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Sebastianelli M, Lukhele SM, Secomandi S, de Souza SG, Haase B, Moysi M, Nikiforou C, Hutfluss A, Mountcastle J, Balacco J, Pelan S, Chow W, Fedrigo O, Downs CT, Monadjem A, Dingemanse NJ, Jarvis ED, Brelsford A, vonHoldt BM, Kirschel ANG. A genomic basis of vocal rhythm in birds. Nat Commun 2024; 15:3095. [PMID: 38653976 DOI: 10.1038/s41467-024-47305-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2023] [Accepted: 03/22/2024] [Indexed: 04/25/2024] Open
Abstract
Vocal rhythm plays a fundamental role in sexual selection and species recognition in birds, but little is known of its genetic basis due to the confounding effect of vocal learning in model systems. Uncovering its genetic basis could facilitate identifying genes potentially important in speciation. Here we investigate the genomic underpinnings of rhythm in vocal non-learning Pogoniulus tinkerbirds using 135 individual whole genomes distributed across a southern African hybrid zone. We find rhythm speed is associated with two genes that are also known to affect human speech, Neurexin-1 and Coenzyme Q8A. Models leveraging ancestry reveal these candidate loci also impact rhythmic stability, a trait linked with motor performance which is an indicator of quality. Character displacement in rhythmic stability suggests possible reinforcement against hybridization, supported by evidence of asymmetric assortative mating in the species producing faster, more stable rhythms. Because rhythm is omnipresent in animal communication, candidate genes identified here may shape vocal rhythm across birds and other vertebrates.
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Affiliation(s)
- Matteo Sebastianelli
- Department of Biological Sciences, University of Cyprus, PO Box 20537, Nicosia, 1678, Cyprus.
- Department of Medical Biochemistry and Microbiology, Uppsala University, Box 582, 751 23, Uppsala, Sweden.
| | - Sifiso M Lukhele
- Department of Biological Sciences, University of Cyprus, PO Box 20537, Nicosia, 1678, Cyprus
| | - Simona Secomandi
- Department of Biological Sciences, University of Cyprus, PO Box 20537, Nicosia, 1678, Cyprus
| | - Stacey G de Souza
- Department of Biological Sciences, University of Cyprus, PO Box 20537, Nicosia, 1678, Cyprus
| | - Bettina Haase
- Vertebrate Genome Lab, The Rockefeller University, New York, NY, USA
| | - Michaella Moysi
- Department of Biological Sciences, University of Cyprus, PO Box 20537, Nicosia, 1678, Cyprus
| | - Christos Nikiforou
- Department of Biological Sciences, University of Cyprus, PO Box 20537, Nicosia, 1678, Cyprus
| | - Alexander Hutfluss
- Behavioural Ecology, Faculty of Biology, LMU Munich (LMU), 82152, Planegg-Martinsried, Germany
| | | | - Jennifer Balacco
- Vertebrate Genome Lab, The Rockefeller University, New York, NY, USA
| | | | | | - Olivier Fedrigo
- Vertebrate Genome Lab, The Rockefeller University, New York, NY, USA
| | - Colleen T Downs
- Centre for Functional Biodiversity, School of Life Sciences, University of KwaZulu-Natal, Pietermaritzburg, 3209, South Africa
| | - Ara Monadjem
- Department of Biological Sciences, University of Eswatini, Kwaluseni, Eswatini
- Mammal Research Institute, Department of Zoology & Entomology, University of Pretoria, Private Bag 20, Hatfield, 0028, Pretoria, South Africa
| | - Niels J Dingemanse
- Behavioural Ecology, Faculty of Biology, LMU Munich (LMU), 82152, Planegg-Martinsried, Germany
| | - Erich D Jarvis
- Vertebrate Genome Lab, The Rockefeller University, New York, NY, USA
- Laboratory of Neurogenetics of Language, The Rockefeller University, New York, NY, USA
- Howard Hughes Medical Institute, Chevy Chase, MD, USA
| | - Alan Brelsford
- Department of Evolution, Ecology and Organismal Biology, University of California Riverside, Riverside, CA, 92521, USA
| | - Bridgett M vonHoldt
- Department of Ecology & Evolutionary Biology, Princeton University, Princeton, NJ, 08544, USA
| | - Alexander N G Kirschel
- Department of Biological Sciences, University of Cyprus, PO Box 20537, Nicosia, 1678, Cyprus.
