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Short- and long-term warming events on photosynthetic physiology, growth, and yields of field grown crops. Biochem J 2023; 480:999-1014. [PMID: 37418286 PMCID: PMC10422931 DOI: 10.1042/bcj20220433] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2023] [Revised: 06/15/2023] [Accepted: 06/16/2023] [Indexed: 07/08/2023]
Abstract
Global temperatures are rising from increasing concentrations of greenhouse gases in the atmosphere associated with anthropogenic activities. Global warming includes a warmer shift in mean temperatures as well as increases in the probability of extreme heating events, termed heat waves. Despite the ability of plants to cope with temporal variations in temperature, global warming is increasingly presenting challenges to agroecosystems. The impact of warming on crop species has direct consequences on food security, therefore understanding impacts and opportunities to adapt crops to global warming necessitates experimentation that allows for modification of growth environments to represent global warming scenarios. Published studies addressing crop responses to warming are extensive, however, in-field studies where growth temperature is manipulated to mimic global warming are limited. Here, we provide an overview of in-field heating techniques employed to understand crop responses to warmer growth environments. We then focus on key results associated with season-long warming, as expected with rising global mean temperatures, and with heat waves, as a consequence of increasing temperature variability and rising global mean temperatures. We then discuss the role of rising temperatures on atmospheric water vapor pressure deficit and potential implications for crop photosynthesis and productivity. Finally, we review strategies by which crop photosynthetic processes might be optimized to adapt crops to the increasing temperatures and frequencies of heat waves. Key findings from this review are that higher temperatures consistently reduce photosynthesis and yields of crops even as atmospheric carbon dioxide increases, yet potential strategies to minimize losses from high-temperature exist.
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Effect of Sowing Date and Environment on Phenology, Growth and Yield of Lentil ( Lens culinaris Medikus.) Genotypes. PLANTS (BASEL, SWITZERLAND) 2023; 12:474. [PMID: 36771562 PMCID: PMC9922022 DOI: 10.3390/plants12030474] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/22/2022] [Revised: 11/20/2022] [Accepted: 12/06/2022] [Indexed: 06/18/2023]
Abstract
Lentil, an important pulse crop in Australia, is sown soon after the onset of autumn rains and grows mainly under rainfed conditions. This study examined lentil phenological development, growth and grain yield under different sowing dates and environments in New South Wales (NSW). Eight lentil varieties were phenotyped over two years and four sowing times in southern NSW (Leeton, Wagga Wagga and Yanco (one year)) and central western NSW (Trangie). Time of sowing affected important agronomic traits, with a delay in sowing decreasing time to flowering and podding, biomass accumulation, plant height and position of bottom pod. Sowing earlier or later than optimum decreased grain yield. Yield was mainly determined by the number of pods and seeds per plant, with minimal impact from seed weight. Overall, yields were higher in favorable environments such Leeton experiment which received more water compared to the other sites which received less water. Averaged across sowing dates, the slower maturing PBA Greenfield was lower yielding whilst fast maturing varieties such as PBA Bolt and PBA Blitz yielded higher. PBA Jumbo2 is less sensitive to environmental interaction and thus broadly adapted to the diverse environments. Optimum sowing time was identified as the end of April to mid-May.
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Crop genomic selection with deep learning and environmental data: A survey. Front Artif Intell 2023; 5:1040295. [PMID: 36703955 PMCID: PMC9871498 DOI: 10.3389/frai.2022.1040295] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2022] [Accepted: 12/22/2022] [Indexed: 01/12/2023] Open
Abstract
Machine learning techniques for crop genomic selections, especially for single-environment plants, are well-developed. These machine learning models, which use dense genome-wide markers to predict phenotype, routinely perform well on single-environment datasets, especially for complex traits affected by multiple markers. On the other hand, machine learning models for predicting crop phenotype, especially deep learning models, using datasets that span different environmental conditions, have only recently emerged. Models that can accept heterogeneous data sources, such as temperature, soil conditions and precipitation, are natural choices for modeling GxE in multi-environment prediction. Here, we review emerging deep learning techniques that incorporate environmental data directly into genomic selection models.
