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Dean JLS, Winkler VS, Boyer MA, Sibert EL, Fournier JA. Investigating Intramolecular H Atom Transfer Dynamics in β-Diketones with Ultrafast Infrared Spectroscopies and Theoretical Modeling. J Phys Chem A 2023; 127:9258-9272. [PMID: 37882618 DOI: 10.1021/acs.jpca.3c05417] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2023]
Abstract
The vibrational signatures and ultrafast dynamics of the intramolecular H-bond in a series of β-diketones are investigated with 2D IR spectroscopy and computational modeling. The chosen β-diketones exhibit a range of H atom donor-acceptor distances and asymmetry along the H atom transfer coordinate that tunes the intramolecular H-bond strength. The species with the strongest H-bonds are calculated to have very soft H atom potentials, resulting in highly red-shifted OH stretch fundamental frequencies and dislocation of the H atom upon vibrational excitation. These soft potentials lead to significant coupling to the other normal mode coordinates and give rise to the very broad vibrational signatures observed experimentally. The 2D IR spectra in both the OH and OD stretch regions of the light and deuterated isotopologues reveal broadened and long-lived ground-state bleach signatures of the vibrationally hot molecules. Polarization-sensitive transient absorption measurements in the OH and OD stretch regions reveal notable isotopic differences in orientational dynamics. Orientational relaxation was measured to occur on ∼600 fs and ∼2 ps time scales for the light and deuterated isotopologues, respectively. The orientational dynamics are interpreted in terms of activated H/D atom transfer events driven by collective intramolecular structural rearrangements.
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Affiliation(s)
- Jessika L S Dean
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri 63130, United States
| | - Valerie S Winkler
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri 63130, United States
| | - Mark A Boyer
- Department of Chemistry and Theoretical Chemistry Institute, University of Wisconsin Madison, Madison, Wisconsin 53706, United States
| | - Edwin L Sibert
- Department of Chemistry and Theoretical Chemistry Institute, University of Wisconsin Madison, Madison, Wisconsin 53706, United States
| | - Joseph A Fournier
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri 63130, United States
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Dean JLS, Fournier JA. Vibrational Dynamics of the Intramolecular H-Bond in Acetylacetone Investigated with Transient and 2D IR Spectroscopy. J Phys Chem B 2022; 126:3551-3562. [PMID: 35536173 DOI: 10.1021/acs.jpcb.2c00793] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Acetylacetone (AcAc) has proven to be a fruitful but highly challenging model system for the experimental and computational interrogation of strong intramolecular hydrogen bonds. Key questions remain, however, regarding the identity of the minimum-energy structure of AcAc and the dynamics of intramolecular proton transfer. Here, we investigate the OH/OD stretch and bend regions of the enol tautomer of AcAc and its deuterated isotopologue with transient absorption and 2D IR spectroscopy. The OH bend region reveals a single dominant diagonal transition near 1625 cm-1 with intense cross peaks to lower-frequency modes, demonstrating highly mixed fingerprint transitions that contain OH bend character. The anharmonic coupling of the OH bend results in a highly elongated OH bend excited-state absorption transition that indicates a large manifold of OH bend overtone/combination bands in the OH stretch region that leads to strong bend-stretch Fermi resonance interactions. The OH and OD stretch regions consist of broad ground-state bleach signals, but there is no clear evidence of ω21 excited-state absorptions due to rapid population relaxation arising from strong intramolecular coupling to bending, fingerprint, and low-frequency H-bond modes. Orientational relaxation dynamics persist for timescales longer than the vibrational lifetimes, with polarization anisotropy components decaying within approximately 2 and 10 periods of the O-O oscillation for the OH and OD stretch, respectively. The significant isotopic dependence of the orientational dynamics is discussed in the context of intramolecular mode coupling, diffusional processes, and contributions from proton/deuteron transfer dynamics.
