1
|
Hashimoto S, Yamazaki M, Uehara H, Yamazaki S, Kobayashi M, Yokoyama T, Yazawa K, Shiomi K. Evaluating bio-physicochemical properties of raw powder prepared from whole larvae containing liquid silk of the domestic silkworm. Front Nutr 2024; 11:1404489. [PMID: 38903626 PMCID: PMC11188413 DOI: 10.3389/fnut.2024.1404489] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2024] [Accepted: 05/08/2024] [Indexed: 06/22/2024] Open
Abstract
The domestic silkworm, Bombyx mori, has been widely used in silk production for centuries. It is also used as a bioreactor by the textile and pharmaceutical industries to mass produce recombinant bioactive proteins containing silk-based materials. Furthermore, silkworms are well-known as a source of food and have also been orally administered to prevent and treat several human disorders. In this study, we aimed to investigate the inherent bio-physicochemical properties of edible silkworms to accurately evaluate their clinical and nutritional potential. We prepared raw powder from whole larvae of silkworm. The yield rate of the powder derived from dried larvae was almost 100% (98.1-99.1% in replicates). As "percentage yield" translates to "Budomari" in Japanese, this raw powder was named "B100rw." We further prepared B100dn that was denatured through autoclaving. Thereafter, we examined whether B100rw sustained the original bio-physicochemical properties by comparing it with B100dn. There was no significant difference in nutritional content between B100rw and B100dn. B100rw contained proteins derived from silkworm larvae and mulberry leaves, whereas the proteins of B100dn were mostly degraded. On measuring the enzymatic activity of both powders using trehalase as an indicator enzyme, B100rw was found to maintain trehalase activity. B100rw also maintained a random coil conformation, similar to that of liquid silk. This suggested that B100rw sustained the unique bio-physicochemical properties of living larvae. These findings may facilitate the development of novel food products or orally administered vaccines.
Collapse
Affiliation(s)
- Shusuke Hashimoto
- Faculty of Textile Science and Technology, Shinshu University, Ueda, Japan
| | - Maki Yamazaki
- Faculty of Textile Science and Technology, Shinshu University, Ueda, Japan
| | - Hiroshi Uehara
- Faculty of Textile Science and Technology, Shinshu University, Ueda, Japan
- Morus Inc., Tokyo, Japan
| | - Shinya Yamazaki
- Department of Food Technology, Nagano Prefecture General Industrial Technology Center, Nagano, Japan
| | - Masakazu Kobayashi
- Faculty of Textile Science and Technology, Shinshu University, Ueda, Japan
| | - Takeshi Yokoyama
- Department of United Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Fuchu, Japan
| | - Kenjiro Yazawa
- Faculty of Textile Science and Technology, Shinshu University, Ueda, Japan
| | - Kunihiro Shiomi
- Faculty of Textile Science and Technology, Shinshu University, Ueda, Japan
| |
Collapse
|
2
|
Waizumi R, Tsubota T, Jouraku A, Kuwazaki S, Yokoi K, Iizuka T, Yamamoto K, Sezutsu H. Highly accurate genome assembly of an improved high-yielding silkworm strain, Nichi01. G3 (BETHESDA, MD.) 2023; 13:jkad044. [PMID: 36814357 PMCID: PMC10085791 DOI: 10.1093/g3journal/jkad044] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2022] [Revised: 01/23/2023] [Accepted: 02/14/2023] [Indexed: 02/24/2023]
Abstract
The silkworm (Bombyx mori) is an important lepidopteran model insect and an industrial domestic animal traditionally used for silk production. Here, we report the genome assembly of an improved Japanese strain Nichi01, in which the cocoon yield is comparable to that of commercial silkworm strains. The integration of PacBio Sequel II long-read and ddRAD-seq-based high-density genetic linkage map achieved the highest quality genome assembly of silkworms to date; 22 of the 28 pseudomolecules contained telomeric repeats at both ends, and only four gaps were present in the assembly. A total of 452 Mbp of the assembly with an N50 of 16.614 Mbp covered 99.3% of the complete orthologs of the lepidopteran core genes. Although the genome sequence of Nichi01 and that of the previously reported low-yielding tropical strain p50T assured their accuracy in most regions, we corrected several regions, misassembled in p50T, in our assembly. A total of 18,397 proteins were predicted using over 95 Gb of mRNA-seq derived from 10 different organs, covering 96.9% of the complete orthologs of the lepidopteran core genes. The final assembly and annotation files are available in KAIKObase (https://kaikobase.dna.affrc.go.jp/index.html) along with a genome browser and BLAST searching service, which would facilitate further studies and the breeding of silkworms and other insects.