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Foliar Spray of Micronutrients Alleviates Heat and Moisture Stress in Lentil ( Lens culinaris Medik) Grown Under Rainfed Field Conditions. FRONTIERS IN PLANT SCIENCE 2022; 13:847743. [PMID: 35463440 PMCID: PMC9021876 DOI: 10.3389/fpls.2022.847743] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/03/2022] [Accepted: 02/23/2022] [Indexed: 05/04/2023]
Abstract
The simultaneous occurrence of high temperature and moisture stress during the reproductive stage of lentil (Lens culinaris Medik) constrains yield potential by disrupting the plant defense system. We studied the detrimental outcomes of heat and moisture stress on rainfed lentils under residual moisture in a field experiment conducted on clay loam soil (Aeric Haplaquept) in eastern India from 2018 to 2019 and from 2019 to 2020 in winter seasons. Lentil was sown on two dates (November and December) to expose the later sowing to higher temperatures and moisture stress. Foliar sprays of boron (0.2% B), zinc (0.5% Zn), and iron (0.5% Fe) were applied individually or in combination at the pre-flowering and pod development stages. High temperatures increased malondialdehyde (MDA) content due to membrane degradation and reduced leaf chlorophyll content, net photosynthetic rate, stomatal conductance, water potential, and yield (kg ha-1). The nutrient treatments affected the growth and physiology of stressed lentil plants. The B+Fe treatment outperformed the other nutrient treatments for both sowing dates, increasing peroxidase (POX) and ascorbate peroxidase (APX) activities, chlorophyll content, net photosynthetic rate, stomatal conductance, relative leaf water content (RLWC), seed filling duration, seed growth rate, and yield per hectare. The B+Fe treatment increased seed yield by 35-38% in late-sown lentils (December). In addition, the micronutrient treatments positively impacted physiological responses under heat and moisture stress with B+Fe and B+Fe+Zn alleviating heat and moisture stress-induced perturbations. Moreover, the exogenous nutrients helped in improving physiochemical attributes, such as chlorophyll content, net photosynthetic rate, stomatal conductance, water potential, seed filling duration, and seed growth rate.
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The Potential Impact of Climate Change on the Micronutrient-Rich Food Supply. Adv Nutr 2021; 13:80-100. [PMID: 34607354 PMCID: PMC8803495 DOI: 10.1093/advances/nmab104] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2021] [Revised: 07/27/2021] [Accepted: 08/25/2021] [Indexed: 11/13/2022] Open
Abstract
Micronutrient deficiencies are a major cause of morbidity and mortality in low- and middle-income countries worldwide. Climate change, characterized by increasing global surface temperatures and alterations in rainfall, has the capacity to affect the quality and accessibility of micronutrient-rich foods. The goals of this review are to summarize the potential effects of climate change and its consequences on agricultural yield and micronutrient quality, primarily zinc, iron, and vitamin A, of plant foods and upon the availability of animal foods, to discuss the implications for micronutrient deficiencies in the future, and to present possible mitigation and adaptive strategies. In general, the combination of increasing atmospheric carbon dioxide and rising temperature is predicted to reduce the overall yield of major staple crops, fruits, vegetables, and nuts, more than altering their micronutrient content. Crop yield is also reduced by elevated ground-level ozone and increased extreme weather events. Pollinator loss is expected to reduce the yield of many pollinator-dependent crops such as fruits, vegetables, and nuts. Sea-level rise resulting from melting of ice sheets and glaciers is predicted to result in coastal inundation, salt intrusion, and loss of coral reefs and mangrove forests, with an adverse impact upon coastal rice production and coastal fisheries. Global ocean fisheries catch is predicted to decline because of ocean warming and declining oxygen. Freshwater warming is also expected to alter ecosystems and reduce inland fisheries catch. In addition to limiting greenhouse gas production, adaptive strategies include postharvest fortification of foods; micronutrient supplementation; biofortification of staple crops with zinc and iron; plant breeding or genetic approaches to increase zinc, iron, and provitamin A carotenoid content of plant foods; and developing staple crops that are tolerant of abiotic stressors such as elevated carbon dioxide, elevated temperature, and increased soil salinity.
