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Fang Z, Wang Y, Xu L, Lin Y, Zhang B, Chen J. Investigation of the Significance of Blood Signatures on Sepsis-Induced Acute Lung Injury in Sepsis Within 24 Hours. Int J Genomics 2025; 2025:5684300. [PMID: 40421173 PMCID: PMC12105892 DOI: 10.1155/ijog/5684300] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2024] [Accepted: 04/17/2025] [Indexed: 05/28/2025] Open
Abstract
Background: Sepsis is an infection-induced dysregulated cellular response that leads to multiorgan dysfunction. As a time-sensitive condition, sepsis requires prompt diagnosis and standardized treatment. This study investigated the impact of biomarkers identified in peripheral whole blood from sepsis patients (24-h post-onset) on sepsis-induced acute lung injury (ALI) using bioinformatics and machine learning approaches. Methods: Gene Expression Omnibus (GEO) datasets were analyzed for functional and differential gene expression. Critical genetic markers were identified and evaluated using multiple machine learning algorithms. Single-cell RNA sequencing (scRNA-seq) and cell-type identification by estimating relative subsets of RNA transcript (CIBERSORT) were conducted to explore associations between biomarkers and immune cells. Biomarker expression was further validated through animal experiments. Result: A total of 611 overlapping differentially expressed genes (DEGs) were identified in GSE54514, including 361 upregulated and 250 downregulated genes. From GSE95233, 1150 DEGs were detected, with 703 upregulated and 447 downregulated genes. Enrichment analysis revealed DEGs associated with immune cell activity, immune cell activation, and inflammatory signaling pathways. Component 3a receptor 1 (C3AR1) and secretory leukocyte peptidase inhibitor (SLPI) were identified as critical biomarkers through multiple machine learning approaches. CIBERSORT analysis revealed significant associations between immune cell types and C3AR1/SLPI. Moreover, the scRNA-seq analysis demonstrated that the SLPI expression was significantly elevated in immunological organ cells during the early stages of sepsis, a finding further validated in sepsis-induced ALI models. Conclusion: This study employed machine learning techniques to identify sepsis-associated genes and confirmed the importance of SLPI as a biomarker within 24 h of sepsis onset. SLPI also played a significant role in sepsis-induced ALI, suggesting its potential as a novel target for personalized medical interventions, targeted prevention, and patient screening.
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Affiliation(s)
- Zaojun Fang
- Suzhou TCM Hospital Affiliated to Nanjing University of Chinese Medicine, Suzhou, Jiangsu, China
| | - Yuanyuan Wang
- Suzhou Research Center of Medical School, Suzhou Hospital, Affiliated Hospital of Medical School, Nanjing University, Suzhou, Jiangsu, China
| | - Lingqi Xu
- Department of Emergency, Suzhou Hospital of Integrated Traditional Chinese and Western Medicine, Suzhou, Jiangsu, China
| | - Ying Lin
- Department of Emergency, Suzhou Hospital of Integrated Traditional Chinese and Western Medicine, Suzhou, Jiangsu, China
| | - Biao Zhang
- Department of Emergency, Suzhou Hospital of Integrated Traditional Chinese and Western Medicine, Suzhou, Jiangsu, China
| | - Jiaping Chen
- Department of Emergency, Suzhou Hospital of Integrated Traditional Chinese and Western Medicine, Suzhou, Jiangsu, China
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Lange A, Cajander S, Magnuson A, Sundén-Cullberg J, Strålin K, Hultgren O. Plasma concentrations of secretory leukocyte protease inhibitor (SLPI) differ depending on etiology and severity in community-onset bloodstream infection. Eur J Clin Microbiol Infect Dis 2019; 38:1425-1434. [PMID: 31089838 PMCID: PMC6647850 DOI: 10.1007/s10096-019-03567-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2019] [Accepted: 04/17/2019] [Indexed: 11/24/2022]
Abstract
The severity of bloodstream infections (BSI) depends on pathogen, source, and host factors. Secretory leukocyte protease inhibitor (SLPI) counteracts tissue damage, balances inflammation, and is increased in pneumonia and sepsis. We aimed to evaluate whether SLPI production differs depending on etiology, disease severity, and sex in BSI and to correlate SLPI with markers of inflammation and immunosuppression. Of the adult patients with BSI, 109 were included and sampled repeatedly, from hospital admission through day 28. Controls (blood donors) were sampled twice. SLPI in plasma was measured with enzyme-linked immunosorbent assay (ELISA) technique. Streptococcus pneumoniae and Staphylococcus aureus etiology were associated with higher SLPI than Escherichia coli on days 1–2 and 3. On day 1–2, subjects with sepsis had higher SLPI concentrations than those with non-septic BSI. Pneumonia was associated with higher SLPI than a non-pulmonary source of infection. SLPI co-varied with inflammatory markers. SLPI concentrations did not differ with regard to sex in the full cohort, but men with pneumonia had higher SLPI than women on day 1–2. S. pneumoniae and S. aureus BSI were associated with higher SLPI, when compared to E. coli. Severity and pneumonia, as well as male sex in the pneumonia sub-cohort, were factors independently associated with higher SLPI.
