Protein structural deformation induced lifetime shortening of photosynthetic bacteria light-harvesting complex LH2 excited state

Excitation energy transfer in proteoliposomes reconstituted with LH2 and RC-LH1 complexes from Rhodobacter sphaeroides

Light-harvesting 2 (LH2) and reaction-centre light-harvesting 1 (RC-LH1) complexes purified from the photosynthetic bacterium Rhodobacter (Rba.) sphaeroides were reconstituted into proteoliposomes either separately, or together at three different LH2:RC-LH1 ratios, for excitation energy transfer studies. Atomic force microscopy (AFM) was used to investigate the distribution and association of the complexes within the proteoliposome membranes. Absorption and fluorescence emission spectra were similar for LH2 complexes in detergent and liposomes, indicating that reconstitution retains the structural and optical properties of the LH2 complexes. Analysis of fluorescence emission shows that when LH2 forms an extensive series of contacts with other such complexes, fluorescence is quenched by 52.6 ± 1.4%. In mixed proteoliposomes, specific excitation of carotenoids in LH2 donor complexes resulted in emission of fluorescence from acceptor RC-LH1 complexes engineered to assemble with no carotenoids. Extents of energy transfer were measured by fluorescence lifetime microscopy; the 0.72 ± 0.08 ns lifetime in LH2-only membranes decreases to 0.43 ± 0.04 ns with a ratio of 2:1 LH2 to RC-LH1, and to 0.35 ± 0.05 ns for a 1:1 ratio, corresponding to energy transfer efficiencies of 40 ± 14% and 51 ± 18%, respectively. No further improvement is seen with a 0.5:1 LH2 to RC-LH1 ratio. Thus, LH2 and RC-LH1 complexes perform their light harvesting and energy transfer roles when reconstituted into proteoliposomes, providing a way to integrate native, non-native, engineered and de novo designed light-harvesting complexes into functional photosynthetic systems.

Theoretical and Experimental Investigation of the Electronic Propensity Rule: A Linear Relationship between Radiative and Nonradiative Decay Rates of Molecules

The electronic propensity rule, which suggests a proportional relationship between radiative and nonradiative electronic coupling elements in fluorescent molecules, has been postulated for some time. Despite its potential significance, the rule has not been rigorously derived and experimentally validated. In this work, we draw upon the theoretical framework established by Schuurmans et al. for the relation between the radiative and nonradiative electronic coupling elements of the rare earth metal in the crystal at low temperature and extend their approach to the fluorescent molecules under external electric field perturbation at a fixed energy gap and varied temperatures, with a further single-electron approximation (Schuurmans, M. F. H., et al. Physica B & C 1984, 123, 131-155). We obtained a linear relation between the radiative decay rates and nonradiative decay rates for internal conversion, which is verified by experimental data from two types of dextran-dye complexes and the light-harvesting antenna complex in photosynthetic bacteria.

Impact of the lipid bilayer on energy transfer kinetics in the photosynthetic protein LH2

Photosynthetic purple bacteria convert solar energy to chemical energy with near unity quantum efficiency. The light-harvesting process begins with absorption of solar energy by an antenna protein called Light-Harvesting Complex 2 (LH2). Energy is subsequently transferred within LH2 and then through a network of additional light-harvesting proteins to a central location, termed the reaction center, where charge separation occurs. The energy transfer dynamics of LH2 are highly sensitive to intermolecular distances and relative organizations. As a result, minor structural perturbations can cause significant changes in these dynamics. Previous experiments have primarily been performed in two ways. One uses non-native samples where LH2 is solubilized in detergent, which can alter protein structure. The other uses complex membranes that contain multiple proteins within a large lipid area, which make it difficult to identify and distinguish perturbations caused by protein-protein interactions and lipid-protein interactions. Here, we introduce the use of the biochemical platform of model membrane discs to study the energy transfer dynamics of photosynthetic light-harvesting complexes in a near-native environment. We incorporate a single LH2 from Rhodobacter sphaeroides into membrane discs that provide a spectroscopically amenable sample in an environment more physiological than detergent but less complex than traditional membranes. This provides a simplified system to understand an individual protein and how the lipid-protein interaction affects energy transfer dynamics. We compare the energy transfer rates of detergent-solubilized LH2 with those of LH2 in membrane discs using transient absorption spectroscopy and transient absorption anisotropy. For one key energy transfer step in LH2, we observe a 30% enhancement of the rate for LH2 in membrane discs compared to that in detergent. Based on experimental results and theoretical modeling, we attribute this difference to tilting of the peripheral bacteriochlorophyll in the B800 band. These results highlight the importance of well-defined systems with near-native membrane conditions for physiologically-relevant measurements.