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Does Elevated [CO 2] Only Increase Root Growth in the Topsoil? A FACE Study with Lentil in a Semi-Arid Environment. PLANTS 2021; 10:plants10040612. [PMID: 33804836 PMCID: PMC8063810 DOI: 10.3390/plants10040612] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/06/2021] [Revised: 03/18/2021] [Accepted: 03/22/2021] [Indexed: 11/16/2022]
Abstract
Atmospheric carbon dioxide concentrations [CO2] are increasing steadily. Some reports have shown that root growth in grain crops is mostly stimulated in the topsoil rather than evenly throughout the soil profile by e[CO2], which is not optimal for crops grown in semi-arid environments with strong reliance on stored water. An experiment was conducted during the 2014 and 2015 growing seasons with two lentil (Lens culinaris) genotypes grown under Free Air CO2 Enrichment (FACE) in which root growth was observed non-destructively with mini-rhizotrons approximately every 2-3 weeks. Root growth was not always statistically increased by e[CO2] and not consistently between depths and genotypes. In 2014, root growth in the top 15 cm of the soil profile (topsoil) was indeed increased by e[CO2], but increases at lower depths (30-45 cm) later in the season were greater than in the topsoil. In 2015, e[CO2] only increased root length in the topsoil for one genotype, potentially reflecting the lack of plant available soil water between 30-60 cm until recharged by irrigation during grain filling. Our limited data to compare responses to e[CO2] showed that root length increases in the topsoil were correlated with a lower yield response to e[CO2]. The increase in yield response was rather correlated with increases in root growth below 30 cm depth.
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The Response of Lentil ( Lens culinaris Medik.) to Soil Moisture and Heat Stress Under Different Dates of Sowing and Foliar Application of Micronutrients. FRONTIERS IN PLANT SCIENCE 2021; 12:679469. [PMID: 34367204 PMCID: PMC8342000 DOI: 10.3389/fpls.2021.679469] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/19/2021] [Accepted: 06/23/2021] [Indexed: 05/14/2023]
Abstract
Soil moisture and air temperature stress are the two major abiotic factors limiting lentil (Lens culinaris Medik.) growth and productivity in the humid tropics. Field experiments were conducted during winter seasons (November to March) of 2018-2019 and 2019-2020 on clay loam soil (AericHaplaquept) of Eastern India to cultivate rainfed lentil, with residual moisture. The objective was to study the effect of different time of sowing and foliar spray of micronutrients in ameliorating the effect of heat and moisture stress lentil crop experience in its reproductive stage. The study was conducted with two different dates of sowing, November and December, as main plot treatment and micronutrients foliar spray of boron, iron, and zinc either alone or in combination as subplot treatment. No foliar spray treatment was considered as a control. The soil moisture content is depleted from 38 to 18% (sowing to harvest) during November sowing; however, in December sowing, the depletion is from 30 to 15%. The foliar spray of micronutrients helped to have a better canopy cover and thus reduced soil evaporation during the later stages of crop growth when the temperature was beyond the threshold temperature of the crop. Crop growth rate (CGR) and biomass were significantly higher (p ≤ 0.05) for November sown crop and with foliar spray of boron and iron (FSB + FE) micronutrients. In the later stages of the crop when the soil moisture started depleting with no precipitation, the canopy temperature increased compared with air temperature, leading to positive values of Stress Degree Days (SDD) index. Delay in sowing reduced the duration by 11.4 days (113.5 vs. 102.1 days), resulting in varied accumulated Growing Degree Days (GDD). FSB + FE resulted in the highest yield in both years (1,436 and 1,439 kg ha-1). The results of the study concluded that the optimum time of sowing and foliar spray of micronutrients may be helpful to alleviate the soil moisture and heat stress for the sustainability of lentil production in the subtropical region.
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30 years of free-air carbon dioxide enrichment (FACE): What have we learned about future crop productivity and its potential for adaptation? GLOBAL CHANGE BIOLOGY 2021; 27:27-49. [PMID: 33135850 DOI: 10.1111/gcb.15375] [Citation(s) in RCA: 115] [Impact Index Per Article: 38.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/04/2020] [Revised: 09/17/2020] [Accepted: 09/22/2020] [Indexed: 05/03/2023]
Abstract
Free-air CO2 enrichment (FACE) allows open-air elevation of [CO2 ] without altering the microclimate. Its scale uniquely supports simultaneous study from physiology and yield to soil processes and disease. In 2005 we summarized results of then 28 published observations by meta-analysis. Subsequent studies have combined FACE with temperature, drought, ozone, and nitrogen treatments. Here, we summarize the results of now almost 250 observations, spanning 14 sites and five continents. Across 186 independent studies of 18 C3 crops, elevation of [CO2 ] by ca. 200 ppm caused a ca. 18% increase in yield under non-stress conditions. Legumes and root crops showed a greater increase and cereals less. Nitrogen deficiency reduced the average increase to 10%, as did warming by ca. 2°C. Two conclusions of the 2005 analysis were that C4 crops would not be more productive in elevated [CO2 ], except under drought, and that yield responses of C3 crops were diminished by nitrogen deficiency and wet conditions. Both stand the test of time. Further studies of maize and sorghum showed no yield increase, except in drought, while soybean productivity was negatively affected by early growing season wet conditions. Subsequent study showed reduced levels of nutrients, notably Zn and Fe in most crops, and lower nitrogen and protein in the seeds of non-leguminous crops. Testing across crop germplasm revealed sufficient variation to maintain nutrient content under rising [CO2 ]. A strong correlation of yield response under elevated [CO2 ] to genetic yield potential in both rice and soybean was observed. Rice cultivars with the highest yield potential showed a 35% yield increase in elevated [CO2 ] compared to an average of 14%. Future FACE experiments have the potential to develop cultivars and management strategies for co-promoting sustainability and productivity under future elevated [CO2 ].
