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Jiang H, Luo S, Zhou J, Huang W, Li L, Zhang X, He J, Chen J. Skin Microbiota Was Altered in Crocodile Lizards (Shinisaurus crocodilurus) With Skin Ulcer. Front Vet Sci 2022; 9:817490. [PMID: 35237680 PMCID: PMC8884271 DOI: 10.3389/fvets.2022.817490] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2021] [Accepted: 01/11/2022] [Indexed: 02/02/2023] Open
Abstract
Skin diseases commonly affect reptiles, but their relationships to the closely related skin microbiome are not well-understood. In recent years, both the wild and captive populations of the crocodile lizard, a Class I protected endangered animal in China, have suffered serious skin diseases that hamper the rescue and release projects for their conservation. This study conducted a detailed prevalence investigation of a major dermatosis characterized by foot skin ulcer in crocodile lizards. It should be noticed that skin ulcer has been prevalent in both captive and wild populations. There was positive correlation between skin ulcer and temperature, while no significant relationship between skin ulcer and humidity, sex, and age. We further studied the relationship between skin ulcer and the skin microbiota using meta-taxonomics. Results showed that the skin microbiota of crocodile lizards was significantly different from those of the environmental microbial communities, and that skin microbiota had a significant relationship with skin ulcer despite the impact of environment. Both bacterial and fungal communities on the ulcerated skin were significantly changed, which was characterized by lower community diversity and different dominant microbes. Our findings provide an insight into the relationship between skin microbiota and skin disease in reptile, serving as a reference for dermatological etiology in wildlife conservation.
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Affiliation(s)
- Haiying Jiang
- Guangdong Key Laboratory of Animal Conservation and Resource Utilization, Guangdong Public Laboratory of Wild Animal Conservation and Utilization, Institute of Zoology, Guangdong Academy of Sciences, Guangzhou, China
| | - Shuyi Luo
- Guangxi Daguishan Crocodile Lizard National Nature Reserve, Hezhou, China
| | - Jiabin Zhou
- Guangdong Key Laboratory of Animal Conservation and Resource Utilization, Guangdong Public Laboratory of Wild Animal Conservation and Utilization, Institute of Zoology, Guangdong Academy of Sciences, Guangzhou, China
| | - Wenzhong Huang
- Guangdong Key Laboratory of Animal Conservation and Resource Utilization, Guangdong Public Laboratory of Wild Animal Conservation and Utilization, Institute of Zoology, Guangdong Academy of Sciences, Guangzhou, China
| | - Linmiao Li
- Guangdong Key Laboratory of Animal Conservation and Resource Utilization, Guangdong Public Laboratory of Wild Animal Conservation and Utilization, Institute of Zoology, Guangdong Academy of Sciences, Guangzhou, China
| | - Xiujuan Zhang
- Guangdong Key Laboratory of Animal Conservation and Resource Utilization, Guangdong Public Laboratory of Wild Animal Conservation and Utilization, Institute of Zoology, Guangdong Academy of Sciences, Guangzhou, China
| | - Jiasong He
- Guangxi Daguishan Crocodile Lizard National Nature Reserve, Hezhou, China
| | - Jinping Chen
- Guangdong Key Laboratory of Animal Conservation and Resource Utilization, Guangdong Public Laboratory of Wild Animal Conservation and Utilization, Institute of Zoology, Guangdong Academy of Sciences, Guangzhou, China
- *Correspondence: Jinping Chen
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Ehsan R, Rahman A, Paul SI, Ador MAA, Haque MS, Akter T, Rahman MM. Aeromonas veronii isolated from climbing perch (Anabas testudineus) suffering from epizootic ulcerative syndrome (EUS). AQUACULTURE AND FISHERIES 2021. [DOI: 10.1016/j.aaf.2021.11.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Becking T, Kiselev A, Rossi V, Street-Jones D, Grandjean F, Gaulin E. Pathogenicity of animal and plant parasitic Aphanomyces spp and their economic impact on aquaculture and agriculture. FUNGAL BIOL REV 2021. [DOI: 10.1016/j.fbr.2021.08.001] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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Foysal MJ, Lisa AK. Isolation and characterization of Bacillus sp. strain BC01 from soil displaying potent antagonistic activity against plant and fish pathogenic fungi and bacteria. JOURNAL OF GENETIC ENGINEERING AND BIOTECHNOLOGY 2019; 16:387-392. [PMID: 30733751 PMCID: PMC6353715 DOI: 10.1016/j.jgeb.2018.01.005] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/16/2017] [Revised: 01/23/2018] [Accepted: 01/26/2018] [Indexed: 10/26/2022]
Abstract
Fungal and bacterial pathogens infect a diverse range of hosts including various plant and animal species. Fungal and bacterial diseases, especially of plants and aquatic animals, such as fish, lead to significant damage to crops and aquaculture, respectively, worldwide. The present study was conducted to isolate and characterize potent Bacillus strains with significant antagonistic activity against the major plant and fish pathogenic fungi and bacteria. We randomly collected 22 isolates of Bacillus from the soil, rhizosphere, and sediment from different parts of Bangladesh. Initial characterization, based on in vitro antagonistic activity on the culture plate, resulted in the selection of four gram-positive Bacillus sp. isolates. Among these, the isolate BC01, obtained from soil demonstrated the highest broad-spectrum anti-bacterial and anti-fungal activities. We confirmed the genus of BC01 to be Bacillus by morphological and biochemical tests as well as using molecular data analysis tools, including the study of 16s rDNA, phylogenetic relationship, and evolutionary divergence scores. The isolate significantly inhibited the mycelial growth of the plant pathogen, Penicillium digitatum and fish pathogen, Aphanomyces invadans in vitro. The anti-bacterial effect of the isolate was also evaluated against Pseudomonas spp. and Xanthomonas spp., the two deadliest plant pathogens, and Aeromonas veronii, Pseudomonas fluorescens, and Streptococcus iniae, three major fish pathogens that are primarily responsible for global aquaculture loss. The results of the present study could pave the way for developing potent drugs to combat microbial infection of plants and fish.