Fast Photochemical Oxidation of Proteins Maps the Topology of Intrinsic Membrane Proteins: Light-Harvesting Complex 2 in a Nanodisc

Although membrane proteins are crucial participants in photosynthesis and other biological processes, many lack high-resolution structures. Prior to achieving a high-resolution structure, we are investigating whether MS-based footprinting can provide coarse-grained protein structure by following structural changes that occur upon ligand binding, pH change, and membrane binding. Our platform probes topology and conformation of membrane proteins by combining MS-based footprinting, specifically fast photochemical oxidation of proteins (FPOP), and lipid Nanodiscs, which are more similar to the native membrane environment than are the widely used detergent micelles. We describe here results that show a protein's outer membrane regions are more heavily footprinted by OH radicals whereas the regions spanning the lipid bilayer remain inert to the labeling. Nanodiscs generally exhibit more protection of membrane proteins compared to detergent micelles and less shielding to those protein residues that exist outside the membrane. The combination of immobilizing the protein in Nanodiscs and footprinting with FPOP is a feasible approach to map extra-membrane protein surfaces, even at the amino-acid level, and to illuminate intrinsic membrane protein topology.

Challenges facing an understanding of the nature of low-energy excited states in photosynthesis

While the majority of the photochemical states and pathways related to the biological capture of solar energy are now well understood and provide paradigms for artificial device design, additional low-energy states have been discovered in many systems with obscure origins and significance. However, as low-energy states are naively expected to be critical to function, these observations pose important challenges. A review of known properties of low energy states covering eight photochemical systems, and options for their interpretation, are presented. A concerted experimental and theoretical research strategy is suggested and outlined, this being aimed at providing a fully comprehensive understanding.

Quenching Capabilities of Long-Chain Carotenoids in Light-Harvesting-2 Complexes from Rhodobacter sphaeroides with an Engineered Carotenoid Synthesis Pathway

Six light-harvesting-2 complexes (LH2) from genetically modified strains of the purple photosynthetic bacterium Rhodobacter (Rb.) sphaeroides were studied using static and ultrafast optical methods and resonance Raman spectroscopy. These strains were engineered to incorporate carotenoids for which the number of conjugated groups (N = N_C=C + N_C=O) varies from 9 to 15. The Rb. sphaeroides strains incorporate their native carotenoids spheroidene (N = 10) and spheroidenone (N = 11), as well as longer-chain analogues including spirilloxanthin (N = 13) and diketospirilloxantion (N = 15) normally found in Rhodospirillum rubrum. Measurements of the properties of the carotenoid first singlet excited state (S₁) in antennas from the Rb. sphaeroides set show that carotenoid-bacteriochlorophyll a (BChl a) interactions are similar to those in LH2 complexes from various other bacterial species and thus are not significantly impacted by differences in polypeptide composition. Instead, variations in carotenoid-to-BChl a energy transfer are primarily regulated by the N-determined energy of the carotenoid S₁ excited state, which for long-chain (N ≥ 13) carotenoids is not involved in energy transfer. Furthermore, the role of the long-chain carotenoids switches from a light-harvesting supporter (via energy transfer to BChl a) to a quencher of the BChl a S₁ excited state B850*. This quenching is manifested as a substantial (∼2-fold) reduction of the B850* lifetime and the B850* fluorescence quantum yield for LH2 housing the longest carotenoids.

