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For: Hauke L, Narasimhan S, Primeßnig A, Kaverina I, Rehfeldt F. A Focal Adhesion Filament Cross-correlation Kit for fast, automated segmentation and correlation of focal adhesions and actin stress fibers in cells. PLoS One 2021;16:e0250749. [PMID: 34506490 PMCID: PMC8432882 DOI: 10.1371/journal.pone.0250749] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2021] [Accepted: 08/23/2021] [Indexed: 11/18/2022]  Open
Number Cited by Other Article(s)
1
Lofaro FD, Costa S, Simone ML, Quaglino D, Boraldi F. Fibroblasts' secretome from calcified and non-calcified dermis in Pseudoxanthoma elasticum differently contributes to elastin calcification. Commun Biol 2024;7:577. [PMID: 38755434 PMCID: PMC11099146 DOI: 10.1038/s42003-024-06283-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2023] [Accepted: 05/03/2024] [Indexed: 05/18/2024]  Open
2
Mostert D, Grolleman J, van Turnhout MC, Groenen BGW, Conte V, Sahlgren CM, Kurniawan NA, Bouten CVC. SFAlab: image-based quantification of mechano-active ventral actin stress fibers in adherent cells. Front Cell Dev Biol 2023;11:1267822. [PMID: 37779894 PMCID: PMC10540851 DOI: 10.3389/fcell.2023.1267822] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2023] [Accepted: 09/06/2023] [Indexed: 10/03/2023]  Open
3
Shilpashree PS, Ravi T, Thanuja MY, Anupama C, Ranganath SH, Suresh KV, Srinivas SP. Grading the Severity of Damage to the Perijunctional Actomyosin Ring and Zonula Occludens-1 of the Corneal Endothelium by Ensemble Learning Methods. J Ocul Pharmacol Ther 2023. [PMID: 36930844 DOI: 10.1089/jop.2022.0154] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/19/2023]  Open
4
Hauke L, Primeßnig A, Eltzner B, Radwitz J, Huckemann SF, Rehfeldt F. FilamentSensor 2.0: An open-source modular toolbox for 2D/3D cytoskeletal filament tracking. PLoS One 2023;18:e0279336. [PMID: 36745610 PMCID: PMC9901806 DOI: 10.1371/journal.pone.0279336] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2022] [Accepted: 12/05/2022] [Indexed: 02/07/2023]  Open
5
Basu A, Paul MK, Weiss S. The actin cytoskeleton: Morphological changes in pre- and fully developed lung cancer. BIOPHYSICS REVIEWS 2022;3:041304. [PMID: 38505516 PMCID: PMC10903407 DOI: 10.1063/5.0096188] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/15/2022] [Accepted: 12/09/2022] [Indexed: 03/21/2024]
6
Narasimhan S, Holmes WR, Kaverina I. Merging of ventral fibers at adhesions drives the remodeling of cellular contractile systems in fibroblasts. Cytoskeleton (Hoboken) 2022;79:81-93. [PMID: 35996927 PMCID: PMC9770016 DOI: 10.1002/cm.21722] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2022] [Revised: 08/10/2022] [Accepted: 08/17/2022] [Indexed: 01/30/2023]
7
Contreras M, Bachman W, Long DS. Discrete protein metric (DPM): A new image similarity metric to calculate accuracy of deep learning-generated cell focal adhesion predictions. Micron 2022;160:103302. [PMID: 35689876 PMCID: PMC10228147 DOI: 10.1016/j.micron.2022.103302] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2022] [Revised: 05/13/2022] [Accepted: 05/13/2022] [Indexed: 01/21/2023]
8
Basu A, Paul MK, Alioscha-Perez M, Grosberg A, Sahli H, Dubinett SM, Weiss S. Statistical parametrization of cell cytoskeleton reveals lung cancer cytoskeletal phenotype with partial EMT signature. Commun Biol 2022;5:407. [PMID: 35501466 PMCID: PMC9061773 DOI: 10.1038/s42003-022-03358-0] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2021] [Accepted: 04/12/2022] [Indexed: 12/14/2022]  Open
9
Mukherjee A, Zhang H, Ladner K, Brown M, Urbanski J, Grieco JP, Kapania RK, Lou E, Behkam B, Schmelz EM, Nain AS. Quantitative Biophysical Metrics for Rapid Evaluation of Ovarian Cancer Metastatic Potential. Mol Biol Cell 2022;33:ar55. [PMID: 34985924 PMCID: PMC9265161 DOI: 10.1091/mbc.e21-08-0419] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]  Open
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