Identifying Roadkill Hotspots for Mammals in the Brazilian Atlantic Forest using a Functional Group Approach

A critical step to design wildlife mitigating measures is the identification of roadkill hotspots. However, the effectiveness of mitigations based on roadkill hotspots depends on whether spatial aggregations are recurrent over time, spatially restricted, and most importantly, shared by species with diverse ecological and functional characteristics. We used a functional group approach to map roadkill hotspots for mammalian species along the BR-101/North RJ, a major road crossing important remnants of the Brazilian Atlantic Forest. We tested if functional groups present distinct hotspot patterns, and if they converge into the same road sectors, in that case, favoring optimal mitigating actions. Roadkill rates were monitored and recorded between October/2014 and September/2018 and species were classified into six functional groups based on their home range, body size, locomotion mode, diet, and forest-dependency. Hotspots along the roads were mapped for comparison of spatial patterns between functional groups. Results demonstrated that the roadkill index varied idiosyncratically for each functional group throughout the months and that no group presented seasonality. Seven hotspots were shared by two or more functional groups, highlighting the importance of these road stretches to regional mammal fauna. Two of the stretches are associated with aquatic areas extending from one side of the road to the other, and the remaining are connected to patches of native vegetation on both sides. This work brings a promising approach, yet hardly used in ecological studies on roads to analyze roadkill dynamics, assigning more importance to ecological instead of taxonomical characteristics, normally used to identify spatiotemporal patterns.

Human disturbances and the daytime activity of sympatric otters along equatorial Amazonian rivers

Background

Previous studies suggest coexistence between sympatric neotropical (Lontra longicaudis) and giant otters (Pteronura brasiliensis) maybe facilitated by temporal and spatial differences in activity. Yet, to date there has been no systematic evaluation of activity of these species in sympatry. Here we use extensive multi-year field data to compare temporal and spatial patterns in the diurnal activity of sympatric giant and neotropical otters to answer three questions: Do temporal patterns in daytime river use change in relation to seasonal river levels (low, rising, high and declining river levels), do they change due to human disturbances (boats and fishing nets) and do patterns in neotropical otter activity change due to the presence of the larger sized giant otter?

Methods

Direct observations of both species were recorded using standardized boat surveys along 218 km of rivers over 53 months during nine years (2011-2013 and 2015-2020). Complementary techniques (Generalized Additive Models, Kernel density estimates and non-parametric tests,) were used to compare diurnal activity patterns along rivers subdivided into 41 river reaches.

Results

The presence of giant otters decreased threefold from 67% of the least disturbed reaches (few boats no fishing nets) to 18% of the most disturbed reaches with many boats and fishing nets. In contrast neotropical otter presence nearly doubled from 44% of the least disturbed to 73% of the most disturbed reaches with fewest giant otter detections. Both species were observed across all daytime hours but were observed rarely on the same day. There was no evidence to suggest simultaneous use of the same reach. When species were detected on the same day, they were separated spatially (median distance between species 12.5 km) and temporally (median time difference 3.0 hours). There was little change in activity of either species among seasons. Giant otters were less active in river reaches with fishing nets and boat use, whereas neotropical otter activity did not appear to be strongly affected by these activities.

Conclusions

Our findings support evidence that diurnal activity in both otter species is flexible, with daytime activity changing due to human disturbances in the case of giant otters.

Airborne vocal communication in adult neotropical otters (Lontra longicaudis)

Most aquatic mammals have complex social and communication systems. Interestingly, little is known about otters' vocal communication compared to other aquatic mammals. Here, for the first time, we acoustically describe vocalizations of the neotropical otter (Lontra longicaudis), a solitary and endangered New World otter species. We recorded vocalizations and behavioral contexts from six captive neotropical otters at Projeto Lontra, Santa Catarina Island, Brazil. Analysis of acoustic parameters were used to classify the vocalizations according to structure and context. We describe six call types with highly tonal as well as chaotic vocalizations with fundamental frequencies ranging from 90 to 2500 Hz. Additionally, we identified sex differences in the usage of calls. Results suggest that the neotropical river otter has a rich vocal repertoire, similar in complexity to other solitary otter species, but less complex than that of the social giant otter. Despite differences in sociality, phylogeny and ecology, L. longicaudis seems to possess vocalizations homologous to those found in other otters (e.g. hah and chirp), suggesting phylogenetic inertia in otter communicative repertoire. Otters thus offer an interesting but neglected group to explore the evolution of communication systems.