Hybrid system of semiconductor and photosynthetic protein

Photosynthetic protein has the potential to be a new attractive material for solar energy absorption and conversion. The development of semiconductor/photosynthetic protein hybrids is an example of recent progress toward efficient, clean and nanostructured photoelectric systems. In the review, two biohybrid systems interacting through different communicating methods are addressed: (1) a photosynthetic protein immobilized semiconductor electrode operating via electron transfer and (2) a hybrid of semiconductor quantum dots and photosynthetic protein operating via energy transfer. The proper selection of materials and functional and structural modification of the components and optimal conjugation between them are the main issues discussed in the review. In conclusion, we propose the direction of future biohybrid systems for solar energy conversion systems, optical biosensors and photoelectric devices.

Nanoantenna enhanced emission of light-harvesting complex 2: the role of resonance, polarization, and radiative and non-radiative rates

Nanoantennae show potential for photosynthesis research: by resonant near-field coupling to light-harvesting complexes both the localized excitation field and the quantum efficiency are enhanced, resulting in bright photon emission.

Single-molecule spectroscopy reveals photosynthetic LH2 complexes switch between emissive states

Photosynthetic organisms flourish under low light intensities by converting photoenergy to chemical energy with near unity quantum efficiency and under high light intensities by safely dissipating excess photoenergy and deleterious photoproducts. The molecular mechanisms balancing these two functions remain incompletely described. One critical barrier to characterizing the mechanisms responsible for these processes is that they occur within proteins whose excited-state properties vary drastically among individual proteins and even within a single protein over time. In ensemble measurements, these excited-state properties appear only as the average value. To overcome this averaging, we investigate the purple bacterial antenna protein light harvesting complex 2 (LH2) from Rhodopseudomonas acidophila at the single-protein level. We use a room-temperature, single-molecule technique, the anti-Brownian electrokinetic trap, to study LH2 in a solution-phase (nonperturbative) environment. By performing simultaneous measurements of fluorescence intensity, lifetime, and spectra of single LH2 complexes, we identify three distinct states and observe transitions occurring among them on a timescale of seconds. Our results reveal that LH2 complexes undergo photoactivated switching to a quenched state, likely by a conformational change, and thermally revert to the ground state. This is a previously unobserved, reversible quenching pathway, and is one mechanism through which photosynthetic organisms can adapt to changes in light intensities.

Ultrafast time-resolved spectroscopy of the light-harvesting complex 2 (LH2) from the photosynthetic bacterium Thermochromatium tepidum

The light-harvesting complex 2 from the thermophilic purple bacterium Thermochromatium tepidum was purified and studied by steady-state absorption and fluorescence, sub-nanosecond-time-resolved fluorescence and femtosecond time-resolved transient absorption spectroscopy. The measurements were performed at room temperature and at 10 K. The combination of both ultrafast and steady-state optical spectroscopy methods at ambient and cryogenic temperatures allowed the detailed study of carotenoid (Car)-to-bacteriochlorophyll (BChl) as well BChl-to-BChl excitation energy transfer in the complex. The studies show that the dominant Cars rhodopin (N=11) and spirilloxanthin (N=13) do not play a significant role as supportive energy donors for BChl a. This is related with their photophysical properties regulated by long π-electron conjugation. On the other hand, such properties favor some of the Cars, particularly spirilloxanthin (N=13) to play the role of the direct quencher of the excited singlet state of BChl.