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2
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Wang AS, Wan X, Storch DS, Li VY, Cornez G, Balthazart J, Cisneros-Franco JM, de Villers-Sidani E, Sakata JT. Cross-species conservation in the regulation of parvalbumin by perineuronal nets. Front Neural Circuits 2023; 17:1297643. [PMID: 38179221 PMCID: PMC10766385 DOI: 10.3389/fncir.2023.1297643] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2023] [Accepted: 11/29/2023] [Indexed: 01/06/2024] Open
Abstract
Parvalbumin (PV) neurons play an integral role in regulating neural dynamics and plasticity. Therefore, understanding the factors that regulate PV expression is important for revealing modulators of brain function. While the contribution of PV neurons to neural processes has been studied in mammals, relatively little is known about PV function in non-mammalian species, and discerning similarities in the regulation of PV across species can provide insight into evolutionary conservation in the role of PV neurons. Here we investigated factors that affect the abundance of PV in PV neurons in sensory and motor circuits of songbirds and rodents. In particular, we examined the degree to which perineuronal nets (PNNs), extracellular matrices that preferentially surround PV neurons, modulate PV abundance as well as how the relationship between PV and PNN expression differs across brain areas and species and changes over development. We generally found that cortical PV neurons that are surrounded by PNNs (PV+PNN neurons) are more enriched with PV than PV neurons without PNNs (PV-PNN neurons) across both rodents and songbirds. Interestingly, the relationship between PV and PNN expression in the vocal portion of the basal ganglia of songbirds (Area X) differed from that in other areas, with PV+PNN neurons having lower PV expression compared to PV-PNN neurons. These relationships remained consistent across development in vocal motor circuits of the songbird brain. Finally, we discovered a causal contribution of PNNs to PV expression in songbirds because degradation of PNNs led to a diminution of PV expression in PV neurons. These findings reveal a conserved relationship between PV and PNN expression in sensory and motor cortices and across songbirds and rodents and suggest that PV neurons could modulate plasticity and neural dynamics in similar ways across songbirds and rodents.
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Affiliation(s)
- Angela S. Wang
- Department of Biology, McGill University, Montreal, QC, Canada
| | - Xinghaoyun Wan
- Department of Biology, McGill University, Montreal, QC, Canada
- Integrated Program in Neuroscience, McGill University, Montreal, QC, Canada
| | | | - Vivian Y. Li
- Department of Biology, McGill University, Montreal, QC, Canada
| | - Gilles Cornez
- Laboratory of Behavioral Neuroendocrinology, GIGA Neurosciences, University of Liege, Liege, Belgium
| | - Jacques Balthazart
- Laboratory of Behavioral Neuroendocrinology, GIGA Neurosciences, University of Liege, Liege, Belgium
| | | | - Etienne de Villers-Sidani
- Integrated Program in Neuroscience, McGill University, Montreal, QC, Canada
- Centre for Research in Brain, Language and Music, McGill University, Montreal, QC, Canada
| | - Jon T. Sakata
- Department of Biology, McGill University, Montreal, QC, Canada
- Integrated Program in Neuroscience, McGill University, Montreal, QC, Canada
- Centre for Research in Brain, Language and Music, McGill University, Montreal, QC, Canada
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3
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Wang AS, Wan X, Storch DS, Cornez G, Balthazart J, Cisneros-Franco JM, de Villers-Sidani E, Sakata JT. Cross-species conservation in the regulation of parvalbumin by perineuronal nets. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.09.13.557580. [PMID: 37745532 PMCID: PMC10515890 DOI: 10.1101/2023.09.13.557580] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/26/2023]
Abstract
