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Plikusiene I, Balevicius Z, Ramanaviciene A, Talbot J, Mickiene G, Balevicius S, Stirke A, Tereshchenko A, Tamosaitis L, Zvirblis G, Ramanavicius A. Evaluation of affinity sensor response kinetics towards dimeric ligands linked with spacers of different rigidity: Immobilized recombinant granulocyte colony-stimulating factor based synthetic receptor binding with genetically engineered dimeric analyte derivatives. Biosens Bioelectron 2020; 156:112112. [PMID: 32174551 DOI: 10.1016/j.bios.2020.112112] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2019] [Revised: 02/16/2020] [Accepted: 02/18/2020] [Indexed: 10/24/2022]
Abstract
The modelling of protein-protein binding kinetics is important for the development of affinity-sensors and the prediction of signaling protein based drug efficiency. Therefore, in this research we have evaluated the binding kinetics of several genetically designed protein models: (i) three different ligands based on granulocyte colony-stimulating factor GCSF homo-dimeric derivatives linked by differed by linkers of different length and flexibility; (ii) an antibody-like receptor (GCSF-R) based on two GCSF-receptor sites immobilized to Fc domains, which are common parts of protein structures forming antibodies. Genetically engineered GCSF-R is similar to an antibody because it, like the antibody, has two binding sites, which both selectively bind with GCSF ligands. To design the affinity sensor model studied here, GCSF-R was immobilized on a thin gold layer via self-assembled monolayer conjugated with Protein-G. Binding kinetics between immobilized GCSF-R and all three different recombinant GCSF-based homo-dimeric derivatives were evaluated by total internal reflection ellipsometry. Association constants were determined by fitting mathematical models to the experimental data. It was clearly observed that both (i) affinity and (ii) binding kinetics depend on the length and flexibility of the linker that connects both domains of a GCSF-based ligand. The fastest association between immobilized GCSF-R and GCSF-based ligands was observed for ligands whose GCSF domains were interconnected by the longest and the most flexible linker. Here we present ellipsometry-based measurements and models of the interaction kinetics that advance the understanding of bidentate-receptor-based immunosensor action and enables us to predict the optimal linker structure for the design of GCSF-based medications.
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Affiliation(s)
- Ieva Plikusiene
- Laboratory of Nanotechnology, State Research Institute Center for Physical Sciences and Technology, Vilnius, Lithuania; Department of Physical Chemistry, Institute of Chemistry, Faculty of Chemistry and Geosciences, Vilnius University, Naugarduko 24, Vilnius, Lithuania
| | - Zigmas Balevicius
- Laboratory of Nanotechnology, State Research Institute Center for Physical Sciences and Technology, Vilnius, Lithuania; Faculty of Electronics, Vilnius Gediminas Technical University, Naugarduko 41, 03227, Vilnius, Lithuania
| | - Almira Ramanaviciene
- NanoTechnas - Centre of Nanotechnology and Materials Science, Vilnius University, Naugarduko 24, Vilnius, Lithuania
| | - Julian Talbot
- CNRS, Laboratoire de Physique Théorique de la Matière Condensée, Sorbonne Université, France
| | - Gitana Mickiene
- Life Sciences Center, Vilnius University, Sauletekio ave. 7, 10257, Vilnius, Lithuania
| | - Saulius Balevicius
- Laboratory of Nanotechnology, State Research Institute Center for Physical Sciences and Technology, Vilnius, Lithuania
| | - Arunas Stirke
- Laboratory of Nanotechnology, State Research Institute Center for Physical Sciences and Technology, Vilnius, Lithuania
| | - Alla Tereshchenko
- Department of Physical Chemistry, Institute of Chemistry, Faculty of Chemistry and Geosciences, Vilnius University, Naugarduko 24, Vilnius, Lithuania; Department of Experimental Physics, Faculty of Mathematics, Physics and Information Technologies, Odesa National I.I. Mechnikov University, Odesa, Ukraine
| | - Linas Tamosaitis
- Department of Physical Chemistry, Institute of Chemistry, Faculty of Chemistry and Geosciences, Vilnius University, Naugarduko 24, Vilnius, Lithuania
| | - Gintautas Zvirblis
- Life Sciences Center, Vilnius University, Sauletekio ave. 7, 10257, Vilnius, Lithuania
| | - Arunas Ramanavicius
- Laboratory of Nanotechnology, State Research Institute Center for Physical Sciences and Technology, Vilnius, Lithuania; Department of Physical Chemistry, Institute of Chemistry, Faculty of Chemistry and Geosciences, Vilnius University, Naugarduko 24, Vilnius, Lithuania.