Collapse
Affiliation(s)
- Ryusei Waizumi
- Silkworm Research Group, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization (NARO), 1-2 Owashi, Tsukuba, Ibaraki 305-8634, Japan
| | - Takuya Tsubota
- Silkworm Research Group, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization (NARO), 1-2 Owashi, Tsukuba, Ibaraki 305-8634, Japan
| | - Akiya Jouraku
- Silkworm Research Group, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization (NARO), 1-2 Owashi, Tsukuba, Ibaraki 305-8634, Japan
| | - Seigo Kuwazaki
- Silkworm Research Group, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization (NARO), 1-2 Owashi, Tsukuba, Ibaraki 305-8634, Japan
| | - Kakeru Yokoi
- Silkworm Research Group, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization (NARO), 1-2 Owashi, Tsukuba, Ibaraki 305-8634, Japan
| | - Tetsuya Iizuka
- Silkworm Research Group, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization (NARO), 1-2 Owashi, Tsukuba, Ibaraki 305-8634, Japan
| | - Kimiko Yamamoto
- Silkworm Research Group, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization (NARO), 1-2 Owashi, Tsukuba, Ibaraki 305-8634, Japan
| | - Hideki Sezutsu
- Silkworm Research Group, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization (NARO), 1-2 Owashi, Tsukuba, Ibaraki 305-8634, Japan
| |
Collapse
|
3
|
Yamada N, Mise Y, Yonemura N, Uchino K, Zabelina V, Sezutsu H, Iizuka T, Tamura T. Abolition of egg diapause by ablation of suboesophageal ganglion in parental females is compatible with genetic engineering methods. JOURNAL OF INSECT PHYSIOLOGY 2022; 142:104438. [PMID: 36049569 DOI: 10.1016/j.jinsphys.2022.104438] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/23/2022] [Revised: 08/07/2022] [Accepted: 08/25/2022] [Indexed: 06/15/2023]
Abstract
Microinjection of genetic material into non-diapause eggs is required for genetic engineering of silkworms. Besides diapause could be useful for maintaining transgenic lines, a drawback of this technology is that most standard silkworm strains and experimental lines of interest produce diapausing eggs. Several approaches have been developed to abolish diapause but none are very efficient. Here, we investigated the ablation of the suboesophageal ganglion (SG) in female pupae, which is a source of the hormone required to trigger egg diapause, as a mean to abolish diapause. We showed that SG-ablation is a reliable method to produce nondiapause eggs. Additionally, the challenge associated with lower fecundity of females with SG ablation was resolved by injecting pilocarpine into the mated female. We also investigated the suitability of nondiapause eggs laid by SG-ablated females for transgenesis, targeted mutagenesis, and induction of parthenogenetic development. Our results demonstrated SG-ablation to be a useful and simple method for expanding the possibilities associated with genetic engineering in silkworms.
