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Vyšín L, Wachulak P, Hájková V, Davídková M, Fiedorowicz H, Bartnik A, Juha L. Breaking the DNA by soft X-rays in the water window reveals the scavenging and temporal behaviour of ·OH radicals. Sci Rep 2024; 14:28515. [PMID: 39557928 PMCID: PMC11574138 DOI: 10.1038/s41598-024-79328-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2024] [Accepted: 11/07/2024] [Indexed: 11/20/2024] Open
Abstract
A laser-plasma source emitting photons with energies in the water window spectral range has been used to reveal the radiation chemical yields of single-strand breaks in plasmid DNA as a function of ·OH radical scavenger concentration. Direct and indirect effects were investigated separately using DNA samples with various levels of hydration. We experimentally determined the value of the efficiency factor for strand cleavage in DNA caused by the reaction with ·OH radicals at 0.11, which was previously found in the theoretical studies. Additionally, the radiation chemical yield of ·OH radicals specific to the water window radiation emission of the source was determined by comparison with the gamma radiation-induced strand break yields. The ·OH radical yield determined using the plasmid DNA samples as a model was similar to the yield found using sensitive fluorescent dosimeters in previous experiments.
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Affiliation(s)
- Luděk Vyšín
- Institute of Physics of the Czech Academy of Sciences, Na Slovance 1999/2, 182 00, Prague 8, Czech Republic.
| | - Przemyslaw Wachulak
- Institute of Optoelectronics, Military University of Technology, Kaliskiego 2 Str., 00-908, Warsaw, Poland
| | - Věra Hájková
- Institute of Physics of the Czech Academy of Sciences, Na Slovance 1999/2, 182 00, Prague 8, Czech Republic
| | - Marie Davídková
- Nuclear Physics Institute of the Czech Academy of Sciences, Řež 130, 250 68, Řež, Czech Republic
| | - Henryk Fiedorowicz
- Institute of Optoelectronics, Military University of Technology, Kaliskiego 2 Str., 00-908, Warsaw, Poland
| | - Andrzej Bartnik
- Institute of Optoelectronics, Military University of Technology, Kaliskiego 2 Str., 00-908, Warsaw, Poland
| | - Libor Juha
- Institute of Physics of the Czech Academy of Sciences, Na Slovance 1999/2, 182 00, Prague 8, Czech Republic
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Vyšín L, Tomanová K, Pavelková T, Wagner R, Davídková M, Múčka V, Čuba V, Juha L. Degradation of phospholipids under different types of irradiation and varying oxygen saturation. RADIATION AND ENVIRONMENTAL BIOPHYSICS 2017; 56:241-247. [PMID: 28500389 DOI: 10.1007/s00411-017-0693-6] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/12/2016] [Accepted: 05/04/2017] [Indexed: 06/07/2023]
Abstract
The effects of different types of radiation on the formation of peroxide forms of 2-dioleoyl-sn-glycero-3-phosphocholine were studied under various conditions. For the irradiation, an aqueous solution of small unilamellar vesicles was prepared. Variations in parameters such as the dose rate and molecular oxygen saturation levels were evaluated. Our study suggests that the mechanism of the peroxides formation process remains unchanged under irradiation by accelerated electrons, gamma and accelerated protons. The values of radiation chemical yields of the peroxidic form depend on the type of radiation, dose rate, and the saturation of molecular oxygen. The level of oxygen saturation strongly affects the values of radiation chemical yields as well, as the dissolved oxygen is an important agent participating in peroxidation and it is a source of free radicals during the radiolysis. The values of radiation chemical yields strongly suggest that the mechanism of radiation-induced peroxidation of phosphatidylcholines does not proceed via chain reaction.
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Affiliation(s)
- Luděk Vyšín
- Institute of Physics of the CAS, Na Slovance 1999/2, 182 21, Prague, Czech Republic.