Social organization of otters in relation to their ecology

Otter species are known to fluctuate intraspecifically from a solitary lifestyle to group-living arrangements. By examining what is known about habitat use and foraging style in otters of 13 different species, based on 93 studied sites, we assessed (1) the relationship between social habits and preferred habitats, (2) the relationship between species and prey preferences, and (3) the effect of predator avoidance on their social organization in order to assess the socio-ecological factors influencing otters. Females remain the core of their social stability. We show the major influence of habitats and feeding strategies (i.e. socio-ecology) of otters. The different species of solitary otters most often inhabit linear environments, such as freshwater ecosystems or wave-exposed marine coasts, and their habitat is often subject to disturbances that fragment their functional continuity. Social otters are more often found in extensive habitats with high plant cover, regular food resources and in areas with large predators compared to solitary species. The maintenance of regular resources and the fact that the main trophic resources are replenished rapidly might be determining factors driving sociality. Group-living and bachelor congregations among otters can also respond to pressure from large predators. This suggests that foraging, habitat use and the presence of large predators may be the drivers of sociality in otters. We conclude that most otters have a greater social potential than previously assumed, which is confirmed by their various vocalizations recently described.

Impacto de um desastre natural sobre o habitat e a ocorrência de Lontra longicaudis (Mustelidae, Carnivora) na Serra da Prata, Paraná, Brasil

RESUMO Estudos com impacto de desastres naturais sobre a fauna são raros na literatura científica. Considerando Lontra longicaudis (Olfers, 1818), informações publicadas não foram encontradas. O presente estudo buscou determinar se os deslizamentos de terra ocorridos em março de 2011 em parte das montanhas da Serra da Prata (Paraná, Brasil) afetaram de alguma forma a ocorrência da Lontra Neotropical no local impactado. Com esse propósito, a área estudada compreendeu um rio afetado (Rio Santa Cruz - RSC) da face leste dessa serra que foi comparado com outro não afetado (Rio das Pombas - RP), localizado na mesma face da serra e com características semelhantes às originais do RSC. A área de estudo está situada no Parque Nacional de Saint-Hilaire/Lange (PNSHL). Foram realizadas sete campanhas a partir do limite altitudinal do PNSHL (60 m s.n.m) para montante entre agosto de 2012 e julho de 2013. As campanhas consistiram de busca ativa por vestígios (fezes, pegadas, arranhados) e tocas de lontras ao longo de 3 km de margens e leito. Registros de outros mamíferos também foram observados. Cada evidência foi anotada em caderneta de campo, fotografada e georreferenciada. As tocas foram monitoradas ao longo das campanhas. Considerando as lontras, foram registrados 102 vestígios (11 arranhados, 11 pegadas e 80 fezes) e 17 tocas no rio não afetado (RP); e o rio afetado (RSC) apresentou apenas quatro vestígios (três pegadas, uma amostra fecal) e uma toca. Registros de outros mamíferos denotaram a presença de oito táxons no RP e 14 táxons no RSC. As diferenças conspícuas entre a quantidade de vestígios da presença das lontras indicam que o desastre natural afetou a população de lontras do RSC e mesmo dois anos após o evento as lontras retornaram apenas discretamente ao rio afetado. Por outro lado, outras espécies de mamíferos como Cuniculus paca (Linnaeus, 1758), reocuparam as margens abundantemente.

Escherichia coli is not a suitable fecal indicator to assess water fecal contamination by otters

The detection of pathogenic microorganisms in aquatic environments is extremely relevant in terms of public health. As these laboratorial methodologies are usually difficult, expensive and time-consuming, they are frequently replaced by the assessment of fecal indicator bacteria, such as Escherichia coli. This study aimed to assess the presence of E. coli in fecal samples from Neotropical otters, to evaluate its potential as fecal indicator to be applied to the determination of water microbiological quality in areas where otters' populations are high. Twenty-six otter fecal samples, collected in Alto Paranapanema river basin, São Paulo State, Brazil, were analyzed for the presence of E. coli, using conventional bacteriological methods. Only 8 scat samples (30%) were E. coli positive, indicating that this microorganism is not a suitable fecal indicator to assess water fecal contamination by Neotropical otters, and should not be used to infer the presence of otter related pathogens in waters.

Uso do espaço por Lontra longicaudis (Mustelidae, Carnivora) em ambiente alterado no rio Caí, Rio Grande do Sul, Brasil

A utilização de abrigos e do espaço pela lontra neotropical (Lontra longicaudis) (Olfers, 1818), foi estudada em um ambiente alterado e com presença humana no rio Caí, Triunfo, RS. A maioria dos sítios de marcação teve uso ocasional, e uma pequena percentagem teve uso frequente e intenso. A maioria das marcações de cheiro se encontrava no solo a uma média de distância de 1,65m da linha d'água. Ao todo foram encontrados sete abrigos na área de estudo, sendo que a lontra demonstrou preferência por abrigos específicos. O abrigo mais utilizado se constituía em escavações na barranca do rio sob as raízes de uma árvore, sendo este o de maiores dimensões e o único com galerias sob o solo. Os demais abrigos se encontravam no nível do solo e consistiam em emaranhados de galhos sob a vegetação, ou de raízes e/ou troncos caídos. O uso do espaço pela lontra esteve correlacionado à localização de suas tocas, ao grau de cobertura vegetal do local e parece ter sido pouco influenciado pelo distúrbio humano. Para medidas de conservação da lontra neotropical ressalta-se a importância da manutenção da mata ciliar e a proteção das áreas com a presença de abrigos.