Collapse
Affiliation(s)
- Nobuto Yamada
- Division of Silk-Producing Insect Biotechnology, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, Tsukuba, Ibaraki 305-8634, Japan.
| | - Yoshiko Mise
- Division of Silk-Producing Insect Biotechnology, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, Tsukuba, Ibaraki 305-8634, Japan
| | - Naoyuki Yonemura
- Division of Silk-Producing Insect Biotechnology, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, Tsukuba, Ibaraki 305-8634, Japan
| | - Keiro Uchino
- Division of Silk-Producing Insect Biotechnology, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, Tsukuba, Ibaraki 305-8634, Japan
| | - Valeriya Zabelina
- Biology Center CAS, Institute of Entomology, Branisovska 31, 370 05 Ceské Budejovice, Czech Republic; Faculty of Science, University of South Bohemia, Branisovska 31, 370 05 Ceské Budejovice, Czech Republic
| | - Hideki Sezutsu
- Division of Silk-Producing Insect Biotechnology, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, Tsukuba, Ibaraki 305-8634, Japan
| | - Tetsuya Iizuka
- Division of Silk-Producing Insect Biotechnology, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, Tsukuba, Ibaraki 305-8634, Japan
| | - Toshiki Tamura
- Institute of Sericulture and Silk Science, Inashiki-gun, Ibaraki 300-0324, Japan
| |
Collapse
|
4
|
Baci GM, Cucu AA, Giurgiu AI, Muscă AS, Bagameri L, Moise AR, Bobiș O, Rațiu AC, Dezmirean DS. Advances in Editing Silkworms ( Bombyx mori) Genome by Using the CRISPR-Cas System. INSECTS 2021; 13:28. [PMID: 35055871 PMCID: PMC8777690 DOI: 10.3390/insects13010028] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/19/2021] [Revised: 12/18/2021] [Accepted: 12/23/2021] [Indexed: 12/12/2022]
Abstract
CRISPR (clustered regularly interspaced short palindromic repeats)-Cas (CRISPR-associated) represents a powerful genome editing technology that revolutionized in a short period of time numerous natural sciences branches. Therefore, extraordinary progress was made in various fields, such as entomology or biotechnology. Bombyx mori is one of the most important insects, not only for the sericulture industry, but for numerous scientific areas. The silkworms play a key role as a model organism, but also as a bioreactor for the recombinant protein production. Nowadays, the CRISPR-Cas genome editing system is frequently used in order to perform gene analyses, to increase the resistance against certain pathogens or as an imaging tool in B. mori. Here, we provide an overview of various studies that made use of CRISPR-Cas for B. mori genome editing, with a focus on emphasizing the high applicability of this system in entomology and biological sciences.
Collapse
Affiliation(s)
- Gabriela-Maria Baci
- Faculty of Animal Science and Biotechnology, University of Animal Sciences and Veterinary Medicine Cluj-Napoca, 400372 Cluj-Napoca, Romania; (G.-M.B.); (A.-A.C.); (A.-I.G.); (A.-S.M.); (L.B.); (O.B.); (D.S.D.)
| | - Alexandra-Antonia Cucu
- Faculty of Animal Science and Biotechnology, University of Animal Sciences and Veterinary Medicine Cluj-Napoca, 400372 Cluj-Napoca, Romania; (G.-M.B.); (A.-A.C.); (A.-I.G.); (A.-S.M.); (L.B.); (O.B.); (D.S.D.)
| | - Alexandru-Ioan Giurgiu
- Faculty of Animal Science and Biotechnology, University of Animal Sciences and Veterinary Medicine Cluj-Napoca, 400372 Cluj-Napoca, Romania; (G.-M.B.); (A.-A.C.); (A.-I.G.); (A.-S.M.); (L.B.); (O.B.); (D.S.D.)
| | - Adriana-Sebastiana Muscă
- Faculty of Animal Science and Biotechnology, University of Animal Sciences and Veterinary Medicine Cluj-Napoca, 400372 Cluj-Napoca, Romania; (G.-M.B.); (A.-A.C.); (A.-I.G.); (A.-S.M.); (L.B.); (O.B.); (D.S.D.)
| | - Lilla Bagameri
- Faculty of Animal Science and Biotechnology, University of Animal Sciences and Veterinary Medicine Cluj-Napoca, 400372 Cluj-Napoca, Romania; (G.-M.B.); (A.-A.C.); (A.-I.G.); (A.-S.M.); (L.B.); (O.B.); (D.S.D.)
