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Siddique MF, Haque MA, Barman AC, Tanu MB, Shahjahan M, Uddin MJ. Freshwater pearl culture in Bangladesh: Current status and prospects. Heliyon 2024; 10:e29023. [PMID: 38617946 PMCID: PMC11015134 DOI: 10.1016/j.heliyon.2024.e29023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2023] [Revised: 03/22/2024] [Accepted: 03/28/2024] [Indexed: 04/16/2024] Open
Abstract
Freshwater pearl farming is an emerging sector of aquaculture in Bangladesh which plays a growing role at major jewelry markets. With some improved techniques, high quality image or designer pearls are now produced from freshwater mussels Lamellidens marginalis. Yet it is difficult to reach in conclusion as the quantities produced, culture techniques used, and the upgrading of the existing culture technique are not well documented. Furthermore, many obstacles such as proper dissemination of culture technologies among the interested peoples, optimization of the culture environment and culture methods, standardization of breeding protocol and so on need to be addressed by the scientific community. This review article reports for the first time about the status of freshwater pearl culture in Bangladesh highlighting the fundamentals of pearl production, culture techniques used in farms, challenges, and prospects for upgradation of current culture principles in Bangladesh.
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Affiliation(s)
- Mohammad Ferdous Siddique
- Department of Fisheries Management, Bangladesh Agricultural University, Mymensingh-2202, Bangladesh
- Bangladesh Fisheries Research Institute, Mymensingh-2201, Bangladesh
| | | | - Arun Chandra Barman
- Faculty of Fisheries, Habiganj Agricultural University, Habiganj, Bangladesh
| | | | - Md Shahjahan
- Department of Fisheries Management, Bangladesh Agricultural University, Mymensingh-2202, Bangladesh
| | - M. Jasim Uddin
- Department of Fisheries Management, Bangladesh Agricultural University, Mymensingh-2202, Bangladesh
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Stenger P, Ky C, Vidal‐Dupiol J, Planes S, Reisser C. Identifying genes associated with genetic control of color polymorphism in the pearl oyster Pinctada margaritifera var. cumingii (Linnaeus 1758) using a comparative whole genome pool-sequencing approach. Evol Appl 2023; 16:408-427. [PMID: 36793698 PMCID: PMC9923487 DOI: 10.1111/eva.13464] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2021] [Accepted: 07/22/2022] [Indexed: 11/29/2022] Open
Abstract
For hundreds of years, the color diversity of Mollusca shells has been a topic of interest for humanity. However, the genetic control underlying color expression is still poorly understood in mollusks. The pearl oyster Pinctada margaritifera is increasingly becoming a biological model to study this process due to its ability to produce a large range of colors. Previous breeding experiments demonstrated that color phenotypes were partly under genetic control, and while a few genes were found in comparative transcriptomics and epigenetic experiments, genetic variants associated with the phenotypes have not yet been investigated. Here, we used a pooled-sequencing approach on 172 individuals to investigate color-associated variants on three color phenotypes of economic interest for pearl farming, in three wild and one hatchery populations. While our results uncovered SNPs targeting pigment-related genes already identified in previous studies, such as PBGD, tyrosinases, GST, or FECH, we also identified new color-related genes occurring in the same pathways, like CYP4F8, CYP3A4, and CYP2R1. Moreover, we identified new genes involved in novel pathways unknown to be involved in shell coloration for P. margaritifera, like the carotenoid pathway, BCO1. These findings are essential to possibly implement future breeding programs focused on individual selection for specific color production in pearl oysters and improve the footprint of perliculture on the Polynesian lagoon by producing less but with a better quality.
