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Martins GL, Ferreira DS, Carneiro CM, Nogueira-Paiva NC, Bianchi AGC. Trajectory-driven computational analysis for element characterization in Trypanosoma cruzi video microscopy. PLoS One 2024; 19:e0304716. [PMID: 38829872 PMCID: PMC11146708 DOI: 10.1371/journal.pone.0304716] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2023] [Accepted: 05/14/2024] [Indexed: 06/05/2024] Open
Abstract
Optical microscopy videos enable experts to analyze the motion of several biological elements. Particularly in blood samples infected with Trypanosoma cruzi (T. cruzi), microscopy videos reveal a dynamic scenario where the parasites' motions are conspicuous. While parasites have self-motion, cells are inert and may assume some displacement under dynamic events, such as fluids and microscope focus adjustments. This paper analyzes the trajectory of T. cruzi and blood cells to discriminate between these elements by identifying the following motion patterns: collateral, fluctuating, and pan-tilt-zoom (PTZ). We consider two approaches: i) classification experiments for discrimination between parasites and cells; and ii) clustering experiments to identify the cell motion. We propose the trajectory step dispersion (TSD) descriptor based on standard deviation to characterize these elements, outperforming state-of-the-art descriptors. Our results confirm motion is valuable in discriminating T. cruzi of the cells. Since the parasites perform the collateral motion, their trajectory steps tend to randomness. The cells may assume fluctuating motion following a homogeneous and directional path or PTZ motion with trajectory steps in a restricted area. Thus, our findings may contribute to developing new computational tools focused on trajectory analysis, which can advance the study and medical diagnosis of Chagas disease.
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Affiliation(s)
- Geovani L. Martins
- Postgraduate Program in Computer Science, Federal University of Ouro Preto, Ouro Preto, MG, Brazil
- Department of Computing, Federal University of Ouro Preto, Ouro Preto, MG, Brazil
| | - Daniel S. Ferreira
- Department of Computing, Federal Institute of Education, Science, and Technology of Ceará, Maracanaú, CE, Brazil
| | - Claudia M. Carneiro
- Nucleus of Biological Sciences Research, Federal University of Ouro Preto, Ouro Preto, MG, Brazil
- Department of Clinical Analysis, Federal University of Ouro Preto, Ouro Preto, MG, Brazil
| | - Nivia C. Nogueira-Paiva
- Nucleus of Biological Sciences Research, Federal University of Ouro Preto, Ouro Preto, MG, Brazil
| | - Andrea G. C. Bianchi
- Postgraduate Program in Computer Science, Federal University of Ouro Preto, Ouro Preto, MG, Brazil
- Department of Computing, Federal University of Ouro Preto, Ouro Preto, MG, Brazil
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Saenz-Garcia JL, Borges BS, Souza-Melo N, Machado LV, Miranda JS, Pacheco-Lugo LA, Moretti NS, Wheleer R, Soares Medeiros LC, DaRocha WD. Trypanin Disruption Affects the Motility and Infectivity of the Protozoan Trypanosoma cruzi. Front Cell Infect Microbiol 2022; 11:807236. [PMID: 35071054 PMCID: PMC8777028 DOI: 10.3389/fcimb.2021.807236] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2021] [Accepted: 12/09/2021] [Indexed: 11/13/2022] Open
Abstract
The flagellum of Trypanosomatids is an organelle that contributes to multiple functions, including motility, cell division, and host–pathogen interaction. Trypanin was first described in Trypanosoma brucei and is part of the dynein regulatory complex. TbTrypanin knockdown parasites showed motility defects in procyclic forms; however, silencing in bloodstream forms was lethal. Since TbTrypanin mutants show drastic phenotypic changes in mammalian stages, we decided to evaluate if the Trypanosoma cruzi ortholog plays a similar role by using the CRISPR-Cas9 system to generate null mutants. A ribonucleoprotein complex of SaCas9 and sgRNA plus donor oligonucleotide were used to edit both alleles of TcTrypanin without any selectable marker. TcTrypanin −/− epimastigotes showed a lower growth rate, partially detached flagella, normal numbers of nuclei and kinetoplasts, and motility defects such as reduced displacement and speed and increased tumbling propensity. The epimastigote mutant also showed decreased efficiency of in-vitro metacyclogenesis. Mutant parasites were able to complete the entire life cycle in vitro; however, they showed a reduction in their infection capacity compared with WT and addback cultures. Our data show that T. cruzi life cycle stages have differing sensitivities to TcTrypanin deletion. In conclusion, additional work is needed to dissect the motility components of T. cruzi and to identify essential molecules for mammalian stages.
