Structured illumination phase and fluorescence microscopy for bioimaging

Generalized computational framework for phase image reconstruction in structured illumination digital holographic microscopy

Correct demodulation and phase compensation are integral in digital holographic microscopy (DHM) with structured illumination (SI), i.e., SI-DHM, to reconstruct super-resolved phase images from raw SI-DHM holograms. The overall performance of the SI-DHM system depends heavily on the computational reconstruction framework utilized. This work presents a generalized reconstruction framework for SI-DHM that automatically demodulates the two laterally shifted object spectrums without prior knowledge of the phase shifts between the recorded holograms and automatically compensates for the linear phase term of each shifted object spectrum. The proposed framework reconstructs super-resolved phase images along one lateral direction with minimum inputs from the user, only requiring the two recorded phase-shifted holograms, the pixel size, and the source's wavelength. The framework's performance has been validated using simulated and experimental holograms recorded using an SI-DHM system for two different lateral modulation frequencies of the structured pattern, demonstrating its versatility and effectiveness in reconstructing super-resolved phase images.

Highly focused beam generated with a height tuned micro-optical structure for high contrast microscopic imaging

Light sheet illumination technology improves the signal-to-noise ratio, resolution, and reduces scattered backgrounds for biological microscopic detection system. Here, we developed a novel micro-optical structure to produce a focused and uniform beam for the enhancement of imaging contrast. The beam intensity and working distance can be modified by adjusting the height and period of the structure. Our experiments successfully recorded structured light illumination, demonstrating the ability of the structure to capture high-contrast imaging data. We compared the light fields generated with and without the structure to assess the imaging quality, revealing a maximum 4.78-fold improvement in the signal-to-noise ratio. This work provides a potential method for high-resolution and high-contrast light sheet fluorescence microscopic detection.

Single-shot quantitative phase-fluorescence imaging using cross-grating wavefront microscopy

The article introduces an optical microscopy technique capable of simultaneously acquiring quantitative fluorescence and phase (or equivalently wavefront) images with a single camera sensor, avoiding any delay between both images, or registration of images acquired separately. The method is based on the use of a 2-dimensional diffraction grating (aka cross-grating) positioned at a millimeter distance from a 2-color camera. Fluorescence and wavefront images are extracted from the two color channels of the camera, and retrieved by image demodulation. The applicability of the method is illustrated on various samples, namely fluorescent micro-beads, bacteria and mammalian cells.

Spherical wave illumination scanning digital holographic profilometry

In this work, we proposed what we believe to be a novel scanning solution for the assessment of high-NA samples, referred to as spherical-wave illumination scanning digital holographic profilometry (SWS-DHP). This approach introduces a 2F optimization methodology, based on the measurement of the focal length of the object to determine the spherical component of the scanning. Furthermore, re-optimization of 2F, whether it needs to be operated depends on the measured object's NA to inspect more information. Meanwhile, utilizing phase space analysis shows SWS superiority in information transfer for high-NA samples compared to plane-wave illumination scanning. In addition, this method introduces a shape reconstruction algorithm with volumetric aberration compensation based on the propagation of the aberrated object and illumination waves to obtain high-quality measurements. Finally, the imaging merits of SWS-DHP were proved through simulations and were experimentally verified for the object of NA up to 0.87.

Multi-harmonic structured illumination-based optical diffraction tomography

Imaging speed and spatial resolution are key factors in optical diffraction tomography (ODT), while they are mutually exclusive in 3D refractive index imaging. This paper presents a multi-harmonic structured illumination-based optical diffraction tomography (MHSI-ODT) to acquire 3D refractive index (RI) maps of transparent samples. MHSI-ODT utilizes a digital micromirror device (DMD) to generate structured illumination containing multiple harmonics. For each structured illumination orientation, four spherical spectral crowns are solved from five phase-shifted holograms, meaning that the acquisition of each spectral crown costs 1.25 raw images. Compared to conventional SI-ODT, which retrieves two spectral crowns from three phase-shifted raw images, MHSI-ODT enhances the imaging speed by 16.7% in 3D RI imaging. Meanwhile, MHSI-ODT exploits both the 1st-order and the 2nd-order harmonics; therefore, it has a better intensity utilization of structured illumination. We demonstrated the performance of MHSI-ODT by rendering the 3D RI distributions of 5 µm polystyrene (PS) microspheres and biological samples.