Long-range energy propagation in nanometer arrays of light harvesting antenna complexes

Here we report the first observation of long-range transport of excitation energy within a biomimetic molecular nanoarray constructed from LH2 antenna complexes from Rhodobacter sphaeroides. Fluorescence microscopy of the emission of light after local excitation with a diffraction-limited light beam reveals long-range transport of excitation energy over micrometer distances, which is much larger than required in the parent bacterial system. The transport was established from the influence of active energy-guiding layers on the observed fluorescence emission. We speculate that such an extent of energy migration occurs as a result of efficient coupling between many hundreds of LH2 molecules. These results demonstrate the potential for long-range energy propagation in hybrid systems composed of natural light harvesting antenna molecules from photosynthetic organisms.

Structure-dependent wavelike energy transfer on pigment rings of individual light-harvesting-2 complexes from photosynthetic bacteria

This paper studies the transfer behavior of electronic excitations on the circular and elliptically deformed B850 rings theoretically. It shows that degree of delocalization of the electronic excitation is dependent on the kinds of measured electronically excited states and the kinds of studied structures. It finds that if initial excitation is a coherent exciton, then the elliptical deformation of the B850 ring will work against energy transfer. It depicts wavelike energy transfer persisting for several hundred femtoseconds on the circular and elliptically deformed B850 rings at cryogenic temperature and finds that under the deformation, inducing localized excitation at the site near the elliptical major axis will be in favor of energy transfer, whereas at the minor axis will work against energy transfer both visibly in wavelike region.

Interaction of nano-TiO2 with lysozyme: insights into the enzyme toxicity of nanosized particles

BACKGROUND, AIM, AND SCOPE

Nanomaterials have been used increasingly in industrial production and daily life, but their human exposure may cause health risks. The interactions of nanomaterial with functional biomolecules are often applied as a precondition for its cytotoxicity and organ toxicity where various proteins have been investigated in the past years. In the present study, nano-TiO(2) was selected as the representative of nanomaterials and lysozyme as a representative for enzymes. By investigating their interaction by various instrumentations, the objective is to identify the action sites and types, estimate the effect on the enzyme structure and activity, and reveal the toxicity mechanism of nanomaterial.

MATERIALS AND METHODS

Laboratory-scale experiments were carried out to investigate the interactions of nano-TiO(2) with lysozyme. The interaction of nano-TiO(2) particles with lysozyme has been studied in the analogous physiological media in detail by UV spectrometry, fluorophotometry, circular dichroism (CD), scanning electron microscope, zeta-potential, and laser particle size.

RESULTS

The interaction accorded with the Langmuir isothermal adsorption and the saturation number of lysozyme is determined to be 580 per nano-TiO(2) particle (60 nm of size) with 4.7 x 10(6) M(-1) of the stability constant in the physiological media. The acidity and ion strength of the media obviously affected the binding of lysozyme. The warping and deformation of the lysozyme bridging were demonstrated by the conversion of its spatial structure from alpha-helix into a beta-sheet, measured by CD. In the presence of nano-TiO(2), the bacteriolysis activity of lysozyme was subjected to an obvious inhibition.

DISCUSSION

The two-step binding model of lysozyme was proposed, in which lysozyme was adsorbed on nano-TiO(2) particle surface by electrostatic interaction and then the hydrogen bond (N-H...O and O-H...O) formed between nano-TiO(2) particle and polar side groups of lysozyme. The adsorption of lysozyme obeyed the Langmuir isothermal model. The binding of lysozyme is dependent on the acidity and ion strength of the media. The bigger TiO(2) aggregate was formed in the presence of lysozyme where lysozyme may bridge between nano-TiO(2) particles. The coexistence of nano-TiO(2) particles resulted in the transition of lysozyme conformation from an alpha-helix into a beta-sheet and a substantial inactivation of lysozyme. The beta-sheet can induce the formation of amyloid fibrils, a process which plays a major role in pathology.

