Mechanistic Studies on the Photochemical Deprotection of 3′,5′-Dimethoxybenzoin Esters

Time-Resolved Spectroscopic Study of a Photoinduced Intramolecular Chloride Exchange Reaction of 3',5'-Dimethoxybenzoin Chloride

Photoremovable protecting groups are of great importance due to their remote control over the liberation of diverse reactive species temporally and spatially, including biologically active compounds and functional groups. Here, an in-depth investigation on the heterolysis-solvolysis reaction mechanisms of a photoremovable protecting group, 3',5'-dimethoxybenzoin (DMB) chloride, has been accomplished. With the aid of transient absorption and time-resolved resonance Raman spectroscopies, the features of the intermediates that emerged from the photolysis process were directly observed. Elaborate optical and theoretical studies on DMB chloride have suggested a long-lived α-keto cation intermediate (0.9 ms) exists as a key intermediate, unlike the radical intermediates that are typically generated in such photocyclization reactions. After undergoing nucleophilic addition and isomerization, the intermediate species eventually leads to the formation of the final product(s).

Photodeprotection Reaction Mechanisms of Caged Species Utilizing a Photochromism Function

Acetoxy-1,2,2-tri(aryl)ethanone (1) is a novel and visual release-and-report system that contains the photochromic diarylethylene function attached to the photocage dimethoxybenzoin platform. However, the mechanism of 1 cyclization and a subsequent deprotection remains unclear. Here, we use femtosecond and nanosecond transient absorption spectroscopies in combination with density functional theory computations to study the detailed reaction mechanism. The photodeprotection proceeds with competition between pathways initiated by two different configurations of the singlet excited state of 1 (labeled as ¹1_LE and ¹1_CT); the stepwise elimination after cyclization of ¹1_LE constitutes the predominant pathway, whereas the concerted removal of acetic acid after cyclization of ¹1_CT is the minor pathway. These results contribute to a detailed photodeprotection mechanism of 1 and provide new insights into the effect of geometric configurations of intermediates on the photodeprotection pathways. This new information can help in the further development of this type of the photolabile protecting group (PPG) for the protection of biorelevant molecules and in the design of an improved and versatile release-and-report PPG.

Investigations on the Photochemical Reaction Mechanisms of Selected Dibenzoylmethane Compounds

In this work, combined time-resolved spectroscopies of femtosecond transient absorption, nanosecond transient absorption, and DFT calculations were performed to unravel the photocyclization reaction mechanisms of selected dibenzoylmethane (DBM) derivatives, including 2-chloro-1,3-diphenylpropan-1,3-dione (1a), 2-chloro-1-(3,5-dimethoxyphenyl)-3-phenylpropan-1,3-dione (1b), 2-chloro-2-fluoro-1,3-diphenylpropan-1,3-dione (1c), and 2-chloro-2-fluoro-1,3-di(4-methoxyphenyl)propan-1,3-dione (1d). Photocyclization reaction mechanisms for 1a and 1b are similar, where a C-Cl heterolysis occurs yielding an α-ketocation intermediate, followed by cyclization to generate the cation species. On the other hand, 1c and 1d undergo dechlorination primarily producing a radical species, which further experiences cyclization yielding cyclized radical species. The dominant factor leading to the different reaction mechanisms is the involvement of a fluorine atom bonded at α-C. Due to the meta-effect, the p-methoxy substitution on the benzene ring inhibits the photocyclization reaction and reduces the yield of photocyclization.

Di-Cysteine S,S-Tetrazine: A Potential Ultra-fast Photochemical Trigger to Explore the Early Events of Peptide/Protein Folding

The tetrazine chromophore holds promise as an effective photochemical trigger to achieve structural release, directed at the determination of peptide/protein motions that occur early in the folding processes. The photochemistry of 3,6-di-cysteine-S,S-tetrazines was examined by femtosecond IR transient absorption spectroscopy. Excitation of the tetrazine chromophore by visible and near UV light in the end yields chemically inert, structurally unobtrusive photoproducts that are not expected to interfere with the conformational dynamics of peptides and proteins. Dicysteine S,S-tetrazine is suggested to undergo photocleavage via a photochemical pathway different than the parent molecule s-tetrazine, based on kinetic measurements that reveal a stepwise reaction pathway of photofragmentation, whereby the initial ring cleavage event occurs prior to the formation of the SCN groups.