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Fuentes-Barría H, Aguilera-Eguía R, Angarita-Dávila LC, Alarcón-Rivera M, Salazar-Orellana C, Maureira-Sánchez J, Guzmán-Muñoz E. [Heart rate in community programs: is it sufficient as a physical fitness indicator?]. NUTR HOSP 2025; 42:396-397. [PMID: 39898449 DOI: 10.20960/nh.05648] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2025] Open
Abstract
Introduction
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Affiliation(s)
| | - Raúl Aguilera-Eguía
- Departamento de Salud Pública. Facultad de Medicina. Universidad Católica de la Santísima Concepción
| | | | - Miguel Alarcón-Rivera
- Escuela de Ciencias del Deporte y Actividad Física. Facultad de Salud. Universidad Santo Tomás
| | | | - Juan Maureira-Sánchez
- Programa de Doctorado en Educación. Facultad de Educación. Universidad Bernardo O´Higgins
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Moradinasab N, Sharma S, Bar-Yoseph R, Radom-Aizik S, Bilchick KC, Cooper DM, Weltman A, Brown DE. Universal representation learning for multivariate time series using the instance-level and cluster-level supervised contrastive learning. Data Min Knowl Discov 2024; 38:1493-1519. [PMID: 39949582 PMCID: PMC11825059 DOI: 10.1007/s10618-024-01006-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2023] [Accepted: 01/02/2024] [Indexed: 02/16/2025]
Abstract
The multivariate time series classification (MTSC) task aims to predict a class label for a given time series. Recently, modern deep learning-based approaches have achieved promising performance over traditional methods for MTSC tasks. The success of these approaches relies on access to the massive amount of labeled data (i.e., annotating or assigning tags to each sample that shows its corresponding category). However, obtaining a massive amount of labeled data is usually very time-consuming and expensive in many real-world applications such as medicine, because it requires domain experts' knowledge to annotate data. Insufficient labeled data prevents these models from learning discriminative features, resulting in poor margins that reduce generalization performance. To address this challenge, we propose a novel approach: supervised contrastive learning for time series classification (SupCon-TSC). This approach improves the classification performance by learning the discriminative low-dimensional representations of multivariate time series, and its end-to-end structure allows for interpretable outcomes. It is based on supervised contrastive (SupCon) loss to learn the inherent structure of multivariate time series. First, two separate augmentation families, including strong and weak augmentation methods, are utilized to generate augmented data for the source and target networks, respectively. Second, we propose the instance-level, and cluster-level SupCon learning approaches to capture contextual information to learn the discriminative and universal representation for multivariate time series datasets. In the instance-level SupCon learning approach, for each given anchor instance that comes from the source network, the low-variance output encodings from the target network are sampled as positive and negative instances based on their labels. However, the cluster-level approach is performed between each instance and cluster centers among batches, as opposed to the instance-level approach. The cluster-level SupCon loss attempts to maximize the similarities between each instance and cluster centers among batches. We tested this novel approach on two small cardiopulmonary exercise testing (CPET) datasets and the real-world UEA Multivariate time series archive. The results of the SupCon-TSC model on CPET datasets indicate its capability to learn more discriminative features than existing approaches in situations where the size of the dataset is small. Moreover, the results on the UEA archive show that training a classifier on top of the universal representation features learned by our proposed method outperforms the state-of-the-art approaches.
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Affiliation(s)
- Nazanin Moradinasab
- Department of Engineering Systems and Environment, University of Virginia, Charlottesville, VA 22904, USA
| | - Suchetha Sharma
- School of Data Science, University of Virginia, Charlottesville, VA 22904, USA
| | - Ronen Bar-Yoseph
- Pediatric Exercise and Genomics Research Center, University of California, Irvine, CA 92697, USA
- Pediatric Pulmonary Institute, Ruth Rappaport Children’s Hospital, Rambam Health Care Campus, 3109601 Haifa, Israel
| | - Shlomit Radom-Aizik
- Pediatric Exercise and Genomics Research Center, University of California, Irvine, CA 92697, USA
| | - Kenneth C. Bilchick
- Cardiovascular Division, Department of Medicine, University of Virginia Health System, Charlottesville, VA 22903, USA
| | - Dan M. Cooper
- Pediatric Exercise and Genomics Research Center, University of California, Irvine, CA 92697, USA
- Institute for Clinical and Translational Science, University of California, Irvine, CA 92697, USA
| | - Arthur Weltman
- Department of Kinesiology, University of Virginia, Charlottesville, VA 22903, USA
- Division of Endocrinology and Metabolism, Department of Medicine, University of Virginia, Charlottesville, VA 22903, USA
| | - Donald E. Brown
- Department of Engineering Systems and Environment, University of Virginia, Charlottesville, VA 22904, USA
- School of Data Science, University of Virginia, Charlottesville, VA 22904, USA
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Coronato N, Brown DE, Sharma Y, Bar-Yoseph R, Radom-Aizik S, Cooper DM. Functional Data Analysis for Predicting Pediatric Failure to Complete Ten Brief Exercise Bouts. IEEE J Biomed Health Inform 2022; 26:5953-5963. [PMID: 36103443 PMCID: PMC10011010 DOI: 10.1109/jbhi.2022.3206100] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
Physiological response to physical exercise through analysis of cardiopulmonary measurements has been shown to be predictive of a variety of diseases. Nonetheless, the clinical use of exercise testing remains limited because interpretation of test results requires experience and specialized training. Additionally, until this work no methods have identified which dynamic gas exchange or heart rate responses influence an individual's decision to start or stop physical activity. This research examines the use of advanced machine learning methods to predict completion of a test consisting of multiple exercise bouts by a group of healthy children and adolescents. All participants could complete the ten bouts at low or moderate-intensity work rates, however, when the bout work rates were high-intensity, 50% refused to begin the subsequent exercise bout before all ten bouts had been completed (task failure). We explored machine learning strategies to model the relationship between the physiological time series, the participant's anthropometric variables, and the binary outcome variable indicating whether the participant completed the test. The best performing model, a generalized spectral additive model with functional and scalar covariates, achieved 93.6% classification accuracy and an F1 score of 93.5%. Additionally, functional analysis of variance testing showed that participants in the 'failed' and 'success' groups have significantly different functional means in three signals: heart rate, oxygen uptake rate, and carbon dioxide uptake rate. Overall, these results show the capability of functional data analysis with generalized spectral additive models to identify key differences in the exercise-induced responses of participants in multiple bout exercise testing.
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Affiliation(s)
| | | | - Yash Sharma
- University of Virginia, Charlottesville, VA, USA
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