Use of shelters and marking sites by Lontra longicaudis (Olfers, 1818) in lotic and semilotic environments

The Neotropical otter Lontra longicaudis (Olfers, 1818) (Carnivora: Mustelidae) is a semi-aquatic species spread throughout Central and South America, except Chile. It uses cavities on the river banks or spaces amidst dense vegetation as shelter and defecates in conspicuous places as a means of territorial marking. The study was conducted between April 2008 and March 2009, aiming to compare and correlate the frequency of shelter use and marking by the otters, considering vertical vegetation cover, height, distance, disturbance degree and type of structure/substrate factors, in a lotic environment (Sapé stream, São Paulo state, Brazil) and a semi-lotic environment (Canoas I hydroelectric reservoir, Paranapanema Valley, São Paulo and Paraná states, also in Brazil). The aim was to compare and correlate the frequency of shelter use and marking by the otters, considering factors like vertical vegetation cover, height, distance, degree of disturbance and type of structure/substrate in two areas. It was evidenced that the otter's shelters show visual protection differences in each environment. Around the reservoir, the otters make greater use of areas with higher degrees of disturbance and are selective about the type of shelter structure. Along the stream, the otters favor areas with greater vegetation cover to demarcate. Our results warrant emphasis that other abiotic, biotic or density dependent factors (population number and intra or interspecific competition, for example) may be responsible for the otters' different choice of sites used for shelters and markings in the two environments but they were not identified in this study. Moreover, the different number of samples obtained in each location may have harmed the statistical analyses. However, based on the results, we were able to conclude that the species is able to adapt to the altered environment of the reservoir, using shelters and depositing markings according to the imposed environmental conditions and, whenever possible, it takes advantage of the facilitated food capture offered by environment. Nevertheless, the otters still present some dependence on areas with preserved vegetation, where they find sites with better shelter and marking conditions.

Trophic ecology and the use of shelters and latrines by the Neotropical otter (Lontra longicaudis) in the Taquari Valley, Southern Brazil

This manuscript presents information about the ecology of Lontra longicaudis (Olfers, 1818) in the Taquari Valley, State of Rio Grande do Sul, southern Brazil. The study was carried out in two areas located in the Forquetinha Creek and in the Forqueta River from January to December 2003. The otters are specialist feeders (Bsta = 0.24), with a diet based mostly on fish, especially those of the families Loricariidae and Cichlidae. Most shelters used by the species were excavated burrows underneath tree roots, while shelters within rocks were used less frequently. The burrows showed great variation in size, being found on average 3.5 m (sd = 3.6 m) away from the margin and 2.5 m (sd = 1.2 m) above the water level. Scent marks were made preferentially on rocks and fallen tree trunks at the edge of the water. There was a tendency to increase the reutilization of latrines in detriment of using new sites throughout the sample period.

Genetic diversity of the Neotropical otter (Lontra longicaudis Olfers, 1818) in Southern and Southeastern Brazil

The Neotropical otter is one of the least known otter species, and it is considered to be threatened to various degrees throughout its geographic range. Little information exists on the ecological characteristics of this species, and no genetic study has been published about it until now, hampering the design of adequate conservation strategies for its populations. To contribute with genetic information to comprehensive conservation efforts on behalf of L. longicaudis, we characterized the molecular diversity of the 5 portion of the mtDNA control region in samples from this species collected in Southern and Southeastern Brazil. The sequence analysis revealed a high level of haplotype diversity (h=0.819; SE=0.0052) and nucleotide variability ranging from 0.0039 to 0.0067. One of the sampled haplotypes was the most common in both regions and, from this sequence, several other (locally occurring) haplotypes could be derived by single point mutations. No significant genetic differentiation was observed between the Southern and Southeastern regions.

Shelter availability and use by mammals and birds in an Atlantic forest area

This paper describes the types of ground-level shelters, their availability and use by mammals and birds at Parque Estadual Carlos Botelho (PECB), an Atlantic forest area at southeastern Brazil. Eight types of shelters were found: shelters without tunnels under living trees, shelters with tunnels under living trees, shelters under mounds formed by adventitious roots, shelters under fallen trees, burrows not supported by trees or roots, riverbank shelters, stream tunnels and rock shelters. Mammal species that used shelters more frequently were Agouti paca, Philander frenata, Lontra longicaudis, Metachirus nudicaudatus and Trinomys iheringi. Utilization of shelter types and shelter topographic locations by these six species was roughly similar to the proportions in which shelters of different types and locations were monitored, with the exception of otters, which are semi-aquatic mammals and used mainly riverbank shelters. Contrary to expectations, animals did not choose shelters with entrances fitted to their sizes. Shelters were used either by a single species or by different species. I hypothesize that at the PECB other factors such as microclimate inside shelters must be more important in determining shelter use than shelter external characteristics or topographic location. Some species, as coatis Nasua nasua and probably small didelphids and birds, enter shelters to search for invertebrates and small vertebrates.