| | - Adela Ramona Moise
- Faculty of Animal Science and Biotechnology, University of Animal Sciences and Veterinary Medicine Cluj-Napoca, 400372 Cluj-Napoca, Romania; (G.-M.B.); (A.-A.C.); (A.-I.G.); (A.-S.M.); (L.B.); (O.B.); (D.S.D.)
| | - Otilia Bobiș
- Faculty of Animal Science and Biotechnology, University of Animal Sciences and Veterinary Medicine Cluj-Napoca, 400372 Cluj-Napoca, Romania; (G.-M.B.); (A.-A.C.); (A.-I.G.); (A.-S.M.); (L.B.); (O.B.); (D.S.D.)
| | | | - Daniel Severus Dezmirean
- Faculty of Animal Science and Biotechnology, University of Animal Sciences and Veterinary Medicine Cluj-Napoca, 400372 Cluj-Napoca, Romania; (G.-M.B.); (A.-A.C.); (A.-I.G.); (A.-S.M.); (L.B.); (O.B.); (D.S.D.)
| |
Collapse
|
5
|
Zabelina V, Yonemura N, Uchino K, Iizuka T, Mochida Y, Takemura Y, Klymenko V, Sezutsu H, Sehnal F, Tamura T. Production of cloned transgenic silkworms by breeding non-diapausing parthenogenetic strains. JOURNAL OF INSECT PHYSIOLOGY 2021; 132:104265. [PMID: 34097982 DOI: 10.1016/j.jinsphys.2021.104265] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/17/2021] [Revised: 06/01/2021] [Accepted: 06/02/2021] [Indexed: 06/12/2023]
Abstract
Clonal transgenic silkworms are useful for the functional analysis of insect genes and for the production of recombinant proteins. Such silkworms have previously been created using an existing ameiotic parthenogenetic strain. However, the process was labor intensive, and the efficiency of producing transgenic silkworms was very low. To overcome this issue, we developed a more convenient and efficient method by breeding non-diapausing parthenogenetic strains. The strains produced non-diapausing eggs only when the embryogenesis of the parent eggs was performed at low temperatures, which could then be used for injecting vector plasmids. This demonstrated that transgenic silkworms could be produced with greater ease and efficiency. To breed the strains, we crossed the existing parthenogenetic strains with bivoltine strains and made F1 and F2 from each cross. Then we selected the silkworms whose eggs have a high ability of parthenogenesis and became non-diapausing. We also demonstrated that the germplasm could be cryopreserved in liquid nitrogen. Thus, this method increases the efficiency and ease of using genetically engineered silkworms to analyze gene function and produce recombinant proteins, potentially impacting various industries.
Collapse
Affiliation(s)
- Valeriya Zabelina
- Institute of Agrobiological Sciences, NARO, Tsukuba, Ibaraki 305-8634, Japan
| | - Naoyuki Yonemura
- Institute of Agrobiological Sciences, NARO, Tsukuba, Ibaraki 305-8634, Japan
| | - Keiro Uchino
- Institute of Agrobiological Sciences, NARO, Tsukuba, Ibaraki 305-8634, Japan
| | - Tetsuya Iizuka
- Institute of Agrobiological Sciences, NARO, Tsukuba, Ibaraki 305-8634, Japan
| | - Yuji Mochida
- Institute of Sericulture, Iikura 1053, 300-0324 Ami-machi, Ibaraki, Japan
| | - Yoko Takemura
- Institute of Sericulture, Iikura 1053, 300-0324 Ami-machi, Ibaraki, Japan
| | | | - Hideki Sezutsu
- Institute of Agrobiological Sciences, NARO, Tsukuba, Ibaraki 305-8634, Japan
| | | | - Toshiki Tamura
- Institute of Sericulture, Iikura 1053, 300-0324 Ami-machi, Ibaraki, Japan.
| |
Collapse
|