CONCLUSIONS

Lysozyme was adsorbed on the nano-TiO(2) particle surface via electrostatic attraction and hydrogen bonds, and they also bridged among global nano-TiO(2) particles to form the colloidal particles. As a reasonable deduction of this study, nano-TiO(2) might have some toxic impacts on biomolecules. Our data suggest that careful attention be paid to the interaction of protein and nanomaterials. This could contribute to nanomaterial toxicity assessment.

RECOMMENDATIONS AND PERSPECTIVES

Our results strongly suggest that nano-TiO(2) has an obvious impact on biomolecules. Our data suggest that more attention should be paid to the potential toxicity of nano-TiO(2) on biomolecules. Further research into the toxicity of nanosized particles needs to be carried out prior to their cell toxicity and tissue toxicity. These investigations might serve as the basis for determining the toxicity and application of nanomaterials.

Fluorescence quenching in a perylenetetracarboxylic diimide trimer

A perylenetetracarboxylic diimide (PDI) trimer (3) linked by a triazine ring has been prepared. The UV-vis absorption spectra together with the (1)H NMR spectra revealed that two of the three PDI subunits in the trimer presents a face-to-face stacked configuration while the third one appended acts as a monomer. There is no strong interaction between the dimer and monomer at ground state. However, the fluorescence of the monomer was quenched efficiently by the dimer. The transient absorption and excitation spectra of this compound suggest that the energy transfer from the excited states of monomer to an excimer like state of dimer is responsible for this quick and efficient fluorescence quenching. The rate of the energy transfer is comparable to that from B800 to B850 in LH2.

Comparison of the fluorescence kinetics of detergent-solubilized and membrane-reconstituted LH2 complexes from Rps. acidophila and Rb. sphaeroides

Picosecond time-resolved fluorescence spectroscopy has been used in order to compare the fluorescence kinetics of detergent-solubilized and membrane-reconstituted light-harvesting 2 (LH2) complexes from the purple bacteria Rhodopseudomonas (Rps.) acidophila and Rhodobacter (Rb.) sphaeroides. LH2 complexes were reconstituted in phospholipid model membranes at different lipid:protein-ratios and all samples were studied exciting with a wide range of excitation densities. While the detergent-solubilized LH2 complexes from Rps. acidophila showed monoexponential decay kinetics (tau(f )= 980 ps) for excitation densities of up to 3.10(13) photons/(pulse.cm(2)), the membrane-reconstituted LH2 complexes showed multiexponential kinetics even at low excitation densities and high lipid:protein-ratios. The latter finding indicates an efficient clustering of LH2 complexes in the phospholipid membranes. Similar results were obtained for the LH2 complexes from Rb. sphaeroides.

Porphyrin-Appended Europium(III) Bis(phthalocyaninato) Complexes: Synthesis, Characterization, and Photophysical Properties

Mixed cyclization of 3-mono-, 4-mono-, or 4,5-di(porphyrinated) phthalonitrile compounds 2, 3, or 6 and unsubstituted phthalonitrile with the half-sandwich complex [EuIII(acac)(Pc)] (Pc=phthalocyaninate, acac=acetylacetonate) as the template in the presence of 1,8-diazabicyclo[5.4.0]undec-7-ene (DBU) in n-pentanol afforded novel porphyrin-appended europium(III) bis(phthalocyaninato) complexes 7-9 in 30-40% yield. These mixed tetrapyrrole triads and tetrad were spectroscopically and electrochemically characterized and their photophysical properties were also investigated with steady-state and transient spectroscopic methods. It has been found that the fluorescence of the porphyrin moiety is quenched effectively by the double-decker unit through an intramolecular photoinduced electron-transfer process, which takes place in several hundred femtoseconds, while the recombination of the charge-separated state occurs in several picoseconds. By using different phthalocyanines containing different numbers of porphyrin substituents at the peripheral or nonperipheral position(s) of the ligand, while the other unsubstituted phthalocyanine remains unchanged in these double-deckers, the effects of the number and the position of the porphyrin substituents on these photophysical processes were also examined.