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Singh A, Rawat A, Kaur A, Kaur A, Kumrah R, Johnson N, Chaudhary H, Pilania RK, Srivastava P, Singh S. Association of SNP (rs1042579) in thrombomodulin gene and plasma thrombomodulin level in North Indian children with Kawasaki disease. Mol Biol Rep 2022; 49:7399-7407. [PMID: 35587845 DOI: 10.1007/s11033-022-07533-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2022] [Accepted: 04/27/2022] [Indexed: 11/25/2022]
Abstract
BACKGROUND Kawasaki disease (KD) is the commonest systemic vasculitis in children. It predisposes to development of coronary artery abnormalities (CAAs). Thrombomodulin (THBD) gene polymorphism rs1042579 is associated with high risk of cerebrovascular diseases. However, association of THBD polymorphism (rs1042579) and plasma thrombomodulin (TM) levels with susceptibility to KD and CAAs remains unclear. METHODS AND RESULTS Polymorphism in THBD gene (rs1042579) was analysed in 50 KD patients and 50 age, gender and ethnicity matched controls using Sanger sequencing. Plasma TM levels were measured by ELISA. RESULTS Mean plasma TM level (± SD) in KD patients was 2549.41 (± 853.18) pg/ml and in controls was 2298.03 (± 869.14) pg/ml; p = 0.042. Mean plasma TM levels in CC genotype was 2299.98 (± 834.88) pg/ml and in CT/TT genotype was 2837.96 (± 857.14) pg/ml; p = 0.005. Genotyping data did not reveal significant differences in patients with KD as compared to controls (p = 0.25), and in KD patients with and without CAAs (p = 0.407). Odds of finding T allele in cases were 2.07 times greater than in controls (p = 0.093). CONCLUSIONS This is the first study from India, and second in the world, that investigates association of THBD gene polymorphism with KD. This is also the first study to assess plasma TM levels in KD patients. Our data show that plasma TM levels were significantly higher in KD patients with CT/TT genotypes. Further, the polymorphism rs1042579 at exon 1 of THBD gene was found to be more common in KD patients than in controls although the difference was not statistically significant.
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Affiliation(s)
- Ankita Singh
- Allergy Immunology Unit, Post Graduate Institute of Medical Education & Research, PGIMER, Chandigarh, 160012, India
| | - Amit Rawat
- Allergy Immunology Unit, Post Graduate Institute of Medical Education & Research, PGIMER, Chandigarh, 160012, India
| | - Anit Kaur
- Allergy Immunology Unit, Post Graduate Institute of Medical Education & Research, PGIMER, Chandigarh, 160012, India
| | - Anupriya Kaur
- Genetic Metabolic Unit, Advanced Pediatrics Centre, Post Graduate Institute of Medical Education & Research, PGIMER, Chandigarh, 160012, India
| | - Rajni Kumrah
- Allergy Immunology Unit, Post Graduate Institute of Medical Education & Research, PGIMER, Chandigarh, 160012, India
| | - Nameirakpam Johnson
- Allergy Immunology Unit, Post Graduate Institute of Medical Education & Research, PGIMER, Chandigarh, 160012, India
| | - Himanshi Chaudhary
- Allergy Immunology Unit, Post Graduate Institute of Medical Education & Research, PGIMER, Chandigarh, 160012, India
| | - Rakesh Kumar Pilania
- Allergy Immunology Unit, Post Graduate Institute of Medical Education & Research, PGIMER, Chandigarh, 160012, India
| | - Priyanka Srivastava
- Genetic Metabolic Unit, Advanced Pediatrics Centre, Post Graduate Institute of Medical Education & Research, PGIMER, Chandigarh, 160012, India.
