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Sajib SZK, Chauhan M, Sahu S, Boakye E, Sadleir RJ. Validation of conductivity tensor imaging against diffusion tensor magnetic resonance electrical impedance tomography. Sci Rep 2024; 14:17995. [PMID: 39097661 PMCID: PMC11297941 DOI: 10.1038/s41598-024-68551-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2023] [Accepted: 07/24/2024] [Indexed: 08/05/2024] Open
Abstract
Diffusion tensor magnetic resonance electrical impedance tomography (DT-MREIT) and electrodeless conductivity tensor imaging (CTI) are two emerging modalities that can quantify low-frequency tissue anisotropic conductivity properties by assuming similar properties underlie ionic mobility and water diffusion. While both methods have potential applications to estimating neuro-modulation fields or formulating forward models used for electrical source imaging, a direct comparison of the two modalities has not yet been performed in-vitro or in-vivo. Therefore, the aim of this study was to test the equivalence of these two modalities. We scanned a tissue phantom and the head of human subject using DT-MREIT and CTI protocols and reconstructed conductivity tensor and effective low frequency conductivities. We found both gray and white matter conductivities recovered by each technique were equivalent within 0.05 S/m. Both DT-MREIT and CTI require multiple processing steps, and we further assess the effects of each factor on reconstructions and evaluate the extent to which different measurement mechanisms potentially cause discrepancies between the two methods. Finally, we discuss the implications for spectral models of measuring conductivity using these techniques. The study further establishes the credibility of CTI as an electrodeless non-invasive method of measuring low frequency conductivity properties.
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Affiliation(s)
- S Z K Sajib
- School of Biological and Health Systems Engineering, Arizona State University, Tempe, AZ, 85287, USA
| | - M Chauhan
- School of Biological and Health Systems Engineering, Arizona State University, Tempe, AZ, 85287, USA
- Hoglund Biomedical Imaging Center, University of Kansas Medical Center, Kansas City, KS, 66160, USA
| | - S Sahu
- School of Biological and Health Systems Engineering, Arizona State University, Tempe, AZ, 85287, USA
| | - E Boakye
- School of Biological and Health Systems Engineering, Arizona State University, Tempe, AZ, 85287, USA
| | - R J Sadleir
- School of Biological and Health Systems Engineering, Arizona State University, Tempe, AZ, 85287, USA.
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Göksu C, Gregersen F, Scheffler K, Eroğlu HH, Heule R, Siebner HR, Hanson LG, Thielscher A. Volumetric measurements of weak current-induced magnetic fields in the human brain at high resolution. Magn Reson Med 2023; 90:1874-1888. [PMID: 37392412 DOI: 10.1002/mrm.29780] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2023] [Revised: 05/10/2023] [Accepted: 06/12/2023] [Indexed: 07/03/2023]
Abstract
PURPOSE Clinical use of transcranial electrical stimulation (TES) requires accurate knowledge of the injected current distribution in the brain. MR current density imaging (MRCDI) uses measurements of the TES-induced magnetic fields to provide this information. However, sufficient sensitivity and image quality in humans in vivo has only been documented for single-slice imaging. METHODS A recently developed, optimally spoiled, acquisition-weighted, gradient echo-based 2D-MRCDI method has now been advanced for volume coverage with densely or sparsely distributed slices: The 3D rectilinear sampling (3D-DENSE) and simultaneous multislice acquisition (SMS-SPARSE) were optimized and verified by cable-loop experiments and tested with 1-mA TES experiments for two common electrode montages. RESULTS Comparisons between the volumetric methods against the 2D-MRCDI showed that relatively long acquisition times of 3D-DENSE using a single slab with six slices hindered the expected sensitivity improvement in the current-induced field measurements but improved sensitivity by 61% in the Laplacian of the field, on which some MRCDI reconstruction methods rely. Also, SMS-SPARSE acquisition of three slices, with a factor 2 CAIPIRINHA (controlled aliasing in parallel imaging results in higher acceleration) acceleration, performed best against the 2D-MRCDI with sensitivity improvements for the∆ B z , c $$ \Delta {B}_{z,c} $$ and Laplacian noise floors of 56% and 78% (baseline without current flow) as well as 43% and 55% (current injection into head). SMS-SPARSE reached a sensitivity of 67 pT for three distant slices at 2 × 2 × 3 mm3 resolution in 10 min of total scan time, and consistently improved image quality. CONCLUSION Volumetric MRCDI measurements with high sensitivity and image quality are well suited to characterize the TES field distribution in the human brain.