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Affiliation(s)
- Jessika L S Dean
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri, United States 63130
| | - Joseph A Fournier
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri, United States 63130
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Kelsheimer CJ, Garrett-Roe S. Intramolecular Vibrational Energy Relaxation of CO 2 in Cross-Linked Poly(ethylene glycol) Diacrylate-Based Ion Gels. J Phys Chem B 2021; 125:1402-1415. [PMID: 32955891 DOI: 10.1021/acs.jpcb.0c06685] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Ultrafast two-dimensional infrared spectroscopy (2D-IR) and Fourier transform infrared spectroscopy (FTIR) were used to measure carbon dioxide (CO2) in 1-ethyl-3-methylimidazolium bis(trifluoromethylsulfonyl)imide ([emim][Tf2N]), cross-linked low-molecular-weight poly(ethylene glycol) diacrylate (PEGDA), and an ion gel composed of a 50 vol % blend of the two. The center frequency of the antisymmetric stretch, ν3, of CO2 shifts monotonically to lower wavenumbers with increasing polymer content, with the largest line width in the ion gel (6 cm-1). Increasing polymer content slows both spectral diffusion and vibrational energy relaxation (VER) rates. An unexpected excited-state absorbance peak appears in the 2D-IR of cross-linked PEGDA due to VER from the antisymmetric stretch into the bending mode, ν2. Thirty-two response functions are necessary to describe the observed features in the 2D-IR spectra. Nonlinear least-squares fitting extracts both spectral diffusion and VER rates. In the ion gel, CO2 exhibits spectral diffusion dynamics that lie between that of the pure compounds. The kinetics of VER reflect both fast excitation and de-excitation of the bending mode, similar to the ionic liquid (IL), and slow overall vibrational population relaxation, similar to the cross-linked polymer. The IL-like and polymer-like dynamics suggest that the CO2 resides at the interface of the two components in the ion gel.
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Affiliation(s)
- C J Kelsheimer
- Department of Chemistry, University of Pittsburgh, 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
| | - Sean Garrett-Roe
- Department of Chemistry, University of Pittsburgh, 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
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Cao X, Gong N, Zhao H, Li Z, Sun C, Men Z. Raman spectroscopic study of nonlinear modulation on Fermi resonance of acetonitrile by hydrogen-bonding network. J Mol Liq 2019. [DOI: 10.1016/j.molliq.2019.02.016] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Hamm P, Stock G. Nonadiabatic vibrational dynamics in the HCO2−⋅H2O complex. J Chem Phys 2015; 143:134308. [DOI: 10.1063/1.4932189] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Peter Hamm
- Department of Chemistry, University of Zurich, Zurich, Switzerland
| | - Gerhard Stock
- Biomolecular Dynamics, Institute of Physics, Albert Ludwigs University, 79104 Freiburg, Germany
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Affiliation(s)
- Peter Hamm
- Physikalisch-Chemisches Institut, Universität Zürich , Zürich, Switzerland
| | - Gerhard Stock
- Biomolecular Dynamics, Institute of Physics, Albert Ludwigs University , Freiburg, Germany
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Hamm P, Stock G. Vibrational conical intersections as a mechanism of ultrafast vibrational relaxation. PHYSICAL REVIEW LETTERS 2012; 109:173201. [PMID: 23215183 DOI: 10.1103/physrevlett.109.173201] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2012] [Indexed: 06/01/2023]
Abstract
Presenting true crossings of adiabatic potential energy surfaces, conical intersections are a paradigm of ultrafast and efficient electronic relaxation dynamics. The same mechanism is shown to apply also for vibrational conical intersections, which may occur when two high-frequency modes (such as OH stretch vibrations) are coupled to low-frequency modes (such as hydrogen bonding modes). By derivation of a model Hamiltonian and its parametrization for a concrete example, malonaldehyde, the conditions that such conical intersections occur are identified and the consequences for the vibrational dynamics and spectra are demonstrated.