| | - Surjit Singh
- Allergy Immunology Unit, Post Graduate Institute of Medical Education & Research, PGIMER, Chandigarh, 160012, India
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Mughal MA, Soomro MS, AlSaani SMAJ, Shahid S, Ahmed S. Association of Thrombomodulin Gene Polymorphism (C1418T) With Coronary Artery Disease in Pakistani Population. Pak J Med Sci 2018; 34:730-735. [PMID: 30034448 PMCID: PMC6041510 DOI: 10.12669/pjms.343.14864] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
Objectives To find out the association between Thrombomodulin gene polymorphism (C1418T) with coronary artery disease in population of Karachi, Pakistan. Methods This case-control study was conducted in Tabba Heart Institute in collaboration with the National Institute of Blood Diseases, Karachi. We compared C/T dimorphism in 92 cases with 90 control subjects by allele-specific amplification. The results of PCR were confirmed by Gene sequencing. All the laboratory methods were strictly in compliance with the international standards. All variables that were either statistically significant in the univariate analyses or potentially important with respect to prevention or biologically relevant variables were included in logistic-regression analyses. Potential confounding was assessed with the use of multivariate models adjusted for participant's characteristics and other major risk factors for coronary artery disease. All reported p values are two-tailed, with statistical significance at p value < 0.05. Results The frequency of CC, C/T and TT genotype was 81 (90%), 6 (6.7%) 3 (3.3%) in controls and 67 (72.8%), 20 (21.7%) and 5 (5.4%) in cases respectively. In cases group the CT/TT genotypes were found to be significantly highly represented among the patients with coronary artery diseases when compared with control group (p-value 0.009). Conclusion TM C1418T polymorphism emerges as a risk marker in Coronary Artery Disease patients in the population of Karachi, Pakistan.
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Affiliation(s)
- Muhammad Akbar Mughal
- Dr. Muhammad Akbar Mughal, MBBS, MPhil. Associate Professor, Department of Physiology, Karachi Medical & Dental College, Karachi, Pakistan
| | - Muhammad Saleh Soomro
- Prof. Dr. Muhammad Saleh Soomro, Ph.D. Chairman. Department of Physiology, Baqai Medical University, Karachi, Pakistan
| | | | - Saba Shahid
- Dr. Saba Shahid, Ph.D. Assistant Professor, Genomics and Molecular Pathology Lab, National Institute of Blood Disease (NIBD), Karachi, Pakistan
| | - Shariq Ahmed
- Shariq Ahmed, MSc, Clinical Scientist/Lab. Supervisor, Genomics and Molecular Pathology Lab, National Institute of Blood Disease (NIBD), Karachi, Pakistan
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Alkhiary W, Abdalaal M, Mohamed El-Saddik A. The relation of thrombomodulin G33A and C1418T gene polymorphisms to the risk of acute myocardial infarction in Egyptians. EGYPTIAN JOURNAL OF MEDICAL HUMAN GENETICS 2018. [DOI: 10.1016/j.ejmhg.2017.08.007] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022] Open
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Xu J, Jin J, Tan S. Association of Thrombomodulin Gene Polymorphisms with Susceptibility to Atherosclerotic Diseases: A Meta-Analysis. Ann Hum Genet 2016; 80:172-81. [PMID: 26888356 DOI: 10.1111/ahg.12148] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2015] [Accepted: 01/06/2016] [Indexed: 01/11/2023]
Abstract
Previous studies have proved that the dysfunction of thrombomodulin (TM) plays an important role in the pathogenesis of atherosclerotic diseases. In order to reveal their inherent relationship, we conducted a meta-analysis to uncover the association between two polymorphisms -33G/A and Ala455Val (c.1418C>T) in the TM gene and atherosclerotic diseases. We carried out a systematic search in PubMed, Science Direct, BIOSIS Previews, SpringerLink, the Cochrane library, the Chinese National Knowledge Infrastructure, the Chinese Biomedical Database, the Wei Pu database, and the Wanfang Database. Pooled odds ratios (ORs) and 95% confidence intervals (CIs) were computed to show the association. We included 22 eligible studies which involved 5472 patients and 7786 controls. There were statistically significant associations between -33G/A polymorphisms in TM and the MI group under the Allele and Recessive models in Asians (G vs. A: OR = 0.67, 95%CI = 0.56-0.78, P < 0.00001; GG vs. GA+AA: OR = 0.66, 95%CI = 0.56-0.78, P < 0.00001). However, these findings of the overall and subgroups showed that Ala455Val polymorphisms did not have any relationship with atherosclerotic diseases. After Bonferroni correction, the above associations remained statistically significant. This meta-analysis provides robust evidence of association between the -33G/A polymorphism in the TM gene and the risk of myocardial infarction in Asians. The A allele may increase the incidence of MI in Asians. However, the Ala455Val variant was not associated with atherosclerotic risk. Further studies with adequate sample size are needed to verify our findings.
