probable end-date of the outbreak. The prediction problem is formulated as an optimization framework and solved using a Particle Swarm Optimization (PSO) algorithm. The Generalized Richards Model (GRM) has been found to be the best one in achieving two objectives: first, fitting the collected data (covering 223 days between March 2nd and October 10, 2020) with the lowest mean absolute percentage error (MAPE = 3.2889%), the highest coefficient of determination (R2 = 0.9953) and the lowest root mean squared error (RMSE = 8827); and second, predicting a probable end date found to be around the end of December 2020 with a projected number of 378,299 at the end of the outbreak. The obtained results may help the decision-makers to take suitable decisions related to the pandemic mitigation and containment and provide clear understanding of the virus dynamics in Saudi Arabia.
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Affiliation(s)
- Rafat Zreiq
- Department of Public Health, College of Public Health and Health Informatics, University of Ha'il, Ha'il, Saudi Arabia.,Molecular Diagnostic and Personalized Therapeutics Unit, University of Ha'il, Ha'il, Saudi Arabia
| | - Souad Kamel
- Department of Computer & Networks Engineering, College of Computer Science and Engineering, University of Jeddah, Jeddah, Saudi Arabia
| | - Sahbi Boubaker
- Department of Computer & Networks Engineering, College of Computer Science and Engineering, University of Jeddah, Jeddah, Saudi Arabia
| | - Asma A Al-Shammary
- Department of Public Health, College of Public Health and Health Informatics, University of Ha'il, Ha'il, Saudi Arabia.,Department of Biology, Faculty of Science, University of Ha'il, Ha'il, Saudi Arabia
| | - Fahad D Algahtani
- Department of Public Health, College of Public Health and Health Informatics, University of Ha'il, Ha'il, Saudi Arabia.,Molecular Diagnostic and Personalized Therapeutics Unit, University of Ha'il, Ha'il, Saudi Arabia
| | - Fares Alshammari
- Department of Health Informatics, College of Public Health and Health Informatics, University of Ha'il, Ha'il, Saudi Arabia
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Pacheco-Barrios K, Cardenas-Rojas A, Giannoni-Luza S, Fregni F. COVID-19 pandemic and Farr's law: A global comparison and prediction of outbreak acceleration and deceleration rates. PLoS One 2020; 15:e0239175. [PMID: 32941485 PMCID: PMC7498003 DOI: 10.1371/journal.pone.0239175] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2020] [Accepted: 08/16/2020] [Indexed: 11/18/2022] Open
Abstract
The COVID-19 outbreak has forced most of the global population to lock-down and has put in check the health services all over the world. Current predictive models are complex, region-dependent, and might not be generalized to other countries. However, a 150-year old epidemics law promulgated by William Farr might be useful as a simple arithmetical model (percent increase [R1] and acceleration [R2] of new cases and deaths) to provide a first sight of the epidemic behavior and to detect regions with high predicted dynamics. Thus, this study tested Farr's Law assumptions by modeling COVID-19 data of new cases and deaths. COVID-19 data until April 10, 2020, was extracted from available countries, including income, urban index, and population characteristics. Farr's law first (R1) and second ratio (R2) were calculated. We constructed epidemic curves and predictive models for the available countries and performed ecological correlation analysis between R1 and R2 with demographic data. We extracted data from 210 countries, and it was possible to estimate the ratios of 170 of them. Around 42·94% of the countries were in an initial acceleration phase, while 23·5% already crossed the peak. We predicted a reduction close to zero with wide confidence intervals for 56 countries until June 10 (high-income countries from Asia and Oceania, with strict political actions). There was a significant association between high R1 of deaths and high urban index. Farr's law seems to be a useful model to give an overview of COVID-19 pandemic dynamics. The countries with high dynamics are from Africa and Latin America. Thus, this is a call to urgently prioritize actions in those countries to intensify surveillance, to re-allocate resources, and to build healthcare capacities based on multi-nation collaboration to limit onward transmission and to reduce the future impact on these regions in an eventual second wave.