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Affiliation(s)
- Cihan Göksu
- Danish Research Centre for Magnetic Resonance, Center for Functional and Diagnostic Imaging and Research, Copenhagen University Hospital Amager and Hvidovre, Copenhagen, Denmark
- High-Field Magnetic Resonance Center, Max-Planck Institute for Biological Cybernetics, Tübingen, Germany
| | - Fróði Gregersen
- Danish Research Centre for Magnetic Resonance, Center for Functional and Diagnostic Imaging and Research, Copenhagen University Hospital Amager and Hvidovre, Copenhagen, Denmark
- Section for Magnetic Resonance, DTU Health Tech, Technical University of Denmark, Kgs Lyngby, Denmark
- Sino-Danish Center for Education and Research, Aarhus, Denmark
| | - Klaus Scheffler
- High-Field Magnetic Resonance Center, Max-Planck Institute for Biological Cybernetics, Tübingen, Germany
- Department of Biomedical Magnetic Resonance, University of Tübingen, Tübingen, Germany
| | - Hasan H Eroğlu
- Danish Research Centre for Magnetic Resonance, Center for Functional and Diagnostic Imaging and Research, Copenhagen University Hospital Amager and Hvidovre, Copenhagen, Denmark
- Section for Magnetic Resonance, DTU Health Tech, Technical University of Denmark, Kgs Lyngby, Denmark
| | - Rahel Heule
- High-Field Magnetic Resonance Center, Max-Planck Institute for Biological Cybernetics, Tübingen, Germany
- Department of Biomedical Magnetic Resonance, University of Tübingen, Tübingen, Germany
| | - Hartwig R Siebner
- Danish Research Centre for Magnetic Resonance, Center for Functional and Diagnostic Imaging and Research, Copenhagen University Hospital Amager and Hvidovre, Copenhagen, Denmark
- Department of Neurology, Copenhagen University Hospital Bispebjerg and Frederiksberg, Copenhagen, Denmark
- Faculty of Medical and Health Sciences, Institute for Clinical Medicine, University of Copenhagen, Copenhagen, Denmark
| | - Lars G Hanson
- Danish Research Centre for Magnetic Resonance, Center for Functional and Diagnostic Imaging and Research, Copenhagen University Hospital Amager and Hvidovre, Copenhagen, Denmark
- Section for Magnetic Resonance, DTU Health Tech, Technical University of Denmark, Kgs Lyngby, Denmark
| | - Axel Thielscher
- Danish Research Centre for Magnetic Resonance, Center for Functional and Diagnostic Imaging and Research, Copenhagen University Hospital Amager and Hvidovre, Copenhagen, Denmark
- Section for Magnetic Resonance, DTU Health Tech, Technical University of Denmark, Kgs Lyngby, Denmark
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Hernandez D, Kim KN. Use of machine learning to improve the estimation of conductivity and permittivity based on longitudinal relaxation time T1 in magnetic resonance at 7 T. Sci Rep 2023; 13:7837. [PMID: 37188769 PMCID: PMC10185549 DOI: 10.1038/s41598-023-35104-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Accepted: 05/12/2023] [Indexed: 05/17/2023] Open
Abstract
Electrical property tomography (EPT) is a noninvasive method that uses magnetic resonance imaging (MRI) to estimate the conductivity and permittivity of tissues, and hence, can be used as a biomarker. One branch of EPT is based on the correlation of water and relaxation time T1 with the conductivity and permittivity of tissues. This correlation was applied to a curve-fitting function to estimate electrical properties, it was found to have a high correlation between permittivity and T1 however the computation of conductivity based on T1 requires to estimate the water content. In this study, we developed multiple phantoms with several ingredients that modify the conductivity and permittivity and explored the use of machine learning algorithms to have a direct estimation of conductivity and permittivity based on MR images and the relaxation time T1. To train the algorithms, each phantom was measured using a dielectric measurement device to acquire the true conductivity and permittivity. MR images were taken for each phantom, and the T1 values were measured. Then, the acquired data were tested using curve fitting, regression learning, and neural fit models to estimate the conductivity and permittivity values based on the T1 values. In particular, the regression learning algorithm based on Gaussian process regression showed high accuracy with a coefficient of determination R2 of 0.96 and 0.99 for permittivity and conductivity, respectively. The estimation of permittivity using regression learning demonstrated a lower mean error of 0.66% compared to the curve fitting method, which resulted in a mean error of 3.6%. The estimation of conductivity also showed that the regression learning approach had a lower mean error of 0.49%, whereas the curve fitting method resulted in a mean error of 6%. The findings suggest that utilizing regression learning models, specifically Gaussian process regression, can result in more accurate estimations for both permittivity and conductivity compared to other methods.