- FNSPE, Czech Technical University in Prague, Břehová 7, 115 19, Prague, Czech Republic.
| | - Kateřina Tomanová
- FNSPE, Czech Technical University in Prague, Břehová 7, 115 19, Prague, Czech Republic
| | - Tereza Pavelková
- FNSPE, Czech Technical University in Prague, Břehová 7, 115 19, Prague, Czech Republic
| | - Richard Wagner
- Nuclear Physics Institute of the CAS, Husinec-Řež 130, 250 68, Řež, Czech Republic
| | - Marie Davídková
- Nuclear Physics Institute of the CAS, Husinec-Řež 130, 250 68, Řež, Czech Republic
| | - Viliam Múčka
- FNSPE, Czech Technical University in Prague, Břehová 7, 115 19, Prague, Czech Republic
| | - Václav Čuba
- FNSPE, Czech Technical University in Prague, Břehová 7, 115 19, Prague, Czech Republic
| | - Libor Juha
- Institute of Physics of the CAS, Na Slovance 1999/2, 182 21, Prague, Czech Republic
- Institute of Plasma Physics of the CAS, Za Slovankou 3, 182 00, Prague, Czech Republic
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Adjei D, Wiechec A, Wachulak P, Ayele MG, Lekki J, Kwiatek WM, Bartnik A, Davídková M, Vyšín L, Juha L, Pina L, Fiedorowicz H. DNA strand breaks induced by soft X-ray pulses from a compact laser plasma source. Radiat Phys Chem Oxf Engl 1993 2016. [DOI: 10.1016/j.radphyschem.2015.11.021] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Sato K, Nishikino M, Kawachi T, Shimokawa T, Imai T, Teshima T, Nishimura H, Kando M. A laser-plasma-produced soft X-ray laser at 89 eV generates DNA double-strand breaks in human cancer cells. JOURNAL OF RADIATION RESEARCH 2015; 56:633-638. [PMID: 25862698 PMCID: PMC4497388 DOI: 10.1093/jrr/rrv015] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/14/2014] [Revised: 01/28/2015] [Accepted: 03/06/2015] [Indexed: 06/04/2023]
Abstract
While it has been expected that X-ray laser will be widely applied to biomedical studies, this has not been achieved to date and its biological effects such as DNA damage have not been evaluated. As a first step for its biological application, we developed a culture cell irradiation system, particularly designed for a plasma-driven soft X-ray laser pulse, to investigate whether the soft X-ray laser is able to induce DNA double strand breaks (DSBs) in living cells or not. The human adenocarcimona cell line A549 was irradiated with the soft X-ray laser at a photon energy of 89 eV and the repair focus formation of the DSBs was assessed by immunofluorescence staining with antiphosphorylated DNA-PKcs (p-DNA-PKcs), ATM (p-ATM) and γ-H2AX antibody. The p-DNA-PKcs, ATM, and γ-H2AX foci were clearly identified after soft X-ray laser irradiation. Furthermore, the increase in the X-ray laser shot number, even from a single shot, results in the increase in p-DNA-PKcs foci. These results are the first evidence that the 89 eV soft X-ray laser is able to induce DSB in living cells. Our study demonstrated that this irradiation system is a useful tool for investigating the radiobiological effect of soft X-ray laser.