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Heat and Drought Stress Impact on Phenology, Grain Yield, and Nutritional Quality of Lentil ( Lens culinaris Medikus). Front Nutr 2020; 7:596307. [PMID: 33330596 PMCID: PMC7719779 DOI: 10.3389/fnut.2020.596307] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2020] [Accepted: 10/28/2020] [Indexed: 12/20/2022] Open
Abstract
Lentil (Lens culinaris Medikus) is a protein-rich cool-season food legume with an excellent source of protein, prebiotic carbohydrates, minerals, and vitamins. With climate change, heat, and drought stresses have become more frequent and intense in lentil growing areas with a strong influence on phenology, grain yield, and nutritional quality. This study aimed to assess the impact of heat and drought stresses on phenology, grain yield, and nutritional quality of lentil. For this purpose, 100 lentil genotypes from the global collection were evaluated under normal, heat, and combined heat-drought conditions. Analysis of variance revealed significant differences (p < 0.001) among lentil genotypes for phenological traits, yield components, and grain quality traits. Under no stress conditions, mineral concentrations among lentil genotypes varied from 48 to 109 mg kg−1 for iron (Fe) and from 31 to 65 mg kg−1 for zinc (Zn), while crude protein content ranged from 22.5 to 32.0%. Iron, zinc, and crude protein content were significantly reduced under stress conditions, and the effect of combined heat-drought stress was more severe than heat stress alone. A significant positive correlation was observed between iron and zinc concentrations under both no stress and stress conditions. Based on grain yield, crude protein, and iron and zinc concentrations, lentil genotypes were grouped into three clusters following the hierarchical cluster analysis. Promising lentil genotypes with high micronutrient contents, crude protein, and grain yield with the least effect of heat and drought stress were identified as the potential donors for biofortification in the lentil breeding program.
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Potential effects of a high CO 2 future on leguminous species. PLANT-ENVIRONMENT INTERACTIONS (HOBOKEN, N.J.) 2020; 1:67-94. [PMID: 37283729 PMCID: PMC10168062 DOI: 10.1002/pei3.10009] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/31/2019] [Revised: 01/07/2020] [Accepted: 01/13/2020] [Indexed: 06/08/2023]
Abstract
Legumes provide an important source of food and feed due to their high protein levels and many health benefits, and also impart environmental and agronomic advantages as a consequence of their ability to fix nitrogen through their symbiotic relationship with rhizobia. As a result of our growing population, the demand for products derived from legumes will likely expand considerably in coming years. Since there is little scope for increasing production area, improving the productivity of such crops in the face of climate change will be essential. While a growing number of studies have assessed the effects of climate change on legume yield, there is a paucity of information regarding the direct impact of elevated CO2 concentration (e[CO2]) itself, which is a main driver of climate change and has a substantial physiological effect on plants. In this review, we discuss current knowledge regarding the influence of e[CO2] on the photosynthetic process, as well as biomass production, seed yield, quality, and stress tolerance in legumes, and examine how these responses differ from those observed in non-nodulating plants. Although these relationships are proving to be extremely complex, mounting evidence suggests that under limiting conditions, overall declines in many of these parameters could ensue. While further research will be required to unravel precise mechanisms underlying e[CO2] responses of legumes, it is clear that integrating such knowledge into legume breeding programs will be indispensable for achieving yield gains by harnessing the potential positive effects, and minimizing the detrimental impacts, of CO2 in the future.