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Affiliation(s)
- Daniel Hernandez
- Neuroscience Research Institute, Gachon University, Incheon, 21988, Korea
| | - Kyoung-Nam Kim
- Department of Biomedical Engineering, Gachon University, Seongnam, 13120, Korea.
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Sasaki K, Porter E, Rashed EA, Farrugia L, Schmid G. Measurement and image-based estimation of dielectric properties of biological tissues —past, present, and future—. Phys Med Biol 2022; 67. [DOI: 10.1088/1361-6560/ac7b64] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2022] [Accepted: 06/22/2022] [Indexed: 12/23/2022]
Abstract
Abstract
The dielectric properties of biological tissues are fundamental pararmeters that are essential for electromagnetic modeling of the human body. The primary database of dielectric properties compiled in 1996 on the basis of dielectric measurements at frequencies from 10 Hz to 20 GHz has attracted considerable attention in the research field of human protection from non-ionizing radiation. This review summarizes findings on the dielectric properties of biological tissues at frequencies up to 1 THz since the database was developed. Although the 1996 database covered general (normal) tissues, this review also covers malignant tissues that are of interest in the research field of medical applications. An intercomparison of dielectric properties based on reported data is presented for several tissue types. Dielectric properties derived from image-based estimation techniques developed as a result of recent advances in dielectric measurement are also included. Finally, research essential for future advances in human body modeling is discussed.
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Phillips J, Glodowski M, Gokhale Y, Dwyer M, Ashtiani A, Hai A. Enhanced magnetic transduction of neuronal activity by nanofabricated inductors quantified via finite element analysis. J Neural Eng 2022; 19:10.1088/1741-2552/ac7907. [PMID: 35705065 PMCID: PMC9400688 DOI: 10.1088/1741-2552/ac7907] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2021] [Accepted: 06/15/2022] [Indexed: 11/11/2022]
Abstract
Objective.Methods for the detection of neural signals involve a compromise between invasiveness, spatiotemporal resolution, and the number of neurons or brain regions recorded. Electrode-based probes provide excellent response but usually require transcranial wiring and capture activity from limited neuronal populations. Noninvasive methods such as electroencephalography and magnetoencephalography offer fast readouts of field potentials or biomagnetic signals, respectively, but have spatial constraints that prohibit recording from single neurons. A cell-sized device that enhances neurogenic magnetic fields can be used as anin situsensor for magnetic-based modalities and increase the ability to detect diverse signals across multiple brain regions.Approach.We designed and modeled a device capable of forming a tight electromagnetic junction with single neurons, thereby transducing changes in cellular potential to magnetic field perturbations by driving current through a nanofabricated inductor element.Main results.We present detailed quantification of the device performance using realistic finite element simulations with signals and geometries acquired from patch-clamped neuronsin vitroand demonstrate the capability of the device to produce magnetic signals readable via existing modalities. We compare the magnetic output of the device to intrinsic neuronal magnetic fields (NMFs) and show that the transduced magnetic field intensity from a single neuron is more than three-fold higher at its peak (1.62 nT vs 0.51 nT). Importantly, we report on a large spatial enhancement of the transduced magnetic field output within a typical voxel (40 × 40 × 10µm) over 250 times higher than the intrinsic NMF strength (0.64 nT vs 2.5 pT). We use this framework to perform optimizations of device performance based on nanofabrication constraints and material choices.Significance.Our quantifications institute a foundation for synthesizing and applying electromagnetic sensors for detecting brain activity and can serve as a general method for quantifying recording devices at the single cell level.