Parvalbumin (PV) neurons play an integral role in regulating neural dynamics and plasticity. Therefore, understanding the factors that regulate PV expression is important for revealing modulators of brain function. While the contribution of PV neurons to neural processes has been studied in mammals, relatively little is known about PV function in non-mammalian species, and discerning similarities in the regulation of PV across species can provide insight into evolutionary conservation in the role of PV neurons. Here we investigated factors that affect the abundance of PV in PV neurons in sensory and motor circuits of songbirds and rodents. In particular, we examined the degree to which perineuronal nets (PNNs), extracellular matrices that preferentially surround PV neurons, modulate PV abundance as well as how the relationship between PV and PNN expression differs across brain areas and species and changes over development. We generally found that cortical PV neurons that are surrounded by PNNs (PV+PNN neurons) are more enriched with PV than PV neurons without PNNs (PV-PNN neurons) across both rodents and songbirds. Interestingly, the relationship between PV and PNN expression in the vocal portion of the basal ganglia of songbirds (Area X) differed from that in other areas, with PV+PNN neurons having lower PV expression compared to PV-PNN neurons. These relationships remained consistent across development in vocal motor circuits of the songbird brain. Finally, we discovered a causal contribution of PNNs to PV expression in songbirds because degradation of PNNs led to a diminution of PV expression in PV neurons. These findings in reveal a conserved relationship between PV and PNN expression in sensory and motor cortices and across songbirds and rodents and suggest that PV neurons could modulate plasticity and neural dynamics in similar ways across songbirds and rodents.
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Affiliation(s)
- Angela S. Wang
- Department of Biology, McGill University, Montreal, Canada
| | - Xinghaoyun Wan
- Department of Biology, McGill University, Montreal, Canada
- Integrated Program in Neuroscience, McGill University, Montreal, Canada
| | | | - Gilles Cornez
- Laboratory of Behavioral Neuroendocrinology, GIGA Neurosciences, University of Liege, Liege, Belgium
| | - Jacques Balthazart
- Laboratory of Behavioral Neuroendocrinology, GIGA Neurosciences, University of Liege, Liege, Belgium
| | | | - Etienne de Villers-Sidani
- Integrated Program in Neuroscience, McGill University, Montreal, Canada
- Centre for Research in Brain, Language and Music, McGill University, Montreal, Canada
| | - Jon T. Sakata
- Department of Biology, McGill University, Montreal, Canada
- Integrated Program in Neuroscience, McGill University, Montreal, Canada
- Centre for Research in Brain, Language and Music, McGill University, Montreal, Canada
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4
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Fuxjager MJ, Ryder TB, Moody NM, Alfonso C, Balakrishnan CN, Barske J, Bosholn M, Boyle WA, Braun EL, Chiver I, Dakin R, Day LB, Driver R, Fusani L, Horton BM, Kimball RT, Lipshutz S, Mello CV, Miller ET, Webster MS, Wirthlin M, Wollman R, Moore IT, Schlinger BA. Systems biology as a framework to understand the physiological and endocrine bases of behavior and its evolution-From concepts to a case study in birds. Horm Behav 2023; 151:105340. [PMID: 36933440 DOI: 10.1016/j.yhbeh.2023.105340] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/15/2022] [Revised: 02/10/2023] [Accepted: 02/21/2023] [Indexed: 03/18/2023]
Abstract
Organismal behavior, with its tremendous complexity and diversity, is generated by numerous physiological systems acting in coordination. Understanding how these systems evolve to support differences in behavior within and among species is a longstanding goal in biology that has captured the imagination of researchers who work on a multitude of taxa, including humans. Of particular importance are the physiological determinants of behavioral evolution, which are sometimes overlooked because we lack a robust conceptual framework to study mechanisms underlying adaptation and diversification of behavior. Here, we discuss a framework for such an analysis that applies a "systems view" to our understanding of behavioral control. This approach involves linking separate models that consider behavior and physiology as their own networks into a singular vertically integrated behavioral control system. In doing so, hormones commonly stand out as the links, or edges, among nodes within this system. To ground our discussion, we focus on studies of manakins (Pipridae), a family of Neotropical birds. These species have numerous physiological and endocrine specializations that support their elaborate reproductive displays. As a result, manakins provide a useful example to help imagine and visualize the way systems concepts can inform our appreciation of behavioral evolution. In particular, manakins help clarify how connectedness among physiological systems-which is maintained through endocrine signaling-potentiate and/or constrain the evolution of complex behavior to yield behavioral differences across taxa. Ultimately, we hope this review will continue to stimulate thought, discussion, and the emergence of research focused on integrated phenotypes in behavioral ecology and endocrinology.