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Affiliation(s)
- Katsutoshi Sato
- Cancer Metastasis Research Team, Advanced Radiation Biology Research Program, Research Center for Charged Particle Therapy, National Institute of Radiological Sciences, 4-9-1 Anagawa, Inage-ku, Chiba, 263-8555, Japan
| | - Masaharu Nishikino
- X-ray Laser Application Group, Quantum Beam Science Directorate, Kansai Photon Science Institute, Japan Atonic Energy Agency, 8-1-7 Umemidai, Kizugawa, Kyoto, 619-0215, Japan
| | - Tetsuya Kawachi
- X-ray Laser Application Group, Quantum Beam Science Directorate, Kansai Photon Science Institute, Japan Atonic Energy Agency, 8-1-7 Umemidai, Kizugawa, Kyoto, 619-0215, Japan
| | - Takashi Shimokawa
- Cancer Metastasis Research Team, Advanced Radiation Biology Research Program, Research Center for Charged Particle Therapy, National Institute of Radiological Sciences, 4-9-1 Anagawa, Inage-ku, Chiba, 263-8555, Japan
| | - Takashi Imai
- Advanced Radiation Biology Research Program, Research Center for Charged Particle Therapy, National Institute of Radiological Sciences, 4-9-1 Anagawa, Inage-ku, Chiba, 263-8555, Japan
| | - Teruki Teshima
- Department of Radiation Oncology, Osaka Medical Center for Cancer and Cardiovascular Diseases, 1-3-3 Nakamichi, Higashinari-ku, Osaka, 537-8511 Japan
| | - Hiroaki Nishimura
- Institute of Laser Engineering, Osaka University, 2-6 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Masaki Kando
- Laser Electron Accelerator Group, Quantum Beam Science Directorate, Kansai Photon Science Institute, Japan Atonic Energy Agency, 8-1-7 Umemidai, Kizugawa, Kyoto, 619-0215, Japan
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Nováková E, Vyšín L, Burian T, Juha L, Davídková M, Múčka V, Čuba V, Grisham ME, Heinbuch S, Rocca JJ. Breaking DNA strands by extreme-ultraviolet laser pulses in vacuum. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2015; 91:042718. [PMID: 25974538 DOI: 10.1103/physreve.91.042718] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2015] [Indexed: 06/04/2023]
Abstract
Ionizing radiation induces a variety of DNA damages including single-strand breaks (SSBs), double-strand breaks (DSBs), abasic sites, modified sugars, and bases. Most theoretical and experimental studies have been focused on DNA strand scissions, in particular production of DNA double-strand breaks. DSBs have been proven to be a key damage at a molecular level responsible for the formation of chromosomal aberrations, leading often to cell death. We have studied the nature of DNA damage induced directly by the pulsed 46.9-nm (26.5 eV) radiation provided by an extreme ultraviolet (XUV) capillary-discharge Ne-like Ar laser (CDL). Doses up to 45 kGy were delivered with a repetition rate of 3 Hz. We studied the dependence of the yield of SSBs and DSBs of a simple model of DNA molecule (pBR322) on the CDL pulse fluence. Agarose gel electrophoresis method was used for determination of both SSB and DSB yields. The action cross sections of the single- and double-strand breaks of pBR322 plasmid DNA in solid state were determined. We observed an increase in the efficiency of strand-break induction in the supercoiled DNA as a function of laser pulse fluence. Results are compared to those acquired at synchrotron radiation facilities and other sources of extreme-ultraviolet and soft x-ray radiation.
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Affiliation(s)
- Eva Nováková
- Department of Radiation and Chemical Physics, Institute of Physics CAS, Na Slovance 2, Prague 8, 182 21, Czech Republic
| | - Luděk Vyšín
- Department of Radiation and Chemical Physics, Institute of Physics CAS, Na Slovance 2, Prague 8, 182 21, Czech Republic
- Department of Nuclear Chemistry, Faculty of Nuclear Sciences and Physical Engineering, Czech Technical University in Prague, Břehová 7, Prague 1, 115 19, Czech Republic
| | - Tomáš Burian
- Department of Radiation and Chemical Physics, Institute of Physics CAS, Na Slovance 2, Prague 8, 182 21, Czech Republic
| | - Libor Juha
- Department of Radiation and Chemical Physics, Institute of Physics CAS, Na Slovance 2, Prague 8, 182 21, Czech Republic
| | - Marie Davídková
- Department of Radiation Dosimetry, Institute of Nuclear Physics CAS, Na Truhlářce 39/64, Prague 8, 180 86, Czech Republic
| | - Viliam Múčka
- Department of Nuclear Chemistry, Faculty of Nuclear Sciences and Physical Engineering, Czech Technical University in Prague, Břehová 7, Prague 1, 115 19, Czech Republic