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Affiliation(s)
- Jack Phillips
- Department of Biomedical Engineering, University of Wisconsin–Madison
- Wisconsin Institute for Translational Neuroengineering (WITNe), University of Wisconsin-Madison
| | | | - Yash Gokhale
- Department of Biomedical Engineering, University of Wisconsin–Madison
| | - Matt Dwyer
- Department of Biomedical Engineering, University of Wisconsin–Madison
- Department of Electrical and Computer Engineering, University of Wisconsin–Madison
| | - Alireza Ashtiani
- Department of Biomedical Engineering, University of Wisconsin–Madison
| | - Aviad Hai
- Department of Biomedical Engineering, University of Wisconsin–Madison
- Department of Electrical and Computer Engineering, University of Wisconsin–Madison
- Wisconsin Institute for Translational Neuroengineering (WITNe), University of Wisconsin-Madison
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Abboud T, Mielke D, Rohde V. Mini Review: Impedance Measurement in Neuroscience and Its Prospective Application in the Field of Surgical Neurooncology. Front Neurol 2022; 12:825012. [PMID: 35111132 PMCID: PMC8801870 DOI: 10.3389/fneur.2021.825012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2021] [Accepted: 12/27/2021] [Indexed: 11/13/2022] Open
Abstract
Impedance measurement of human tissue can be performed either in vivo or ex vivo. The majority of the in-vivo approaches are non-invasive, and few are invasive. To date, there is no gold standard for impedance measurement of intracranial tissue. In addition, most of the techniques addressing this topic are still experimental and have not found their way into clinical practice. This review covers available impedance measurement approaches in the neuroscience in general and specifically addresses recent advances made in the application of impedance measurement in the field of surgical neurooncology. It will provide an understandable picture on impedance measurement and give an overview of limitations that currently hinders clinical application and require future technical and conceptual solutions.
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Sajib SZK, Sadleir R. Magnetic Resonance Electrical Impedance Tomography. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2022; 1380:157-183. [PMID: 36306098 DOI: 10.1007/978-3-031-03873-0_7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Magnetic Resonance Electrical Impedance Tomography (MREIT) is a high-resolution bioimpedance imaging technique that has developed over a period beginning in the early 1990s to measure low-frequency (<1 kHz) tissue electrical properties. Low-frequency electrical properties are particularly important because they provide valuable information on cell structures and ionic composition of tissues, which may be very useful for diagnostic purposes. MREIT uses one component of the magnetic flux density data induced due to an exogenous-current administration, measured using an MRI machine, to reconstruct isotropic or anisotropic electrical property distributions. The MREIT technique typically requires two linearly independent current administrations to reconstruct conductivity uniquely. Since its invention, researchers have explored its potential for measuring electrical conductivity in regions such as the brain and muscle tissue. It has also been investigated in disease models, for example, cerebral ischemia and early tumor detection. In this chapter, we aim to provide a solid foundation of the different MREIT image reconstruction algorithms, including both isotropic and anisotropic conductivity reconstruction approaches. We will also explore the newly developed diffusion tensor magnetic resonance electrical impedance tomography (DT-MREIT) method, a practical method for anisotropic tissue property imaging, at the end of the chapter.
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Affiliation(s)
- Saurav Z K Sajib
- School of Biological Health System Engineering, Arizona State University, Tempe, AZ, USA
| | - Rosalind Sadleir
- School of Biological Health System Engineering, Arizona State University, Tempe, AZ, USA.
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Magnetic Resonance Current Density Imaging (MR-CDI). ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2022; 1380:135-155. [DOI: 10.1007/978-3-031-03873-0_6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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Chauhan M, Sadleir R. Phantom Construction and Equipment Configurations for Characterizing Electrical Properties Using MRI. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2022; 1380:83-110. [PMID: 36306095 DOI: 10.1007/978-3-031-03873-0_4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Phantom objects are commonly employed in MRI systems as stable substitutes for biological tissues to ensure systems for measuring images are operating correctly and safely. For magnetic resonance electrical impedance tomography (MREIT) and magnetic resonance electrical property tomography (MREPT), conductivity or permittivity phantoms play an important role in checking MRI pulse sequences, MREIT equipment performance, and algorithm validation. The construction of these phantoms is explained in this chapter. In the first part, materials used for phantom construction are introduced. Ingredients for modifying the electromagnetic properties and relaxation times are presented, and the advantages and disadvantages of aqueous, gel, and hybrid conductivity phantoms are explained. The devices and methods used to confirm phantom electromagnetic properties are explained. Next, different types of MREIT electrode materials and the constant current sources used for MREIT studies are discussed. In the last section, we present the results of previous MREIT and MREPT studies.
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Affiliation(s)
- Munish Chauhan
- School of Biological and Health Systems Engineering, Arizona State University, Tempe, AZ, USA
| | - Rosalind Sadleir
- School of Biological and Health Systems Engineering, Arizona State University, Tempe, AZ, USA.
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