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Effect of heat wave on N 2 fixation and N remobilisation of lentil (Lens culinaris MEDIK) grown under free air CO 2 enrichment in a mediterranean-type environment. PLANT BIOLOGY (STUTTGART, GERMANY) 2020; 22 Suppl 1:123-132. [PMID: 31532043 DOI: 10.1111/plb.13047] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/13/2019] [Accepted: 09/06/2019] [Indexed: 05/14/2023]
Abstract
The stimulatory effect of elevated [CO2 ] (e[CO2 ]) on crop production in future climates is likely to be cancelled out by predicted increases in average temperatures. This effect may become stronger through more frequent and severe heat waves, which are predicted to increase in most climate change scenarios. Whilst the growth and yield response of some legumes grown under the interactive effect of e[CO2 ] and heat waves has been studied, little is known about how N2 fixation and overall N metabolism is affected by this combination. To address these knowledge gaps, two lentil genotypes were grown under ambient [CO2 ] (a[CO2 ], ~400 µmol·mol-1 ) and e[CO2 ] (~550 µmol·mol-1 ) in the Australian Grains Free Air CO2 Enrichment facility and exposed to a simulated heat wave (3-day periods of high temperatures ~40 °C) at flat pod stage. Nodulation and concentrations of water-soluble carbohydrates (WSC), total free amino acids, N and N2 fixation were assessed following the imposition of the heat wave until crop maturity. Elevated [CO2 ] stimulated N2 fixation so that total N2 fixation in e[CO2 ]-grown plants was always higher than in a[CO2 ], non-stressed control plants. Heat wave triggered a significant decrease in active nodules and WSC concentrations, but e[CO2 ] had the opposite effect. Leaf N remobilization and grain N improved under interaction of e[CO2 ] and heat wave. These results suggested that larger WSC pools and nodulation under e[CO2 ] can support post-heat wave recovery of N2 fixation. Elevated [CO2 ]-induced accelerated leaf N remobilisation might contribute to restore grain N concentration following a heat wave.
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Impact of heat stress during seed filling on seed quality and seed yield in lentil (Lens culinaris Medikus) genotypes. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2018; 98:5134-5141. [PMID: 29635707 DOI: 10.1002/jsfa.9054] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2017] [Revised: 03/31/2018] [Accepted: 03/31/2018] [Indexed: 05/20/2023]
Abstract
BACKGROUND Lentil, a cool-season food legume, is highly sensitive to high temperatures, which drastically reduce biomass and seed yield. The effects of heat stress on qualitative and quantitative aspects of seeds are not yet known. RESULTS In this study, we assessed the effects of high temperatures on quantitative and qualitative aspects of seeds in a heat-tolerant (HT; FLIP2009) and heat-sensitive (HS; IG4242) genotypes in a controlled environment. Initially, the plants were raised in a natural, outdoor environment (22/10 °C mean day/night temperature, 1350 µmol m-2 s-1 light intensity, 60-65% relative humidity) from November to mid-February until 50% flowering (114-115 days after sowing). After that, one set of plants was maintained in a controlled environment (28/23 °C, as mean day and night temperature, 500 µmol m-2 s-1 light intensity, 60-65% relative humidity;control) and one set was exposed to heat stress (33/28 °C, as mean day and night temperature, 500 µmol m-2 s-1 light intensity, 60-65% relative humidity), where they remained until maturity. Compared to control, heat stress reduced the seed growth rate by 30-44% and the seed-filling duration by 5.5-8.1 days, which ultimately reduced the seed yield by 38-58% and individual seed weights by 20-39%. Heat stress significantly damaged cell membranes and reduced chlorophyll concentration and fluorescence, and the photosynthetic rate, which was associated with a significant reduction in relative leaf water content. The proximate analysis of seed reserves showed that heat stress reduced starch (25-43%), protein (26-41%) and fat (39-57%) content, and increased total sugars (36-68%), relative to the controls. Heat stress also inhibited the accumulation of storage proteins including albumins, globulins, prolamins and glutelins (22-42%). Most of the amino acids decreased significantly under heat stress in comparison to control, whereas some, such as proline, followed by glycine, alanine, isoleucine, leucine and lysine, increased. Heat stress reduced Ca (13-28%), Fe (17-52%), P (10-54%), K (12.4-28.3%) and Zn (36-59%) content in seeds, compared to the controls. CONCLUSIONS High temperatures during seed filling are detrimental for seed yield and quality components in lentil genotypes, with severe impacts on heat-sensitive genotypes. © 2018 Society of Chemical Industry.
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