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Mickiene G, Dalgediene I, Dapkunas Z, Zvirblis G, Pesliakas H, Kaupinis A, Valius M, Mistiniene E, Pleckaityte M. Construction, Purification, and Characterization of a Homodimeric Granulocyte Colony-Stimulating Factor. Mol Biotechnol 2018; 59:374-384. [PMID: 28721592 DOI: 10.1007/s12033-017-0026-7] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Granulocyte colony-stimulating factor (G-CSF) has found widespread clinical application, and modified forms with improved biopharmaceutical properties have been marketed as well. PEGylation, the covalent modification of G-CSF with polyethylene glycol (PEG), has a beneficial effect on drug properties, but there are concerns connected to the immunogenicity of PEGylated compounds and bioaccumulation of the synthetic polymer. To overcome challenges connected with chemical modifications, we developed fusion proteins composed of two G-CSF molecules connected via different peptide linkers. Three different homodimeric G-CSF proteins were purified, and their in vitro and in vivo activities were determined. A G-CSF dimer, GCSF-Lα, was constructed using an alpha-helix-forming peptide linker, and it demonstrated an extended half-life in serum with a stronger neutrophil response as compared to the monomeric G-CSF protein. The GCSF-Lα protein, therefore, might be selected for further studies as a potential drug candidate.
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Affiliation(s)
- Gitana Mickiene
- Institute of Biotechnology, Vilnius University, Sauletekio al. 7, 10257, Vilnius, Lithuania.,Profarma UAB, V.A. Graiciuno 6, 02241, Vilnius, Lithuania
| | - Indre Dalgediene
- Institute of Biotechnology, Vilnius University, Sauletekio al. 7, 10257, Vilnius, Lithuania
| | - Zilvinas Dapkunas
- Institute of Biotechnology, Vilnius University, Sauletekio al. 7, 10257, Vilnius, Lithuania.,Profarma UAB, V.A. Graiciuno 6, 02241, Vilnius, Lithuania
| | - Gintautas Zvirblis
- Institute of Biotechnology, Vilnius University, Sauletekio al. 7, 10257, Vilnius, Lithuania.,Profarma UAB, V.A. Graiciuno 6, 02241, Vilnius, Lithuania
| | | | - Algirdas Kaupinis
- Institute of Biochemistry, Vilnius University, Sauletekio al. 7, 10257, Vilnius, Lithuania
| | - Mindaugas Valius
- Institute of Biochemistry, Vilnius University, Sauletekio al. 7, 10257, Vilnius, Lithuania
| | | | - Milda Pleckaityte
- Institute of Biotechnology, Vilnius University, Sauletekio al. 7, 10257, Vilnius, Lithuania.
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Vemula S, Dedaniya A, Thunuguntla R, Mallu MR, Parupudi P, Ronda SR. Simplified in vitro refolding and purification of recombinant human granulocyte colony stimulating factor using protein folding cation exchange chromatography. J Chromatogr A 2014; 1379:74-82. [PMID: 25576039 DOI: 10.1016/j.chroma.2014.12.057] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2014] [Revised: 12/09/2014] [Accepted: 12/18/2014] [Indexed: 02/05/2023]
Abstract
Protein folding-strong cation exchange chromatography (PF-SCX) has been employed for efficient refolding with simultaneous purification of recombinant human granulocyte colony stimulating factor (rhG-CSF). To acquire a soluble form of renatured and purified rhG-CSF, various chromatographic conditions, including the mobile phase composition and pH was evaluated. Additionally, the effects of additives such as urea, amino acids, polyols, sugars, oxidizing agents and their amalgamations were also investigated. Under the optimal conditions, rhG-CSF was efficaciously solubilized, refolded and simultaneously purified by SCX in a single step. The experimental results using ribose (2.0M) and arginine (0.6M) combination were found to be satisfactory with mass yield, purity and specific activity of 71%, ≥99% and 2.6×10(8)IU/mg respectively. Through this investigation, we concluded that the SCX refolding method was more efficient than conventional methods which has immense potential for the large-scale production of purified rhG-CSF.