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Affiliation(s)
- Matthew J Fuxjager
- Department of Ecology, Evolution, and Organismal Biology, Brown University, Providence, RI 02906, USA.
| | - T Brandt Ryder
- Migratory Bird Center, Smithsonian Conservation Biology Institute, National Zoological Park, Washington, DC 20013, USA
| | - Nicole M Moody
- Department of Ecology, Evolution, and Organismal Biology, Brown University, Providence, RI 02906, USA
| | - Camilo Alfonso
- Department of Biological Sciences, Virginia Tech, Blacksburg, VA 24060, USA
| | | | - Julia Barske
- Department of Ecology and Evolutionary Biology, University of California, Los Angeles, CA 90095, USA
| | - Mariane Bosholn
- Animal Behavior Lab, Ecology Department, National Institute for Amazon Research, Manaus, Amazonas, Brazil
| | - W Alice Boyle
- Division of Biology, Kansas State University, Manhattan, KS 66506, USA
| | - Edward L Braun
- Department of Biology, University of Florida, Gainesville, FL 32611, USA
| | - Ioana Chiver
- GIGA Neurosciences, University of Liège, Liege, Belgium
| | - Roslyn Dakin
- Migratory Bird Center, Smithsonian Conservation Biology Institute, National Zoological Park, Washington, DC 20013, USA
| | - Lainy B Day
- Department of Biology, University of Mississippi, University, MS 38677, USA
| | - Robert Driver
- Department of Biology, East Carolina University, Greenville, NC 27858, USA
| | - Leonida Fusani
- Department of Behavioral and Cognitive Biology, University of Vienna, and Konrad Lorenz Institute of Ethology, University of Veterinary Medicine, Vienna
| | - Brent M Horton
- Department of Biology, Millersville University, Millersville, PA 17551, USA
| | - Rebecca T Kimball
- Department of Biology, University of Florida, Gainesville, FL 32611, USA
| | - Sara Lipshutz
- Department of Biology, Loyola University Chicago, Chicago, IL 60660, USA
| | - Claudio V Mello
- Department of Behavioral Neuroscience, Oregon Health and Science University, Portland, OR 97239, USA
| | | | - Michael S Webster
- Cornell Lab of Ornithology, Ithaca, NY 14853, USA; Department of Neurobiology and Behavior, Cornell University, Ithaca, NY 14853, USA
| | - Morgan Wirthlin
- Computational Biology Department, Carnegie Melon University, Pittsburgh, PA 15213, USA
| | - Roy Wollman
- Department of Physiology and Integrative Biology, University of California, Los Angeles, CA 90095, USA
| | - Ignacio T Moore
- Department of Biological Sciences, Virginia Tech, Blacksburg, VA 24060, USA
| | - Barney A Schlinger
- Department of Ecology and Evolutionary Biology, University of California, Los Angeles, CA 90095, USA; Department of Physiology and Integrative Biology, University of California, Los Angeles, CA 90095, USA; Smithsonian Tropical Research Institute, Panama City, Panama.
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5
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Barske J, Fuxjager MJ, Ciofi C, Natali C, Schlinger BA, Billo T, Fusani L. Beyond plumage: acrobatic courtship displays show intermediate patterns in manakin hybrids. Anim Behav 2023. [DOI: 10.1016/j.anbehav.2023.01.020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/12/2023]
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6
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Affiliation(s)
- Jon T. Sakata
- Department of Biology, McGill University, Montreal, Canada
- Centre for Research in Brain, Language and Music, McGill University, Montreal, Canada
- * E-mail:
| | - Sarah C. Woolley
- Department of Biology, McGill University, Montreal, Canada
- Centre for Research in Brain, Language and Music, McGill University, Montreal, Canada
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