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Jütte L, Sharma G, Patel H, Roth B. Registration of polarimetric images for in vivo skin diagnostics. JOURNAL OF BIOMEDICAL OPTICS 2022; 27:096001. [PMID: 36042549 PMCID: PMC9424913 DOI: 10.1117/1.jbo.27.9.096001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/02/2022] [Accepted: 08/12/2022] [Indexed: 06/15/2023]
Abstract
SIGNIFICANCE Mueller matrix (MM) polarimetry is a promising tool for the detection of skin cancer. Polarimetric in vivo measurements often suffer from misalignment of the polarimetric images due to motion, which can lead to false results. AIM We aim to provide an easy-to-implement polarimetric image data registration method to ensure proper image alignment. APPROACH A feature-based image registration is implemented for an MM polarimeter for phantom and in vivo human skin measurements. RESULTS We show that the keypoint-based registration of polarimetric images is necessary for in vivo skin polarimetry to ensure reliable results. Further, we deliver an efficient semiautomated method for the registration of polarimetric images. CONCLUSIONS Image registration for in vivo polarimetry of human skin is required for improved diagnostics and can be efficiently enhanced with a keypoint-based approach.
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Affiliation(s)
- Lennart Jütte
- Leibniz University Hannover, Hannover Centre for Optical Technologies, Hannover, Germany
| | - Gaurav Sharma
- Leibniz University Hannover, Hannover Centre for Optical Technologies, Hannover, Germany
| | - Harshkumar Patel
- Leibniz University Hannover, Hannover Centre for Optical Technologies, Hannover, Germany
| | - Bernhard Roth
- Leibniz University Hannover, Hannover Centre for Optical Technologies, Hannover, Germany
- Leibniz University Hannover, Cluster of Excellence PhoenixD, Hannover, Germany
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Chen H, He Y, Wei L, Yang J, Li X, Shi G, Zhang Y. Polynomial transformation model for frame-to-frame registration in an adaptive optics confocal scanning laser ophthalmoscope. BIOMEDICAL OPTICS EXPRESS 2019; 10:4589-4606. [PMID: 31565511 PMCID: PMC6757461 DOI: 10.1364/boe.10.004589] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2019] [Revised: 07/21/2019] [Accepted: 07/23/2019] [Indexed: 05/14/2023]
Abstract
The adaptive optics (AO) technique has been integrated in confocal scanning laser ophthalmoscopy (SLO) to obtain near diffraction-limited high-resolution retinal images. However, the quality of AOSLO images is decreased by various sources of noise and fixational eye movements. To improve image quality and remove distortions in AOSLO images, the multi-frame averaging method is usually utilized, which relies on an accurate image registration. The goal of image registrations is finding the optimal transformation to best align the input image sequences. However, current methods for AOSLO image registration have some obvious defects due to the limitation of transformation models. In this paper, we first established the retina motion model by using the Taylor series and polynomial expansion. Then we generated the polynomial transformation model and provided its close-form solution for consecutively frame-to-frame AOSLO retina image registration, allowing one to consider more general retinal motions such as scale changes, shearing and rotation motions, and so on. The experimental results demonstrated that higher-order polynomial transformation models are helpful to achieve more accurate registration, and the fourth-order polynomial transformation model is preferred to accomplish an efficient registration with a satisfying computational complexity. In addition, the AKAZE feature detection method was adopted and improved to achieve more accurate image registrations, and a new strategy was validated to exclude those unsuccessful registered regions to promote the robustness of image registration.
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Affiliation(s)
- Hao Chen
- The Key Laboratory on Adaptive Optics, Institute of Optics and Electronics, No. 1 Guangdian Avenue, Chengdu, 610207, China
- College of Materials Science and Opto-Electronic Technology, University of Chinese Academy of Sciences, No. 19 (A) Yuquan Road, Beijing, 100049, China
| | - Yi He
- The Key Laboratory on Adaptive Optics, Institute of Optics and Electronics, No. 1 Guangdian Avenue, Chengdu, 610207, China
- Jiangsu Key Laboratory of Medical Optics, Suzhou, Jiangsu, 215163, China
- Suzhou Institute of Biomedical Engineering and Technology, Chinese Academy of Sciences, No. 88 Keling Road, Suzhou, 215163, China
| | - Ling Wei
- The Key Laboratory on Adaptive Optics, Institute of Optics and Electronics, No. 1 Guangdian Avenue, Chengdu, 610207, China
| | - Jinsheng Yang
- The Key Laboratory on Adaptive Optics, Institute of Optics and Electronics, No. 1 Guangdian Avenue, Chengdu, 610207, China
| | - Xiqi Li
- The Key Laboratory on Adaptive Optics, Institute of Optics and Electronics, No. 1 Guangdian Avenue, Chengdu, 610207, China
| | - Guohua Shi
- Jiangsu Key Laboratory of Medical Optics, Suzhou, Jiangsu, 215163, China
- Suzhou Institute of Biomedical Engineering and Technology, Chinese Academy of Sciences, No. 88 Keling Road, Suzhou, 215163, China
| | - Yudong Zhang
- The Key Laboratory on Adaptive Optics, Institute of Optics and Electronics, No. 1 Guangdian Avenue, Chengdu, 610207, China
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Denniss J, Schiessl I, Nourrit V, Fenerty CH, Gautam R, Henson DB. Relationships between visual field sensitivity and spectral absorption properties of the neuroretinal rim in glaucoma by multispectral imaging. Invest Ophthalmol Vis Sci 2011; 52:8732-8. [PMID: 21980002 DOI: 10.1167/iovs.11-8302] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022] Open
Abstract