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Affiliation(s)
- Md Javed Foysal
- Department of Genetic Engineering and Biotechnology, Shahjalal University of Science and Technology, Sylhet 3114, Bangladesh.,School of Molecular and Life Sciences, Curtin University, WA 6845, Australia
| | - Asura Khanam Lisa
- Department of Biotechnology and Genetic Engineering, Bangabandhu Sheikh Mujibur Rahman Science and Technology University, Gopalganj 8100, Bangladesh
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Afzali SF, Mohd Daud HH, Sharifpour I, Afsharnasab M, Shankar S. Experimental infection of Aphanomyces invadans and susceptibility in seven species of tropical fish. Vet World 2016; 8:1038-44. [PMID: 27047195 PMCID: PMC4774769 DOI: 10.14202/vetworld.2015.1038-1044] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2015] [Revised: 07/18/2015] [Accepted: 07/26/2015] [Indexed: 11/16/2022] Open
Abstract
Aim: Epizootic ulcerative syndrome (EUS) causes by aquatic oomycete fungus, Aphanomyces invadans is a dangerous fish disease of a wide range of fresh and brackish water, wild and farmed fish throughout the world. The objective of the present study was to determine the susceptibility of a number of tropical fish species to the EUS and compare the severity of infection between experimental groups. Materials and Methods: Snakehead, Channa striata (Bloch, 1793); snakeskin gourami, Trichopodus pectoralis (Regan, 1910); koi carp, Cyprinus carpio (Linnaeus, 1758); broadhead catfish, Clarias macrocephalus (Günther, 1864); goldfish, Carassius auratus (Linnaeus, 1758); climbing perch, Anabas testudineus (Bloch, 1792); and Nile tilapia, Oreochromis niloticus (Linnaeus, 1758) were challenged by intramuscular injection using zoospores of Aphanomyces invadans (NJM9701). The infected fish skins and muscles were examined for EUS histopathological characteristics, and the results on the severity of lesions and mortality were analyzed using SPSS program. Results: All zoospore-injected fish were shown to be susceptible to the EUS infection except Nile tilapia. Although, the general histopathological pattern was similar in the zoospore-injected group, but there were some variation in granulomatous reaction, that is the presence or absence of giant cells, and time of mortality were detected. The result of statistical analysis showed that there was a significant difference between species, (c2=145.11 and p<0.01). Conclusion: Gourami, koi carp, and catfish were demonstrated to be highly susceptible while goldfish and climbing perch were found to be moderately susceptible to the EUS infection. These findings suggested that the cellular response of fish to mycotic infection and granulomatous reaction varied in different fish species, which could not be an indicator of susceptibility or resistant to the EUS itself, although it was shown that the granulation rate and the level of maturity or solidification (consolidation of granulomas) were higher in resistant fish.