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Affiliation(s)
- Peter Hamm
- Physikalisch-Chemisches Institut, Universität Zürich, Winterthurerstrasse 190, CH-8057 Zürich, Switzerland
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Yang M, Szyc Ł, Dreyer J, Nibbering ETJ, Elsaesser T. The Hydrogen-Bonded 2-Pyridone Dimer Model System. 2. Femtosecond Mid-Infrared Pump−Probe Study. J Phys Chem A 2010; 114:12195-201. [PMID: 21038900 DOI: 10.1021/jp108096y] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Affiliation(s)
- Ming Yang
- Max Born Institut für Nichtlineare Optik und Kurzzeitspektroskopie, Max Born Strasse 2A, D-12489 Berlin, Germany
| | - Łukasz Szyc
- Max Born Institut für Nichtlineare Optik und Kurzzeitspektroskopie, Max Born Strasse 2A, D-12489 Berlin, Germany
| | - Jens Dreyer
- Max Born Institut für Nichtlineare Optik und Kurzzeitspektroskopie, Max Born Strasse 2A, D-12489 Berlin, Germany
| | - Erik T. J. Nibbering
- Max Born Institut für Nichtlineare Optik und Kurzzeitspektroskopie, Max Born Strasse 2A, D-12489 Berlin, Germany
| | - Thomas Elsaesser
- Max Born Institut für Nichtlineare Optik und Kurzzeitspektroskopie, Max Born Strasse 2A, D-12489 Berlin, Germany
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Yan YA, Petković M, Krishnan GM, Kühn O. IR spectrum of the O–H⋯O hydrogen bond of phthalic acid monomethylester in gas phase and in CCl4 solution. J Mol Struct 2010. [DOI: 10.1016/j.molstruc.2009.12.021] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Infrared-induced coherent vibration of a hydrogen-bonded system: Effects of mechanical and electrical anharmonic couplings. J Chem Phys 2009; 131:044512. [DOI: 10.1063/1.3181777] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023] Open
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Jiang D, Wang YY, Xu YN, Dai LY. Ring-Opening of Cyclic Anhydrides using Ionic Liquids. JOURNAL OF CHEMICAL RESEARCH 2009. [DOI: 10.3184/030823409x417298] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Four novel Brønsted acidic ionic liquids with two different acid sites on the imidazolium cations were synthesised and employed as catalysts and solvents for the ring-opening of cyclic anhydrides to synthesise half-esters. The results showed that these novel Brønsted acidic ionic liquids were efficient and recyclable. Good yields, short reaction times and mild reaction conditions were achieved.
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Affiliation(s)
- Dong Jiang
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes, Department of Chemistry, East China Normal University, Shanghai 200062, P.R. China
| | - Yuan Yuan Wang
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes, Department of Chemistry, East China Normal University, Shanghai 200062, P.R. China
| | - Yan Nan Xu
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes, Department of Chemistry, East China Normal University, Shanghai 200062, P.R. China
| | - Li Yi Dai
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes, Department of Chemistry, East China Normal University, Shanghai 200062, P.R. China
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Nucci NV, Scott JN, Vanderkooi JM. Coupling of complex aromatic ring vibrations to solvent through hydrogen bonds: effect of varied on-ring and off-ring hydrogen-bonding substitutions. J Phys Chem B 2008; 112:4022-35. [PMID: 18331017 DOI: 10.1021/jp0758770] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
In this study, we examine the coupling of a complex ring vibration to solvent through hydrogen-bonding interactions. We compare phenylalanine, tyrosine, l-dopa, dopamine, norepinephrine, epinephrine, and hydroxyl-dl-dopa, a group of physiologically important small molecules that vary by single differences in H-bonding substitution. By examination of the temperature dependence of infrared absorptions of these molecules, we show that complex, many-atom vibrations can be coupled to solvent through hydrogen bonds and that the extent of that coupling is dependent on the degree of both on- and off-ring H-bonding substitution. The coupling is seen as a temperature-dependent frequency shift in infrared spectra, but the determination of the physical origin of that shift is based on additional data from temperature-dependent optical experiments and ab initio calculations. The optical experiments show that these small molecules are most sensitive to their immediate H-bonding environment rather than to bulk solvent properties. Ab initio calculations demonstrate H-bond-mediated vibrational coupling for the system of interest and also show that the overall small molecule solvent dependence is determined by a complex interplay of specific interactions and bulk solvation characteristics. Our findings indicate that a full understanding of biomolecule vibrational properties must include consideration of explicit hydrogen-bonding interactions with the surrounding microenvironment.
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Affiliation(s)
- Nathaniel V Nucci
- Department of Biochemistry and Biophysics, University of Pennsylvania, 422 Curie Boulevard, Philadelphia, Pennsylvania 19104, USA.