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Affiliation(s)
- Kevin Pacheco-Barrios
- Spaulding Research Institute, Spaulding Rehabilitation Hospital and Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts, United States of America
- Unidad de Investigación para la Generación y Síntesis de Evidencias en Salud, Universidad San Ignacio de Loyola, Lima, Peru
| | - Alejandra Cardenas-Rojas
- Spaulding Research Institute, Spaulding Rehabilitation Hospital and Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts, United States of America
| | - Stefano Giannoni-Luza
- Spaulding Research Institute, Spaulding Rehabilitation Hospital and Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts, United States of America
| | - Felipe Fregni
- Spaulding Research Institute, Spaulding Rehabilitation Hospital and Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts, United States of America
- Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, United States of America
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19
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Ghosh P, Ghosh R, Chakraborty B. COVID-19 in India: Statewise Analysis and Prediction. JMIR Public Health Surveill 2020; 6:e20341. [PMID: 32763888 PMCID: PMC7431238 DOI: 10.2196/20341] [Citation(s) in RCA: 35] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2020] [Revised: 07/14/2020] [Accepted: 07/28/2020] [Indexed: 12/18/2022] Open
Abstract
BACKGROUND The highly infectious coronavirus disease (COVID-19) was first detected in Wuhan, China in December 2019 and subsequently spread to 212 countries and territories around the world, infecting millions of people. In India, a large country of about 1.3 billion people, the disease was first detected on January 30, 2020, in a student returning from Wuhan. The total number of confirmed infections in India as of May 3, 2020, is more than 37,000 and is currently growing fast. OBJECTIVE Most of the prior research and media coverage focused on the number of infections in the entire country. However, given the size and diversity of India, it is important to look at the spread of the disease in each state separately, wherein the situations are quite different. In this paper, we aim to analyze data on the number of infected people in each Indian state (restricted to only those states with enough data for prediction) and predict the number of infections for that state in the next 30 days. We hope that such statewise predictions would help the state governments better channelize their limited health care resources. METHODS Since predictions from any one model can potentially be misleading, we considered three growth models, namely, the logistic, the exponential, and the susceptible-infectious-susceptible models, and finally developed a data-driven ensemble of predictions from the logistic and the exponential models using functions of the model-free maximum daily infection rate (DIR) over the last 2 weeks (a measure of recent trend) as weights. The DIR is used to measure the success of the nationwide lockdown. We jointly interpreted the results from all models along with the recent DIR values for each state and categorized the states as severe, moderate, or controlled. RESULTS We found that 7 states, namely, Maharashtra, Delhi, Gujarat, Madhya Pradesh, Andhra Pradesh, Uttar Pradesh, and West Bengal are in the severe category. Among the remaining states, Tamil Nadu, Rajasthan, Punjab, and Bihar are in the moderate category, whereas Kerala, Haryana, Jammu and Kashmir, Karnataka, and Telangana are in the controlled category. We also tabulated actual predicted numbers from various models for each state. All the R2 values corresponding to the logistic and the exponential models are above 0.90, indicating a reasonable goodness of fit. We also provide a web application to see the forecast based on recent data that is updated regularly. CONCLUSIONS States with nondecreasing DIR values need to immediately ramp up the preventive measures to combat the COVID-19 pandemic. On the other hand, the states with decreasing DIR can maintain the same status to see the DIR slowly become zero or negative for a consecutive 14 days to be able to declare the end of the pandemic.
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Affiliation(s)
- Palash Ghosh
- Department of Mathematics, Indian Institute of Technology, Guwahati, India
- Centre for Quantitative Medicine, Duke-National University of Singapore Medical School, Singapore, Singapore
| | - Rik Ghosh
- Department of Mathematics, Indian Institute of Technology, Guwahati, India
| | - Bibhas Chakraborty
- Centre for Quantitative Medicine & Programme in Health Services and Systems Research, Duke-National University of Singapore Medical School, Singapore, Singapore
- Department of Statistics and Applied Probability, National University of Singapore, Singapore, Singapore
- Department of Biostatistics and Bioinformatics, Duke University, Durham, NC, United States
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