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Affiliation(s)
- Seyedeh F Afzali
- Department of Veterinary Clinical Studies, Faculty of Veterinary Medicine, Universiti Putra Malaysia, 43400 UPM, Serdang, Selangor, Malaysia
| | - Hassan Hj Mohd Daud
- Department of Veterinary Clinical Studies, Faculty of Veterinary Medicine, Universiti Putra Malaysia, 43400 UPM, Serdang, Selangor, Malaysia
| | | | | | - Shiv Shankar
- Department of Food Engineering, Mokpo National University, Korea
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Gozlan RE, Marshall WL, Lilje O, Jessop CN, Gleason FH, Andreou D. Current ecological understanding of fungal-like pathogens of fish: what lies beneath? Front Microbiol 2014. [PMID: 24600442 DOI: 10.3389/fmicb.2014.00062/bibtex] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/16/2023] Open
Abstract
Despite increasingly sophisticated microbiological techniques, and long after the first discovery of microbes, basic knowledge is still lacking to fully appreciate the ecological importance of microbial parasites in fish. This is likely due to the nature of their habitats as many species of fish suffer from living beneath turbid water away from easy recording. However, fishes represent key ecosystem services for millions of people around the world and the absence of a functional ecological understanding of viruses, prokaryotes, and small eukaryotes in the maintenance of fish populations and of their diversity represents an inherent barrier to aquatic conservation and food security. Among recent emerging infectious diseases responsible for severe population declines in plant and animal taxa, fungal and fungal-like microbes have emerged as significant contributors. Here, we review the current knowledge gaps of fungal and fungal-like parasites and pathogens in fish and put them into an ecological perspective with direct implications for the monitoring of fungal fish pathogens in the wild, their phylogeography as well as their associated ecological impact on fish populations. With increasing fish movement around the world for farming, releases into the wild for sport fishing and human-driven habitat changes, it is expected, along with improved environmental monitoring of fungal and fungal-like infections, that the full extent of the impact of these pathogens on wild fish populations will soon emerge as a major threat to freshwater biodiversity.
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Affiliation(s)
- Rodolphe E Gozlan
- Unité Mixte de Recherche Biologie des Organismes et Écosystèmes Aquatiques (IRD 207, CNRS 7208, MNHN, UPMC), Muséum National d'Histoire Naturelle Paris Cedex, France ; Centre for Conservation Ecology and Environmental Sciences, School of Applied Sciences, Bournemouth University Poole, Dorset, UK
| | - Wyth L Marshall
- BC Centre for Aquatic Health Sciences Campbell River, BC, Canada
| | - Osu Lilje
- School of Biological Sciences, University of Sydney Sydney, NSW, Australia
| | - Casey N Jessop
- School of Biological Sciences, University of Sydney Sydney, NSW, Australia
| | - Frank H Gleason
- School of Biological Sciences, University of Sydney Sydney, NSW, Australia
| | - Demetra Andreou
- Centre for Conservation Ecology and Environmental Sciences, School of Applied Sciences, Bournemouth University Poole, Dorset, UK
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Gozlan RE, Marshall WL, Lilje O, Jessop CN, Gleason FH, Andreou D. Current ecological understanding of fungal-like pathogens of fish: what lies beneath? Front Microbiol 2014; 5:62. [PMID: 24600442 PMCID: PMC3928546 DOI: 10.3389/fmicb.2014.00062] [Citation(s) in RCA: 59] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2013] [Accepted: 01/30/2014] [Indexed: 11/13/2022] Open
Abstract
Despite increasingly sophisticated microbiological techniques, and long after the first discovery of microbes, basic knowledge is still lacking to fully appreciate the ecological importance of microbial parasites in fish. This is likely due to the nature of their habitats as many species of fish suffer from living beneath turbid water away from easy recording. However, fishes represent key ecosystem services for millions of people around the world and the absence of a functional ecological understanding of viruses, prokaryotes, and small eukaryotes in the maintenance of fish populations and of their diversity represents an inherent barrier to aquatic conservation and food security. Among recent emerging infectious diseases responsible for severe population declines in plant and animal taxa, fungal and fungal-like microbes have emerged as significant contributors. Here, we review the current knowledge gaps of fungal and fungal-like parasites and pathogens in fish and put them into an ecological perspective with direct implications for the monitoring of fungal fish pathogens in the wild, their phylogeography as well as their associated ecological impact on fish populations. With increasing fish movement around the world for farming, releases into the wild for sport fishing and human-driven habitat changes, it is expected, along with improved environmental monitoring of fungal and fungal-like infections, that the full extent of the impact of these pathogens on wild fish populations will soon emerge as a major threat to freshwater biodiversity.