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Affiliation(s)
- Anna Lange
- Department of Infectious Diseases, Faculty of Medicine and Health, Örebro University, SE-70182, Örebro, Sweden.
| | - Sara Cajander
- Department of Infectious Diseases, Faculty of Medicine and Health, Örebro University, SE-70182, Örebro, Sweden
| | - Anders Magnuson
- Clinical Epidemiology and Biostatistics, School of Medical Sciences, Örebro University, SE-70182, Örebro, Sweden
| | - Jonas Sundén-Cullberg
- Department of Infectious Diseases, Karolinska University Hospital, Stockholm, Sweden
- Department of Medicine Huddinge, Karolinska Institutet, Stockholm, Sweden
| | - Kristoffer Strålin
- Department of Infectious Diseases, Karolinska University Hospital, Stockholm, Sweden
- Department of Medicine Huddinge, Karolinska Institutet, Stockholm, Sweden
| | - Olof Hultgren
- Department of Infectious Diseases, Karolinska University Hospital, Stockholm, Sweden
- Department of Clinical Immunology and Transfusion Medicine, Faculty of Medicine and Health, Örebro University, SE-70182, Örebro, Sweden
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Liu M, Li H, Xue CX, Gu L, Qu JX, Yu XM, Wang YM, Liu YM, Cao B. Differences in inflammatory marker patterns for adult community-acquired pneumonia patients induced by different pathogens. CLINICAL RESPIRATORY JOURNAL 2017; 12:974-985. [PMID: 28139879 DOI: 10.1111/crj.12614] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2016] [Accepted: 01/17/2017] [Indexed: 12/01/2022]
Abstract
INTRODUCTION The inflammatory marker patterns of community-acquired Pneumonia (CAP) induced by different microorganisms in adult patients remained unclear. OBJECTIVES We aim to explore the inflammatory marker patterns of adult CAP patients induced by different pathogens. METHODS Adult CAP patients with definite etiologies were enrolled from September 2010 to June 2012. They were divided into three groups according to the causative pathogens: typical bacteria, Mycoplasma pneumoniae (MP), and viruses. Twenty-seven cytokines and bactericidal/permeability-increasing protein (BPI) levels of serum collected within 7 days onset in these groups were compared. RESULTS One hundred twenty-four cases were enrolled for serum detection and analysis, including 10 typical bacterial pneumonia patients, 56 cases with MP pneumonia and 58 with viral pneumonia. Three kinds (PDGF-BB, IP-10, RANTES) of 27 cytokines and BPI levels were significantly elevated in patients with acute pneumonia than healthy controls. Distinct inflammatory marker patterns were released by different pathogens: typical bacterial pneumonia patients had highest levels of BPI, IL-6, IL-8, IL-1rα; while patients caused by MP presented higher levels of PDGF-BB, IL-17A, G-CSF than those caused by viruses. Rhinovirus owned a higher inflammatory response level than the other viruses. The area under the curve (AUC) of PDGF-BB to differentiate MP and virus infection was biggest, which was 0.708. CONCLUSION Distinct inflammatory marker patterns were released by different pathogens during acute pneumonia. Significantly increased level of PDGF-BB was observed in acute pneumonia for the first time. It showed a better ability to differentiate MP and virus infection.
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Affiliation(s)
- Meng Liu
- Department of Infectious diseases and Clinical Microbiology, Beijing Chao-Yang Hospital, Beijing Institute of Respiratory Medicine, Beijing, 100020, China.,Beijing Hospital of Traditional Chinese Medicine affiliated to Capital Medical University, Beijing, 100010, China
| | - Hui Li
- Department of Respiratory Medicine, Capital Medical University, Beijing, 100069, China
| | - Chun Xue Xue
- Department of Respiratory Medicine, Capital Medical University, Beijing, 100069, China
| | - Li Gu
- Department of Infectious diseases and Clinical Microbiology, Beijing Chao-Yang Hospital, Beijing Institute of Respiratory Medicine, Beijing, 100020, China
| | - Jiu Xin Qu
- Department of Infectious diseases and Clinical Microbiology, Beijing Chao-Yang Hospital, Beijing Institute of Respiratory Medicine, Beijing, 100020, China
| | - Xiao Min Yu
- Department of Infectious diseases and Clinical Microbiology, Beijing Chao-Yang Hospital, Beijing Institute of Respiratory Medicine, Beijing, 100020, China
| | - Yi Min Wang
- National Clinical Research Centre of Respiratory Diseases, Center for Respiratory Diseases, China - Japan Friendship Hospital; Department of Pulmonary and Critical Care Medicine, China - Japan Friendship Hospital, Beijing, 100029, China
| | - Ying Mei Liu
- National Clinical Research Centre of Respiratory Diseases, Center for Respiratory Diseases, China - Japan Friendship Hospital; Department of Pulmonary and Critical Care Medicine, China - Japan Friendship Hospital, Beijing, 100029, China
| | - Bin Cao
- Department of Respiratory Medicine, Capital Medical University, Beijing, 100069, China.,National Clinical Research Centre of Respiratory Diseases, Center for Respiratory Diseases, China - Japan Friendship Hospital; Department of Pulmonary and Critical Care Medicine, China - Japan Friendship Hospital, Beijing, 100029, China
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Nair GB, Niederman MS. Year in review 2012: Critical Care--respiratory infections. CRITICAL CARE : THE OFFICIAL JOURNAL OF THE CRITICAL CARE FORUM 2013; 17:251. [PMID: 24438847 PMCID: PMC4057239 DOI: 10.1186/cc12773] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Over the last two decades, considerable progress has been made in the understanding of disease mechanisms and infection control strategies related to infections, particularly pneumonia, in critically ill patients. Patient-centered and preventative strategies assume paramount importance in this era of limited health-care resources, in which effective targeted therapy is required to achieve the best outcomes. Risk stratification using severity scores and inflammatory biomarkers is a promising strategy for identifying sick patients early during their hospital stay. The emergence of multidrug-resistant pathogens is becoming a major hurdle in intensive care units. Cooperation, education, and interaction between multiple disciplines in the intensive care unit are required to limit the spread of resistant pathogens and to improve care. In this review, we summarize findings from major publications over the last year in the field of respiratory infections in critically ill patients, putting an emphasis on a newer understanding of pathogenesis, use of biomarkers, and antibiotic stewardship and examining new treatment options and preventive strategies.
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