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Affiliation(s)
| | - Chin‐Long Ky
- Ifremer, IRD, Institut Louis‐MalardéUniv Polynésie française, EIOVairaoFrance
- IHPE, Univ. Montpellier, CNRS, Ifremer, Univ. Perpignan Via DomitiaMontpellierFrance
| | - Jeremie Vidal‐Dupiol
- IHPE, Univ. Montpellier, CNRS, Ifremer, Univ. Perpignan Via DomitiaMontpellierFrance
| | - Serge Planes
- PSL Research University, EPHE‐UPVD‐CNRS, USR 3278 CRIOBE, Labex Corail, Université de PerpignanPerpignan CedexFrance
| | - Céline Reisser
- Ifremer, IRD, Institut Louis‐MalardéUniv Polynésie française, EIOVairaoFrance
- MARBEC, Univ Montpellier, CNRS, IFREMER, IRDMontpellierFrance
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Yi L, Zou B, Xie L, Zhang R. DCSr-NL: A Novel Method to Semiquantitatively Probe the Growth Rate of Nacre. ACS OMEGA 2022; 7:23624-23633. [PMID: 35847271 PMCID: PMC9281326 DOI: 10.1021/acsomega.2c02230] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Matrix proteins play critical roles in regulating the prismatic and nacreous layer formation in the shell. However, due to the dearth of in vivo experiments, their specific roles during shell formation are still unclear. In this study, a new method to detect the content of Sr in the nacreous layer (DCSr-NL), which can semiquantitatively measure the nacreous growth rate, has been proposed. In vitro experiments show that during in vitro crystallization, the Sr element can replace Ca partially, resulting in isomorphism. In vivo experiments show that the best labeling conditions are when the Sr/Ca in seawater is 0.3, at 24 °C, and at 4 days of culture. Although a surface morphological difference in the inner layer of nacre is seldom detected by scanning electron microscopy (SEM), knockdown of the classical gene nacrein or unknown gene NU9, combined with DCSr-NL, shows that both significantly decrease the nacreous layer formation rate. The knockdown of the classical gene Pif177 or unknown genes NU3 or MRPN affects the surface morphology and decreases the nacreous layer formation rate. In general, thanks to DCSr-NL, we can efficiently analyze the growth rate of the nacre with or without morphological changes by SEM, and it is of considerable significance for exploring the target gene's function in forming the nacre in vivo.
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Effect of temperature on pearl deposition rate and matrix protein gene expressions in Hyriopsis cumingii. AQUACULTURE AND FISHERIES 2021. [DOI: 10.1016/j.aaf.2021.06.006] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Van Wynsberge S, Le Gendre R, Sangare N, Aucan J, Menkes C, Liao V, Andréfouët S. Monitoring pearl farming lagoon temperature with global high resolution satellite-derived products: An evaluation using Raroia Atoll, French Polynesia. MARINE POLLUTION BULLETIN 2020; 160:111576. [PMID: 32861941 DOI: 10.1016/j.marpolbul.2020.111576] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2020] [Revised: 08/13/2020] [Accepted: 08/13/2020] [Indexed: 06/11/2023]
Abstract
Temperature is important for pearl oyster reproduction, pelagic larval duration, and growth in the context of pearl farming, but has seldom been monitored over long periods in remote atolls. To test if satellite-derived Sea Surface Temperature (SST) could provide a solution, two daily global SST products were compared with 18 high-precision loggers deployed during 10-months in the wide Raroia atoll (Tuamotu Archipelago, French Polynesia). The Multi-scale-Ultra-high-Resolution (MUR) SST was better correlated with lagoon temperature (r > 0.97) than the Global-Foundation-Sea-Surface-Temperature-Analysis (G1SST) SST (r < 0.94). Differences between observations and MUR SST ranged between -0.75 °C and + 1.12 °C and were influenced by seasons and locations, depth, and hours of measurements. Within this uncertainty range, simulations using a Dynamic Energy Budget model predicted similar life traits of oysters. Therefore, MUR SST appears suitable to monitor lagoon temperature in wide atolls, model oyster population dynamics and assist pearl oyster research and management.
