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Newer Methods Drive Recent Insights into Rab GTPase Biology: An Overview. Methods Mol Biol 2021. [PMID: 34453706 DOI: 10.1007/978-1-0716-1346-7_1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/18/2023]
Abstract
The conserved Ypt/Rab GTPases regulate all major intracellular protein traffic pathways, including secretion, endocytosis and autophagy. These GTPases undergo distinct changes in conformation between their GTP- and GDP-bound forms and cycle between the cytoplasm and membranes with the aid of their upstream regulators. When activated on the membrane in the GTP-bound form, they recruit their downstream effectors, which include components of vesicular transport. Progress in the past 5 years regarding mechanisms of Rab action, functions, and the effects of disruption of these functions on the well-being of cells and organisms has been propelled by advances in methodologies in molecular and cellular biology. Here, we highlight methods used recently to analyze regulation, localization, interactions, and function of Rab GTPases and their roles in human disease. We discuss contributions of these methods to new insights into Rabs, as well as their future use in addressing open questions in the field of Rab biology.
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Yu H, Yong W, Gao T, Na M, Zhang Y, Kuguminkiriza IH, Kenechukwu AA, Guo Q, Zhang G, Deng X. Hormesis of low-dose inhibition of pAkt1 (Ser473) followed by a great increase of proline-rich inositol polyphosphate 5-phosphatase (PIPP) level in oocytes. In Vitro Cell Dev Biol Anim 2021; 57:342-349. [PMID: 33537929 DOI: 10.1007/s11626-021-00546-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2020] [Accepted: 01/06/2021] [Indexed: 10/22/2022]
Abstract
Hormesis describes a biphasic dose-response relationship generally characterized by a low-dose excitement and a high-dose inhibition. This phenomenon has been observed in the regulation of cell, organ, and organismic level. However, hormesis has not reported in oocytes. In this study, we observed, for the first time, hormetic responses of PIPP levels in oocytes by inhibitor of Akt1 or PKCδ. The expression of PIPP was detected by qPCR, immunofluorescent (IF), and Western Blot (WB). To observe the changes of PIPP levels, we used the inhibitors against pAkt1 (Ser473) or PKCδ, SH-6 or sotrastaurin with low and/or high-dose, treated GV oocytes and cultured for 4 h, respectively. The results showed that PIPP expression was significantly enhanced when oocytes were treated with SH-6 or sotrastaurin 10 μM, but decreased with SH-6 or sotrastaurin 100 μM. We also examined the changes of PIPP levels when GV oocytes were treated with exogenous PtdIns(3,4,5)P3 or LY294002 for 4 h. Our results showed that PIPP level was enhanced much higher under the treatment of 0.1 μM PtdIns(3,4,5)P3 than that of 1 μM PtdIns(3,4,5)P3, which is consistent with the changes of PIPP when oocytes were treated with inhibitors of pAkt1 (Ser473) or PKCδ. In addition, with PIPP siRNA, we detected that down-regulated PIPP may affect distributions of Akt, Cdc25, and pCdc2 (Tyr15). Taken together, these results show that the relationships between PIPP and Akt may follow the principle of hormesis and play a key role during release of diplotene arrest in mouse oocytes.
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Affiliation(s)
- Hang Yu
- Department of Physics and Biophysics, School of Fundamental Sciences, China Medical University (CMU), Shenyang, 110122, People's Republic of China
| | - Wei Yong
- Center Laboratory of the Fourth Affiliated Hospital, China Medical University (CMU), Shenyang, 110032, People's Republic of China
| | - Teng Gao
- Center Laboratory of the Fourth Affiliated Hospital, China Medical University (CMU), Shenyang, 110032, People's Republic of China
| | - Man Na
- Center Laboratory of the Fourth Affiliated Hospital, China Medical University (CMU), Shenyang, 110032, People's Republic of China
| | - Ye Zhang
- Center Laboratory of the Fourth Affiliated Hospital, China Medical University (CMU), Shenyang, 110032, People's Republic of China
| | | | | | - Qingguo Guo
- Department of Biochemistry and Molecular Biology, CMU, Shenyang, China
| | - Guoli Zhang
- Institute of Veterinary Medicine, The Academy of Military Medical Sciences of PLA, Changchun, 130122, Jilin, People's Republic of China
| | - Xin Deng
- Center Laboratory of the Fourth Affiliated Hospital, China Medical University (CMU), Shenyang, 110032, People's Republic of China.
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Liu L, Li S, Li H, Yu D, Li C, Li G, Cao Y, Feng C, Deng X. Protein kinase Cδ (PKCδ) involved in the regulation of pAkt1 (Ser473) on the release of mouse oocytes from diplotene arrest. Cell Biochem Funct 2018; 36:221-227. [PMID: 29774951 DOI: 10.1002/cbf.3334] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2018] [Revised: 03/21/2018] [Accepted: 04/23/2018] [Indexed: 12/12/2022]
Affiliation(s)
- Lingling Liu
- Department of Physiology; Basic Medical Scientific Research College, CMU; Shenyang PR China
- Central Laboratory of the Fourth Affiliated Hospital; China Medical University (CMU); Shenyang PR China
| | - Sen Li
- Department of Neurology; the Fourth Affiliated Hospital, CMU; Shenyang PR China
| | - Hanwen Li
- Department of Anorectum; the Fourth Affiliated Hospital, CMU; Shenyang PR China
| | - Dahai Yu
- IVF Center; Affiliated Shengjing Hospital, CMU; Shenyang PR China
| | - Chunyu Li
- Department of Anorectum; the Fourth Affiliated Hospital, CMU; Shenyang PR China
| | - Gensong Li
- Department of Physiology; Basic Medical Scientific Research College, CMU; Shenyang PR China
| | - Yu Cao
- Department of Physiology; Basic Medical Scientific Research College, CMU; Shenyang PR China
| | - Chen Feng
- Department of Biochemistry and Molecular Biology; CMU; Shenyang PR China
| | - Xin Deng
- Department of Physiology; Basic Medical Scientific Research College, CMU; Shenyang PR China
- Central Laboratory of the Fourth Affiliated Hospital; China Medical University (CMU); Shenyang PR China
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