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Affiliation(s)
- Jie Xu
- Department of Neurology, Zhujiang Hospital, Southern Medical University, Guangzhou, China
| | - Jun Jin
- Department of Neurology, Zhumadian Zhongxin Hospital, Zhumadian, China
| | - Sheng Tan
- Department of Neurology, Zhujiang Hospital, Southern Medical University, Guangzhou, China
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Thrombomodulin -33G/A and Ala455Val polymorphisms are associated with the risk of coronary artery disease: a meta-analysis including 12 584 patients. Coron Artery Dis 2015; 26:72-7. [PMID: 25144670 DOI: 10.1097/mca.0000000000000161] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Abstract
BACKGROUND Thrombomodulin (TM) -33G/A and Ala455Val polymorphisms have been indicated to be correlated with the risk of coronary artery disease (CAD), but study results are still inclusive. Thus, a meta-analysis was carried out. MATERIALS AND METHODS Databases including PubMed, Embase, CNKI, and Web of Science (ISI) were searched. Data were extracted and pooled odds ratios (ORs) with 95% confidence intervals (CIs) were calculated. RESULTS Thirteen case-control studies on the relationship between TM -33G/A and Ala455Val polymorphisms and the risk of CAD were included in this meta-analysis. The association between the TM -33G/A polymorphism and the risk of CAD was significant (OR=1.65; 95% CI, 1.35-2.02; P<0.01; I(2)=15%). This result remained statistically significant when the adjusted ORs were combined (OR=1.50; 95% CI, 1.23-1.84; P<0.01; I(2)=0%). The association between the TM Ala455Val polymorphism and the risk of CAD was also significant (OR=1.14; 95% CI, 1.05-1.24; P<0.01; I(2)=0%). This result remained statistically significant when the adjusted ORs were combined (OR=1.57; 95% CI, 1.05-2.34; P=0.03; I(2)=32%). CONCLUSION This meta-analysis suggested that TM -33G/A and Ala455Val polymorphisms were risk factors for CAD.
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Zhang S, Zhang Z, Zhang F, Wei C, Bu Y, Zheng S, Su D. Association between thrombomodulin polymorphisms and coronary artery disease risk: a meta-analysis. Med Sci Monit 2014; 20:1407-12. [PMID: 25108690 PMCID: PMC4138070 DOI: 10.12659/msm.890717] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023] Open
Abstract
Background The associations between the thrombomodulin (TM) polymorphisms and coronary artery disease (CAD) risk remain controversial. The aim of this study was to evaluate the association of TM polymorphisms with CAD susceptibility using a meta-analysis approach. Material/Methods All eligible studies were identified through a search of PubMed, EMBASE, and China National Knowledge Infrastructure (CNKI) before February 2014. The associations between the TM polymorphisms and CAD risk was assessed by odds ratios (ORs) and 95% confidence intervals (CIs). Results A total of 14 case-control studies, including 5493 cases and 8297 controls, were eventually collected. There was a significant association between TM -33G/A polymorphism and CAD risk (OR=1.61; 95% CI, 1.35–1.92; I2=15%). The TM Ala455Val polymorphism was also associated with a significantly increased CAD risk (OR=1.14; 95% CI, 1.05–1.24; I2=0%). These results remained statistically significant when the adjusted ORs were combined. Conclusions Our results suggest that TM-33G/A and Ala455Val polymorphisms are risk factors for CAD.
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Affiliation(s)
- Shuai Zhang
- Emergency Center, Ji'nan Sixth People's Hospital, Zhangqiu, China (mainland)
| | - Zhe Zhang
- Emergence Center, Ji'nan Sixth People's Hospital, Zhangqiu, China (mainland)
| | - Feng Zhang
- Emergence Center, Ji'nan Sixth People's Hospital, Zhangqiu, China (mainland)
| | - Chuanxiang Wei
- Emergence Center, Ji'nan Sixth People's Hospital, Zhangqiu, China (mainland)
| | - Ying Bu
- Emergence Center, Ji'nan Sixth People's Hospital, Zhangqiu, China (mainland)
| | - Siliang Zheng
- Emergence Center, Ji'nan Sixth People's Hospital, Zhangqiu, China (mainland)
| | - Dexing Su
- Emergence Center, Ji'nan Sixth People's Hospital, Zhangqiu, China (mainland)
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