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Díaz-Guerrero MÁ, Castillo-Juárez I, Zurabian R, Valdez A, Kota K, Hoshiko Y, Ramesh E, Martínez-Vazquez M, Ceapă CD, Hernandez-Garnica M, Cadet F, García-Contreras R. Reviving the past for a healthier future: ancient molecules and remedies as a solution to the antibiotic crisis. Future Microbiol 2025; 20:429-441. [PMID: 40099865 PMCID: PMC11980515 DOI: 10.1080/17460913.2025.2476290] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2024] [Accepted: 03/04/2025] [Indexed: 03/20/2025] Open
Abstract
Options to combat bacterial infections are becoming scarce. We require innovative approaches to enhance the discovery of effective antimicrobials capable of combating bacteria resistant to multiple or all antibiotics. These methods should either directly eliminate resistant bacteria or indirectly influence their viability by inhibiting their virulence or reducing their resistance to antibiotics. One interesting approach is to analyze ancient remedies used to treat bacterial infections, formulate them, and test them against modern microbes. This field has recently been named "ancientbiotics." This approach allows us to leverage centuries of empirical knowledge accumulated, from traditional medicines across various ancient cultures worldwide. The strategy has already yielded promising formulations to combat the ESKAPE group of nosocomial pathogens. Additionally, molecular de-extinction, which involves genome analysis of extinct species to search for useful antimicrobials, such as peptides, offers another avenue. In this review, we compile the antimicrobial effects of ancient remedies and de-extinct molecules known to modern science and discuss possible new strategies to further harness the potential of past remedies and molecules to fight the rise of superbugs.
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Affiliation(s)
| | - Israel Castillo-Juárez
- Conahcyt-Instituto de Ciencias Básicas e Ingeniería, Universidad Autónoma del Estado de Hidalgo, Mineral de la Reforma, Hidalgo, México
| | - Rimma Zurabian
- Departamento de Microbiología y Parasitología, Facultad de Medicina, UNAM, Mexico City, Mexico
| | - Alejandra Valdez
- Laboratorio de Interacciones Microbianas, Planta Piloto de Procesos Industriales Microbiológicos, PROIMI, CONICET, San Miguel de Tucumán, Tucumán, Argentina
- Facultad de Bioquímica, Química y Farmacia, Universidad Nacional de Tucumán, San Miguel de Tucumán, Argentina
| | - Kokila Kota
- Department of Biology, Ramapo College of New Jersey, Mahwah, NJ, USA
| | - Yuki Hoshiko
- Department of Health Science, School of Allied Health Sciences, Kitasato University, Sagamihara, Japan
| | - Ekaprana Ramesh
- Department of Biology, Ramapo College of New Jersey, Mahwah, NJ, USA
| | | | - Corina Diana Ceapă
- Laboratory of Microbiology, Institute of Chemistry, National Autonomous University of Mexico, Mexico City, Mexico
| | | | - Frederic Cadet
- PEACCEL, Artificial Intelligence Department, AI for Biologics, Paris, France
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Zhang Z, Hao G, Kang Z. Characterization of the complete chloroplast genome of Eutrema deltoideum (Brassicaceae). Mitochondrial DNA B Resour 2024; 9:512-516. [PMID: 38623178 PMCID: PMC11018055 DOI: 10.1080/23802359.2024.2338560] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2023] [Accepted: 03/31/2024] [Indexed: 04/17/2024] Open
Abstract
Eutrema deltoideum (Hook. f. et Thoms.) has been recognized as a potentially important vegetable and medicinal resource. In this study, we present the complete chloroplast genome of E. deltoideum and conduct a phylogenetic analysis. The chloroplast genome is 154,051 bp long and consists of a large single-copy (LSC) region of 84,149 bp, two inverted repeat (IR) regions of 26,065 bp each, and a small single-copy (SSC) region of 17,772 bp. It contains 132 complete genes, including 87 protein-coding genes, 8 ribosomal RNA genes, and 37 tRNA genes. Additionally, we identified 78 simple sequence repeats (SSRs). The phylogenetic tree reveals that E. deltoideum is closely related to E. heterophyllum, and the Eutrema genus is monophyletic. This study provides valuable information about E. deltoideum and enhances our understanding of its taxonomic classification.
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Affiliation(s)
- Zilu Zhang
- School of Bioengineering, Sichuan University of Science & Engineering, Yibin, China
| | - Guoqian Hao
- Faculty of Agriculture, Forestry and Food Engineering, Yibin University, Yibin, China
| | - Zhenhui Kang
- School of Bioengineering, Sichuan University of Science & Engineering, Yibin, China
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