| | - Václav Čuba
- Department of Nuclear Chemistry, Faculty of Nuclear Sciences and Physical Engineering, Czech Technical University in Prague, Břehová 7, Prague 1, 115 19, Czech Republic
| | - Michael E Grisham
- NSF ERC for Extreme Ultraviolet Science and Technology, Department of Electrical and Computer Engineering, Colorado State University, Fort Collins, Colorado 80523-1373, USA
| | - Scott Heinbuch
- NSF ERC for Extreme Ultraviolet Science and Technology, Department of Electrical and Computer Engineering, Colorado State University, Fort Collins, Colorado 80523-1373, USA
| | - Jorge J Rocca
- NSF ERC for Extreme Ultraviolet Science and Technology, Department of Electrical and Computer Engineering, Colorado State University, Fort Collins, Colorado 80523-1373, USA
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Mozaffarieh M, Konieczka K, Hauenstein D, Schoetzau A, Flammer J. Half a pack of cigarettes a day more than doubles DNA breaks in circulating leukocytes. Tob Induc Dis 2010; 8:14. [PMID: 21083877 PMCID: PMC2996352 DOI: 10.1186/1617-9625-8-14] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2010] [Accepted: 11/17/2010] [Indexed: 11/10/2022] Open
Abstract
Background The mechanisms by which smoking induces damage is not known for all diseases. One mechanism believed to play a role is oxidative stress. Oxidative stress leads to cellular damage including DNA damage, particularly DNA breaks. We conducted this study to test the hypothesis that smokers have increased DNA breaks in their circulating leukocytes. Methods A comparative quantification of single-stranded DNA breaks was performed by comet assay analysis in the circulating leukocytes of ten healthy smokers (average smoking rate: half a pack a day, range: 9-12 cigarettes a day) and ten age and sex matched healthy non-smokers. DNA breaks lead to smaller pieces of DNA, which migrate out of the nucleus forming a tail during gel-electrophoresis. Damage of an individual cell was quantified by the parameters tail moment and olive moment. Results Smoking had a clear effect on both study parameters (tail and olive moment). Smokers had more than double the amount of ss-DNA breaks in their circulating leukocytes than non-smokers [tail moment: 0·75 AU [smokers] compared to 0·2 AU [non-smokers]; olive moment: 0·85 AU [smokers] compared to 0·3 AU [non-smokers]; both p < 0·001]. Conclusion Smoking half a pack a day interferes with DNA integrity. One potential explanation for the enhanced DNA breaks in smokers is oxidative stress.
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Affiliation(s)
- Maneli Mozaffarieh
- Department of Ophthalmology, University of Basel, Mittlere Strasse 91, CH-4031 Basel, Switzerland.
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Civiš S, Babánková D, Cihelka J, Sazama P, Juha L. Spectroscopic Investigations of High-Power Laser-Induced Dielectric Breakdown in Gas Mixtures Containing Carbon Monoxide. J Phys Chem A 2008; 112:7162-9. [DOI: 10.1021/jp712011t] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Svatopluk Civiš
- J. Heyrovsky Institute of Physical Chemistry, Academy of Sciences of the Czech Republic, Dolejskova 3, 182 23 Prague 8, Czech Republic, and Institute of Physics, Academy of Sciences of the Czech Republic, Na Slovance 2, 182 21 Prague 8, Czech Republic
| | - Dagmar Babánková
- J. Heyrovsky Institute of Physical Chemistry, Academy of Sciences of the Czech Republic, Dolejskova 3, 182 23 Prague 8, Czech Republic, and Institute of Physics, Academy of Sciences of the Czech Republic, Na Slovance 2, 182 21 Prague 8, Czech Republic
| | - Jaroslav Cihelka
- J. Heyrovsky Institute of Physical Chemistry, Academy of Sciences of the Czech Republic, Dolejskova 3, 182 23 Prague 8, Czech Republic, and Institute of Physics, Academy of Sciences of the Czech Republic, Na Slovance 2, 182 21 Prague 8, Czech Republic
| | - Petr Sazama
- J. Heyrovsky Institute of Physical Chemistry, Academy of Sciences of the Czech Republic, Dolejskova 3, 182 23 Prague 8, Czech Republic, and Institute of Physics, Academy of Sciences of the Czech Republic, Na Slovance 2, 182 21 Prague 8, Czech Republic
| | - Libor Juha
- J. Heyrovsky Institute of Physical Chemistry, Academy of Sciences of the Czech Republic, Dolejskova 3, 182 23 Prague 8, Czech Republic, and Institute of Physics, Academy of Sciences of the Czech Republic, Na Slovance 2, 182 21 Prague 8, Czech Republic
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