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Affiliation(s)
- Jose L Saenz-Garcia
- Laboratório de Genômica Funcional de Parasitos (GFP), Universidade Federal de Paraná, Curitiba, Brazil
| | - Beatriz S Borges
- Laboratório de Biologia Celular, Instituto Carlos Chagas, Fundação Oswaldo Cruz (Fiocruz), Curitiba, Brazil
| | - Normanda Souza-Melo
- Laboratório de Biologia Molecular de Patógenos (LBMP), Departamento de Microbiologia, Imunologia e Parasitologia, Escola Paulista de Medicina, Universidade Federal de São Paulo, São Paulo, Brazil.,Laboratório de Ultraestrutura Hertha Mayer, Universidade Federal do Rio de Janeiro (UFRJ), Rio de Janeiro, Brazil
| | - Luiz V Machado
- Laboratório de Genômica Funcional de Parasitos (GFP), Universidade Federal de Paraná, Curitiba, Brazil
| | - Juliana S Miranda
- Laboratório de Genômica Funcional de Parasitos (GFP), Universidade Federal de Paraná, Curitiba, Brazil
| | | | - Nilmar S Moretti
- Laboratório de Biologia Molecular de Patógenos (LBMP), Departamento de Microbiologia, Imunologia e Parasitologia, Escola Paulista de Medicina, Universidade Federal de São Paulo, São Paulo, Brazil
| | - Richard Wheleer
- Nuffield Department of Medicine, University of Oxford, Oxford, United Kingdom
| | - Lia C Soares Medeiros
- Laboratório de Biologia Celular, Instituto Carlos Chagas, Fundação Oswaldo Cruz (Fiocruz), Curitiba, Brazil
| | - Wanderson D DaRocha
- Laboratório de Genômica Funcional de Parasitos (GFP), Universidade Federal de Paraná, Curitiba, Brazil
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Motility patterns of Trypanosoma cruzi trypomastigotes correlate with the efficiency of parasite invasion in vitro. Sci Rep 2020; 10:15894. [PMID: 32985548 PMCID: PMC7522242 DOI: 10.1038/s41598-020-72604-4] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2020] [Accepted: 08/25/2020] [Indexed: 11/08/2022] Open
Abstract
Numerous works have demonstrated that trypanosomatid motility is relevant for parasite replication and sensitivity. Nonetheless, although some findings indirectly suggest that motility also plays an important role during infection, this has not been extensively investigated. This work is aimed at partially filling this void for the case of Trypanosoma cruzi. After recording swimming T. cruzi trypomastigotes (CL Brener strain) and recovering their individual trajectories, we statistically analyzed parasite motility patterns. We did this with parasites that swim alone or above monolayer cultures of different cell lines. Our results indicate that T. cruzi trypomastigotes change their motility patterns when they are in the presence of mammalian cells, in a cell-line dependent manner. We further performed infection experiments in which each of the mammalian cell cultures were incubated for 2 h together with trypomastigotes, and measured the corresponding invasion efficiency. Not only this parameter varied from cell line to cell line, but it resulted to be positively correlated with the corresponding intensity of the motility pattern changes. Together, these results suggest that T. cruzi trypomastigotes are capable of sensing the presence of mammalian cells and of changing their motility patterns accordingly, and that this might increase their invasion efficiency.
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Grassi HC, García LC, Lobo-Sulbarán ML, Velásquez A, Andrades-Grassi FA, Cabrera H, Andrades-Grassi JE, Andrades EDJ. Quantitative Laser Biospeckle Method for the Evaluation of the Activity of Trypanosoma cruzi Using VDRL Plates and Digital Analysis. PLoS Negl Trop Dis 2016; 10:e0005169. [PMID: 27918574 PMCID: PMC5137869 DOI: 10.1371/journal.pntd.0005169] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2016] [Accepted: 11/07/2016] [Indexed: 11/19/2022] Open
Abstract
In this paper we report a quantitative laser Biospeckle method using VDRL plates to monitor the activity of Trypanosoma cruzi and the calibration conditions including three image processing algorithms and three programs (ImageJ and two programs designed in this work). Benznidazole was used as a test drug. Variable volume (constant density) and variable density (constant volume) were used for the quantitative evaluation of parasite activity in calibrated wells of the VDRL plate. The desiccation process within the well was monitored as a function of volume and of the activity of the Biospeckle pattern of the parasites as well as the quantitative effect of the surface parasite quantity (proportion of the object's plane). A statistical analysis was performed with ANOVA, Tukey post hoc and Descriptive Statistics using R and R Commander. Conditions of volume (100μl) and parasite density (2-4x104 parasites/well, in exponential growth phase), assay time (up to 204min), frame number (11 frames), algorithm and program (RCommander/SAGA) for image processing were selected to test the effect of variable concentrations of benznidazole (0.0195 to 20μg/mL / 0.075 to 76.8μM) at various times (1, 61, 128 and 204min) on the activity of the Biospeckle pattern. The flat wells of the VDRL plate were found to be suitable for the quantitative calibration of the activity of Trypanosoma cruzi using the appropriate algorithm and program. Under these conditions, benznidazole produces at 1min an instantaneous effect on the activity of the Biospeckle pattern of T. cruzi, which remains with a similar profile up to 1 hour. A second effect which is dependent on concentrations above 1.25μg/mL and is statistically different from the effect at lower concentrations causes a decrease in the activity of the Biospeckle pattern. This effect is better detected after 1 hour of drug action. This behavior may be explained by an instantaneous effect on a membrane protein of Trypanosoma cruzi that could mediate the translocation of benznidazole. At longer times the effect may possibly be explained by the required transformation of the pro-drug into the active drug.
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Affiliation(s)
| | - Lisbette C. García
- Facultad de Farmacia y Bionálisis, Universidad de Los Andes, Mérida, Venezuela
| | - María Lorena Lobo-Sulbarán
- Cátedra de Farmacología y Terapéutica, Departamento de Biopatología, Facultad de Odontología, Universidad de Los Andes, Mérida, Venezuela
| | - Ana Velásquez
- Centro Multidisciplinario de Ciencias, Instituto Venezolano de Investigaciones Científicas, Mérida, Venezuela
| | | | - Humberto Cabrera
- Centro Multidisciplinario de Ciencias, Instituto Venezolano de Investigaciones Científicas, Mérida, Venezuela
- SPIE-ICTP Anchor Research in Optics Program Laboratory, International Centre for Theoretical Physics, Trieste, Italy
- * E-mail:
| | - Jesús E. Andrades-Grassi
- Facultad de Ciencias Forestales y Ambientales, Departamento de Ordenación de Cuencas, Universidad de Los Andes Mérida, Venezuela
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