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Affiliation(s)
- Sandeep Vemula
- K L E F University, Centre for Bioprocess Technology, Department of Biotechnology, Guntur 522 502, Andhra Pradesh, India
| | - Akshay Dedaniya
- K L E F University, Centre for Bioprocess Technology, Department of Biotechnology, Guntur 522 502, Andhra Pradesh, India
| | - Rahul Thunuguntla
- K L E F University, Centre for Bioprocess Technology, Department of Biotechnology, Guntur 522 502, Andhra Pradesh, India
| | - Maheswara Reddy Mallu
- K L E F University, Centre for Bioprocess Technology, Department of Biotechnology, Guntur 522 502, Andhra Pradesh, India
| | - Pavani Parupudi
- Andhra University, College of Engineering, Visakhapatnam 530 003, Andhra Pradesh, India
| | - Srinivasa Reddy Ronda
- K L E F University, Centre for Bioprocess Technology, Department of Biotechnology, Guntur 522 502, Andhra Pradesh, India.
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Bade PD, Kotu SP, Rathore AS. Optimization of a refolding step for a therapeutic fusion protein in the quality by design (QbD) paradigm. J Sep Sci 2012; 35:3160-9. [DOI: 10.1002/jssc.201200476] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2012] [Revised: 07/09/2012] [Accepted: 07/11/2012] [Indexed: 11/12/2022]
Affiliation(s)
- Pratap D. Bade
- Department of Chemical Engineering; Indian Institute of Technology Delhi; Hauz Khas New Delhi India
| | - Susmitha P. Kotu
- Department of Chemical Engineering; Indian Institute of Technology Delhi; Hauz Khas New Delhi India
| | - Anurag S. Rathore
- Department of Chemical Engineering; Indian Institute of Technology Delhi; Hauz Khas New Delhi India
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Expression of recombinant human mutant granulocyte colony stimulating factor (Nartograstim) in Escherichia coli. World J Microbiol Biotechnol 2012; 28:2593-600. [PMID: 22806165 DOI: 10.1007/s11274-012-1068-4] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2012] [Accepted: 04/20/2012] [Indexed: 10/28/2022]
Abstract
The human granulocyte colony stimulating factor (hG-CSF) plays an important role in hematopoietic cell proliferation/differentiation and has been widely used as a therapeutic agent for treating neutropenias. Nartograstim is a commercial G-CSF that presents amino acid changes in specific positions when compared to the wild-type form, which potentially increase its activity and stability. The aim of this work was to develop an expression system in Escherichia coli that leads to the production of large amounts of a recombinant hG-CSF (rhG-CSF) biosimilar to Nartograstim. The nucleotide sequence of hg-csf was codon-optimized for expression in E. coli. As a result, high yields of the recombinant protein were obtained with adequate purity, structural integrity and biological activity. This protein has also been successfully used for the production of specific polyclonal antibodies in mice, which could be used in the control of the expression and purification in an industrial production process of this recombinant protein. These results will allow the planning of large-scale production of this mutant version of hG-CSF (Nartograstim), as a potential new biosimilar in the market.
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Yamamoto A, Iwata A, Saito T, Watanabe F, Ueda S. Expression and purification of canine granulocyte colony-stimulating factor (cG-CSF). Vet Immunol Immunopathol 2009; 130:221-5. [PMID: 19339059 DOI: 10.1016/j.vetimm.2009.02.016] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2008] [Revised: 01/20/2009] [Accepted: 02/16/2009] [Indexed: 11/16/2022]
Abstract
Canine granulocyte colony-stimulating factor (cG-CSF) with modification of cysteine at position 17 to serine was expressed in Brevibacillus choshinensis HPD31. cG-CSF secreted into the culture medium was purified by ammonium sulfate precipitation and consecutive column chromatography, using butyl sepharose and DEAE sepharose. Biological activity of the recombinant cG-CSF was 8.0 x 10(6) U/mg protein, as determined by its stimulatory effect on NFS-60 cell proliferation. Purified cG-CSF was subcutaneously administered once a day for two successive days to dogs (1, 5, 25, or 125 microg). Neutrophil count increased the following day in all dogs except those administered the lowest dose (1 microg). No severe side effects were observed in dogs after administration of cG-CSF.
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Affiliation(s)
- Akira Yamamoto
- Nippon Institute for Biological Science, Shin-Machi 9-2221-1, Ome, Tokyo 198-0024, Japan.