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Affiliation(s)
- Simon Van Wynsberge
- Ifremer, IRD, Univ Nouvelle-Calédonie, Univ LaRéunion, CNRS, ENTROPIE, F-98800 Nouméa, New Caledonia.
| | - Romain Le Gendre
- Ifremer, IRD, Univ Nouvelle-Calédonie, Univ LaRéunion, CNRS, ENTROPIE, F-98800 Nouméa, New Caledonia
| | - Nathanaël Sangare
- Institut de Recherche pour le Développement, UMR 9220 ENTROPIE (Institut de Recherche Pour le Développement, Université de la Réunion, IFREMER, Université de la Nouvelle-Calédonie, Centre National de la Recherche Scientifique), BP A5, 98848 Nouméa cedex, New Caledonia; Ifremer, IRD, Institut Louis-Malardé, Univ Polynésie française, EIO, F-98719 Taravao Tahiti, French Polynesia
| | - Jérôme Aucan
- Institut de Recherche pour le Développement, UMR 9220 ENTROPIE (Institut de Recherche Pour le Développement, Université de la Réunion, IFREMER, Université de la Nouvelle-Calédonie, Centre National de la Recherche Scientifique), BP A5, 98848 Nouméa cedex, New Caledonia
| | - Christophe Menkes
- Institut de Recherche pour le Développement, UMR 9220 ENTROPIE (Institut de Recherche Pour le Développement, Université de la Réunion, IFREMER, Université de la Nouvelle-Calédonie, Centre National de la Recherche Scientifique), BP A5, 98848 Nouméa cedex, New Caledonia
| | - Vetea Liao
- Direction des Ressources Marines, Papeete, French Polynesia
| | - Serge Andréfouët
- Institut de Recherche pour le Développement, UMR 9220 ENTROPIE (Institut de Recherche Pour le Développement, Université de la Réunion, IFREMER, Université de la Nouvelle-Calédonie, Centre National de la Recherche Scientifique), BP A5, 98848 Nouméa cedex, New Caledonia
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Reisser C, Lo C, Schikorski D, Sham Koua M, Planes S, Ky CL. Strong genetic isolation of the black-lipped pearl oyster (Pinctada margaritifera) in the Marquesas archipelago (French Polynesia). Sci Rep 2019; 9:11420. [PMID: 31388098 PMCID: PMC6684808 DOI: 10.1038/s41598-019-47729-w] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2018] [Accepted: 07/23/2019] [Indexed: 11/09/2022] Open
Abstract
The French Polynesian islands are internationally known for their black pearls, produced by culture of the black lipped pearl oyster Pinctada margaritifera. The ongoing development of hatcheries for P. margaritifera in French Polynesia poses new challenges for the industry, particularly regarding the maintenance of genetic diversity in the hatchery stocks. This emphasizes the necessity to characterize the genetic diversity and differentiation within natural and exploited populations, to carefully select putative parental populations. The present study aimed at validating the phylogenetic status and investigating genetic attributes of populations from the only two non-exploited archipelagos of French Polynesia, the Marquesas archipelago, and the Australes archipelago, never analysed before. We found that individuals from both archipelagos belonged to P. margaritifera species. However, while the Australes population was genetically similar to non-exploited populations of the Tuamotu, the Marquesas populations were highly differentiated from the rest of the populations. This differentiation cannot not be only attributed to geographic distance and aquaculture status, but likely to hydrodynamic barriers allowing vicariant events to take place. Our results add up to other studies describing the Marquesas archipelago as a hotspot for biodiversity and differentiation, with some of the highest levels of endemism and vicariance found among marine species worldwide and provide precious information on available genetic resources for the implementation of P. margaritifera selective breeding and its genetic conservation in French Polynesia.
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Affiliation(s)
- Céline Reisser
- Ifremer, UMR EIO 241, Centre du Pacifique, BP 49, 98719 Taravao, Tahiti, French Polynesia
| | - Cédrik Lo
- Direction des Ressources Marines et Minières, BP 20, 98713 Papeete, Tahiti, French Polynesia
| | - David Schikorski
- Laboratoire Labofarm, 4 Rue Théodore Botrel 22603 Loudeac, Cedex, France
| | - Manaarii Sham Koua
- Ifremer, UMR EIO 241, Centre du Pacifique, BP 49, 98719 Taravao, Tahiti, French Polynesia
| | - Serge Planes
- PSL Research University: EPHE-UPVD-CNRS, USR 3278 CRIOBE, Labex Corail, Université de Perpignan, 52 Avenue Paul Alduy, 66860 Perpignan, Cedex, France
| | - Chin-Long Ky
- Ifremer, UMR EIO 241, Centre du Pacifique, BP 49, 98719 Taravao, Tahiti, French Polynesia.