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Ueno Y, Ajito K. Terahertz time-domain spectra of aromatic carboxylic acids incorporated in nano-sized pores of mesoporous silicate. ANAL SCI 2007; 23:803-7. [PMID: 17625321 DOI: 10.2116/analsci.23.803] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Terahertz time-domain spectroscopy (THz-TDS) is used to study the intra- and intermolecular vibrational modes of aromatic carboxylic acids, for example, o-phthalic acid, benzoic acid, and salicylic acid, which form either intra- or intermolecular hydrogen bond(s) in different ways. Incorporating the target molecules in nano-sized spaces in mesoporous silicate (SBA-16) is found to be effective for the separate detection of intramolecular hydrogen bonding modes and intermolecular modes. The results are supported by an analysis of the differences in the peak shifts, which depend on temperature, caused by the different nature of the THz absorption. Raman spectra revealed that incorporating the molecules in the nano-sized pores of SBA-16 slightly changes the molecular structures. In the future, THz-TDS using nanoporous materials will be used to analyze the intra- and intermolecular vibrational modes of molecules with larger hydrogen bonding networks such as proteins or DNA.
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Affiliation(s)
- Yuko Ueno
- NTT Basic Research Laboratories, Atsugi, Kanagawa, Japan.
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Heyne K, Huse N, Dreyer J, Nibbering ETJ, Elsaesser T, Mukamel S. Coherent low-frequency motions of hydrogen bonded acetic acid dimers in the liquid phase. J Chem Phys 2006; 121:902-13. [PMID: 15260622 DOI: 10.1063/1.1762873] [Citation(s) in RCA: 114] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023] Open
Abstract
Ultrafast vibrational dynamics of cyclic hydrogen bonded dimers and the underlying microscopic interactions are studied in temporally and spectrally resolved pump-probe experiments with 100 fs time resolution. Femtosecond excitation of the O-H and/or O-D stretching mode gives rise to pronounced changes of the O-H/O-D stretching absorption displaying both rate-like kinetic and oscillatory components. A lifetime of 200 fs is measured for the v=1 state of the O-H stretching oscillator. The strong oscillatory absorption changes are due to impulsively driven coherent wave packet motions along several low-frequency modes of the dimer between 50 and 170 cm(-1). Such wave packets generated via coherent excitation of the high-frequency O-H/O-D stretching oscillators represent a clear manifestation of the anharmonic coupling of low- and high-frequency modes. The underdamped low-frequency motions dephase on a time scale of 1-2 ps. Calculations of the vibrational potential energy surface based on density functional theory give the frequencies, anharmonic couplings, and microscopic elongations of the low-frequency modes, among them intermolecular hydrogen bond vibrations. Oscillations due to the excitonic coupling between the two O-H or O-D stretching oscillators are absent as is independently confirmed by experiments on mixed dimers with uncoupled O-H and O-D stretching oscillators.
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Affiliation(s)
- Karsten Heyne
- Max-Born-Institut fur Nichtlineare Optik und Kurzzeitspektroskopie, Max-Born-Strasse 2A, D-12489 Berlin, Germany.
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Heyne K, Nibbering ETJ, Elsaesser T, Petković M, Kühn O. Cascaded Energy Redistribution upon O−H Stretching Excitation in an Intramolecular Hydrogen Bond. J Phys Chem A 2004. [DOI: 10.1021/jp048653f] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Nibbering ETJ, Elsaesser T. Ultrafast Vibrational Dynamics of Hydrogen Bonds in the Condensed Phase. Chem Rev 2004; 104:1887-914. [PMID: 15080715 DOI: 10.1021/cr020694p] [Citation(s) in RCA: 422] [Impact Index Per Article: 20.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Erik T J Nibbering
- Max-Born-Institut für Nichtlineare Optik und Kurzzeitspektroskopie, Max-Born-Strasse 2 A, D-12489 Berlin, Germany
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Probing the Spectral Diffusion of Vibrational Transitions of OCN- and SCN- in Methanol by Three-Pulse Infrared Photon Echo Spectroscopy. J Phys Chem A 2003. [DOI: 10.1021/jp034362f] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
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Kühn O, Naundorf H. Dissipative wave packet dynamics of the intramolecular hydrogen bond in o-phthalic acid monomethylester. Phys Chem Chem Phys 2003. [DOI: 10.1039/b209587d] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
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Kühn O. Dissipative Laser-Driven Hydrogen-Bond Dynamics in Deuterated o-Phthalic Acid Monomethylester. J Phys Chem A 2002. [DOI: 10.1021/jp0209852] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Affiliation(s)
- O. Kühn
- Institut für Chemie, Physikalische und Theoretische Chemie, Freie Universität Berlin, Takustrasse 3, D-14195 Berlin
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