PURPOSE To investigate the relationship between neuroretinal rim (NRR) differential light absorption (DLA, a measure of spectral absorption properties) and visual field (VF) sensitivity in primary open-angle glaucoma (POAG). METHODS Patients diagnosed with (n = 22) or suspected of having (n = 7) POAG were imaged with a multispectral system incorporating a modified digital fundus camera, 250-W tungsten-halogen lamp, and fast-tuneable liquid crystal filter. Five images were captured sequentially within 1.0 second at wavelengths selected according to absorption properties of hemoglobin (range, 570-610 nm), and a Beer-Lambert law model was used to produce DLA maps of residual NRR from the images. Patients also underwent VF testing. Differences in NRR DLA in vertically opposing 180° and 45° sectors either side of the horizontal midline were compared with corresponding differences in VF sensitivity on both decibel and linear scales by Spearman's rank correlation. RESULTS The decibel VF sensitivity scale showed significant relationships between superior-inferior NRR DLA difference and sensitivity differences between corresponding VF areas in 180° NRR sectors (Spearman ρ = 0.68; P < 0.0001), superior-/inferior-temporal 45° NRR sectors (ρ = 0.57; P < 0.002), and superior-/inferior-nasal 45° NRR sectors (ρ = 0.59; P < 0.001). Using the linear VF sensitivity scale significant relationships were found for 180° NRR sectors (ρ = 0.62; P < 0.0002) and superior-inferior-nasal 45° NRR sectors (ρ = 0.53; P < 0.002). No significant difference was found between correlations using the linear or decibel VF sensitivity scales. CONCLUSIONS Residual NRR DLA is related to VF sensitivity in POAG. Multispectral imaging may provide clinically important information for the assessment and management of POAG.
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Affiliation(s)
- Jonathan Denniss
- Faculty of Life Sciences, University of Manchester, Manchester, United Kingdom
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Meitav N, Ribak EN. Improving retinal image resolution with iterative weighted shift-and-add. JOURNAL OF THE OPTICAL SOCIETY OF AMERICA. A, OPTICS, IMAGE SCIENCE, AND VISION 2011; 28:1395-1402. [PMID: 21734738 DOI: 10.1364/josaa.28.001395] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
High-resolution retinal imaging requires dilating the pupil, and therefore exposing more aberrations that blur the image. We developed an image processing technique that takes advantage of the natural movement of the eye to average out some of the high-order aberrations and to oversample the retina. This method was implemented on a long sequence of retinal images of subjects with normal vision. We were able to resolve the structures of the size of single cells in the living human retina. The improvement of resolution is independent of the acquisition method, as long as the image is not warped during scanning. Consequently, even better results can be expected by implementing this technique on higher-resolution images.
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Affiliation(s)
- Nizan Meitav
- Department of Physics, Technion–Israel Institute of Technology, Haifa 32000, Israel
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Faisan S, Lara D, Paterson C. Scanning ophthalmoscope retinal image registration using one-dimensional deformation fields. OPTICS EXPRESS 2011; 19:4157-69. [PMID: 21369245 DOI: 10.1364/oe.19.004157] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
We present a new, robust and automated method for registering sequences of images acquired from scanning ophthalmoscopes. The method uses a multi-scale B-spline representation of the deformation field to map images to each other and an hierarchical optimization method. We applied the method to video sequences acquired from different parts of the retina. In all cases, the registration was successful, even in the presence of large distortions from microsaccades, and the resulting deformation fields describe the fixational motion of the eye. The registration reveals examples of dynamic photoreceptor behaviour in the sequences.
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Affiliation(s)
- S Faisan
- LSIIT UMR-CNRS-UDS 7005, Pôle API, Bd Sébastien Brant, 67400 Illkirch, France
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Nourrit V, Denniss J, Muqit M, Schiessl I, Fenerty C, Stanga P, Henson D. High-resolution hyperspectral imaging of the retina with a modified fundus camera. J Fr Ophtalmol 2010; 33:686-92. [DOI: 10.1016/j.jfo.2010.10.010] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2010] [Accepted: 09/28/2010] [Indexed: 10/18/2022]
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Devlaminck V, Terrier P. Geodesic distance on non-singular coherency matrix space in polarization optics. JOURNAL OF THE OPTICAL SOCIETY OF AMERICA. A, OPTICS, IMAGE SCIENCE, AND VISION 2010; 27:1756-1763. [PMID: 20686579 DOI: 10.1364/josaa.27.001756] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
We define a geodesic distance associated with the polarization space of non-singular coherency matrices. Its introduction on HPD(2) (the manifold of Hermitian positive definite matrices of dimension 2) can be directly related to the Jones calculus. The expression of distance and related notion of mean value in this particular metric space are also presented. We investigate the properties of this geodesic distance and the classical Euclidean one and their appropriateness for interpixel comparisons in a context of imaging polarimetry. Finally, results are presented for a geodesic version of the classical K-means clustering algorithm with simulated data and real data. The results demonstrate the advantages of the geodesic approach.
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Affiliation(s)
- V Devlaminck
- LAGIS-FRE CNRS 3303 Université Lille 1, Sciences et Technologies, Lille 59655, France.
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