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Le Moullac G, Schuck L, Chabrier S, Belliard C, Lyonnard P, Broustal F, Soyez C, Saulnier D, Brahmi C, Ky CL, Beliaeff B. Influence of temperature and pearl rotation on biomineralization in the pearl oyster, Pinctada margaritifera. ACTA ACUST UNITED AC 2018; 221:jeb.186858. [PMID: 30072384 DOI: 10.1242/jeb.186858] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2018] [Accepted: 07/25/2018] [Indexed: 11/20/2022]
Abstract
The objective of this study was to observe the impact of temperature on pearl formation using an integrative approach describing the rotation of the pearls, the rate of nacre deposition, the thickness of the aragonite tablets and the biomineralizing potential of the pearl sac tissue though the expression level of some key genes. Fifty pearl oysters were grafted with magnetized nuclei to allow the rotation of the pearls to be described. Four months later, 32 of these pearl oysters were exposed to four temperatures (22, 26, 30 and 34°C) for 2 weeks. Results showed that the rotation speed differed according to the movement direction: pearls with axial movement had a significantly higher rotation speed than those with random movement. Pearl growth rate was influenced by temperature, with a maximum between 26 and 30°C but almost no growth at 34°C. Lastly, among the nine genes implicated in the biomineralization process, only Pmarg-Pif177 expression was significantly modified by temperature. These results showed that the rotation speed of the pearls was not linked to pearl growth or to the expression profiles of biomineralizing genes targeted in this study. On the basis of our results, we consider that pearl rotation is a more complex process than formerly thought. Mechanisms involved could include a strong environmental forcing in immediate proximity to the pearl. Another implication of our findings is that, in the context of ocean warming, pearl growth and quality can be expected to decrease in pearl oysters exposed to temperatures above 30°C.
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Affiliation(s)
- Gilles Le Moullac
- Ifremer, UMR EIO 241, Labex Corail, Centre du Pacifique, BP 49, 98719 Taravao, Tahiti, French Polynesia
| | - Lucie Schuck
- Ifremer, UMR EIO 241, Labex Corail, Centre du Pacifique, BP 49, 98719 Taravao, Tahiti, French Polynesia
| | - Sébastien Chabrier
- Université de Polynésie Française, laboratoire GEPASUD, BP 6570, 98702 Faa'a, Tahiti, French Polynesia
| | - Corinne Belliard
- Ifremer, UMR EIO 241, Labex Corail, Centre du Pacifique, BP 49, 98719 Taravao, Tahiti, French Polynesia
| | - Pierre Lyonnard
- Ifremer, UMR EIO 241, Labex Corail, Centre du Pacifique, BP 49, 98719 Taravao, Tahiti, French Polynesia
| | - Floriane Broustal
- Ifremer, UMR EIO 241, Labex Corail, Centre du Pacifique, BP 49, 98719 Taravao, Tahiti, French Polynesia
| | - Claude Soyez
- Ifremer, UMR EIO 241, Labex Corail, Centre du Pacifique, BP 49, 98719 Taravao, Tahiti, French Polynesia
| | - Denis Saulnier
- Ifremer, UMR EIO 241, Labex Corail, Centre du Pacifique, BP 49, 98719 Taravao, Tahiti, French Polynesia
| | - Chloé Brahmi
- Université de Polynésie Française, UMR EIO 241, Labex Corail, BP 6570, 98702 Faa'a, Tahiti, French Polynesia
| | - Chin-Long Ky
- Ifremer, UMR EIO 241, Labex Corail, Centre du Pacifique, BP 49, 98719 Taravao, Tahiti, French Polynesia
| | - Benoit Beliaeff
- Ifremer, UMR EIO 241, Labex Corail, Centre du Pacifique, BP 49, 98719 Taravao, Tahiti, French Polynesia
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