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Rao Dasari VK, Are D, Rao Joginapally V, Mangamoori LN, Rao Adibhatla KSB. Optimization of the downstream process for high recovery of rhG-CSF from inclusion bodies expressed in Escherichia coli. Process Biochem 2008. [DOI: 10.1016/j.procbio.2008.01.024] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Jevsevar S, Gaberc-Porekar V, Fonda I, Podobnik B, Grdadolnik J, Menart V. Production of nonclassical inclusion bodies from which correctly folded protein can be extracted. Biotechnol Prog 2005; 21:632-9. [PMID: 15801811 DOI: 10.1021/bp0497839] [Citation(s) in RCA: 128] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Human granulocyte-colony stimulating factor (hG-CSF), an important biopharmaceutical drug used in oncology, is currently produced mainly in Escherichia coli. Expression of human hG-CSF gene in E. coli is very low, and therefore a semisynthetic, codon-optimized hG-CSF gene was designed and subcloned into pET expression plasmids. This led to a yield of over 50% of the total cellular proteins. We designed a new approach to biosynthesis at low temperature, enabling the formation of "nonclassical" inclusion bodies from which correctly folded protein can be readily extracted by nondenaturing solvents, such as mild detergents or low concentrations of polar solvents such as DMSO and nondetergent sulfobetaines. FT-IR analysis confirmed different nature of inclusion bodies with respect to the growth temperature and indicated presence of high amounts of very likely correctly folded reduced hG-CSF in nonclassical inclusion bodies. The yield of correctly folded, functional hG-CSF obtained in this way exceeded 40% of the total hG-CSF produced in the cells and is almost completely extractable under nondenaturing conditions. The absence of the need to include a denaturation/renaturation step in the purification process allows the development of more efficient processes characterized by higher yields and lower costs and involving environment-friendly technologies. The technology presented works successfully at the 50-L scale, producing nonclassical inclusion bodies of the same quality. The approach developed for the production of hG-CSF could be extended to other proteins; thus, a broader potential for industrial exploitation is envisaged.
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Affiliation(s)
- Simona Jevsevar
- Lek Pharmaceuticals d.d., Verovskova 57, SI-1000 Ljubljana, Slovenia.
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Abstract
Overexpression of cloned or synthetic genes in Escherichia coli often results in the formation of insoluble protein inclusion bodies. Within the last decade, specific methods and strategies have been developed for preparing active recombinant proteins from these inclusion bodies. Usually, the inclusion bodies can be separated easily from other cell components by centrifugation, solubilized by denaturants such as guanidine hydrochloride (Gdn-HCl) or urea, and then renatured through a refolding process such as dilution or dialysis. Recent improvements in renaturation procedures have included the inhibition of aggregation during refolding by application of low molecular weight additives and matrix-bound renaturation. These methods have made it possible to obtain high yields of biologically active proteins by taking into account process parameters such as protein concentration, redox conditions, temperature, pH, and ionic strength.
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Affiliation(s)
- S Misawa
- Pharmaceutical and Biotechnology Laboratory, Japan Energy Corporation, 3-17-35 Niizo-Minami, Toda-shi, Saitama 335-8502, Japan.
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Aritomi M, Kunishima N, Okamoto T, Kuroki R, Ota Y, Morikawa K. Atomic structure of the GCSF-receptor complex showing a new cytokine-receptor recognition scheme. Nature 1999; 401:713-7. [PMID: 10537111 DOI: 10.1038/44394] [Citation(s) in RCA: 106] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Granulocyte colony-stimulating factor (GCSF) is the principal growth factor regulating the maturation, proliferation and differentiation of the precursor cells of neutrophilic granulocytes and is used to treat neutropenia. GCSF is a member of the long-chain subtype of the class 1 cytokine superfamily, which includes growth hormone, erythropoietin, interleukin 6 and oncostatin M. Here we have determined the crystal structure of GCSF complexed to the BN-BC domains, the principal ligand-binding region of the GCSF receptor (GCSFR). The two receptor domains form a complex in a 2:2 ratio with the ligand, with a non-crystallographic pseudo-twofold axis through primarily the interdomain region and secondarily the BC domain. This structural view of a gp130-type receptor-ligand complex presents a new molecular basis for cytokine-receptor recognition.
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Affiliation(s)
- M Aritomi
- Biomolecular Engineering Research Institute, Suita-city, Osaka, Japan
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