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Affiliation(s)
- Rodolphe E. Gozlan
- Unité Mixte de Recherche Biologie des Organismes et Écosystèmes Aquatiques (IRD 207, CNRS 7208, MNHN, UPMC), Muséum National d'Histoire NaturelleParis Cedex, France
- Centre for Conservation Ecology and Environmental Sciences, School of Applied Sciences, Bournemouth UniversityPoole, Dorset, UK
| | | | - Osu Lilje
- School of Biological Sciences, University of SydneySydney, NSW, Australia
| | - Casey N. Jessop
- School of Biological Sciences, University of SydneySydney, NSW, Australia
| | - Frank H. Gleason
- School of Biological Sciences, University of SydneySydney, NSW, Australia
| | - Demetra Andreou
- Centre for Conservation Ecology and Environmental Sciences, School of Applied Sciences, Bournemouth UniversityPoole, Dorset, UK
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Adil B, Shankar KM, Kumar BTN, Patil R, Ballyaya A, Ramesh KS, Poojary SR, Byadgi OV, Siriyappagouder P. Development and standardization of a monoclonal antibody-based rapid flow-through immunoassay for the detection of Aphanomyces invadans in the field. J Vet Sci 2013; 14:413-9. [PMID: 23820211 PMCID: PMC3885734 DOI: 10.4142/jvs.2013.14.4.413] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2012] [Accepted: 02/16/2013] [Indexed: 11/20/2022] Open
Abstract
A monoclonal antibody-based flow-through immunoassay (FTA) was developed using a nitrocellulose membrane placed on the top of adsorbent pads enclosed in a plastic cassette with a test zone at the center. The FTA could be completed within 10 min. Clear purple dots against a white background indicated the presence of Aphanomyces (A.) invadans. The FTA limit of detection was 7 μg/mL for A. invadans compared to 56 μg/mL for the immunodot. FTA and polymerase chain reaction (PCR) could detect A. invadans in fish tissue homogenates at a 10(-11) dilution compared to a 10(-8) dilution by immunodot. In fish suffering from natural cases of epizootic ulcerative syndrome (EUS) collected from Mangalore, India, FTA and PCR could detect A. invadans in 100% of the samples compared to 89.04% detected by immunodot. FTA reagents were stable and produced expected results for 4 months when stored at 4~8°C. This rapid test could serve as simple and cost-effective on-site screening tool to detect A. invadans in fish from EUS outbreak areas and in ports during the shipment of live or frozen fish.
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Affiliation(s)
- B Adil
- Aquatic Health Management Laboratory, Department of Aquaculture, College of Fisheries, Karnataka Veterinary, Animal and Fisheries Sciences University, Mangalore 575002, India
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Viruses associated with epizootic ulcerative syndrome: an update. INDIAN JOURNAL OF VIROLOGY : AN OFFICIAL ORGAN OF INDIAN VIROLOGICAL SOCIETY 2012; 23:106-13. [PMID: 23997434 DOI: 10.1007/s13337-012-0108-x] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2012] [Accepted: 08/14/2012] [Indexed: 10/27/2022]
Abstract
Epizootic ulcerative syndrome is one of the most serious infections noticed in the finfish of Asia-Pacific during the last three decades. Different viral agents and a consistent fungus were isolated from the EUS infected fishes from various countries. Rhabdoviruses are by far the most isolated group of viruses followed by birnaviruses. One reovirus and a ranavirus have also been isolated from ulcerated fishes of which the ranavirus was capable of reproducing the clinical signs of the disease. Albeit heterogenic, due to frequent isolation, range of areas from which isolates have been obtained and ability to induce dermal lesions in experimental infectivity studies make rhabdoviruses one of the likely primary aetiological agents that could be triggering the initiation to EUS. However, further investigations may be required to fully establish the role of these viral agents in the induction of EUS. Viruses observed as persistent infections in fishes evidenced by their presence in cell cultures also require further investigation for their likely role in predisposing the fishes to EUS.
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Emergence of epizootic ulcerative syndrome in native fish of the Murray-Darling River System, Australia: hosts, distribution and possible vectors. PLoS One 2012; 7:e35568. [PMID: 22558170 PMCID: PMC3338419 DOI: 10.1371/journal.pone.0035568] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2011] [Accepted: 03/18/2012] [Indexed: 11/19/2022] Open
Abstract
Epizootic ulcerative syndrome (EUS) is a fish disease of international significance and reportable to the Office International des Epizootics. In June 2010, bony herring Nematalosa erebi, golden perch Macquaria ambigua, Murray cod Maccullochella peelii and spangled perch Leiopotherapon unicolor with severe ulcers were sampled from the Murray-Darling River System (MDRS) between Bourke and Brewarrina, New South Wales Australia. Histopathology and polymerase chain reaction identified the fungus-like oomycete Aphanomyces invadans, the causative agent of EUS. Apart from one previous record in N. erebi, EUS has been recorded in the wild only from coastal drainages in Australia. This study is the first published account of A. invadans in the wild fish populations of the MDRS, and is the first confirmed record of EUS in M. ambigua, M. peelii and L. unicolor. Ulcerated carp Cyprinus carpio collected at the time of the same epizootic were not found to be infected by EUS, supporting previous accounts of resistance against the disease by this species. The lack of previous clinical evidence, the large number of new hosts (n = 3), the geographic extent (200 km) of this epizootic, the severity of ulceration and apparent high pathogenicity suggest a relatively recent invasion by A. invadans. The epizootic and associated environmental factors are documented and discussed within the context of possible vectors for its entry into the MDRS and recommendations regarding continued surveillance, research and biosecurity are made.
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Oidtmann B. Review of biological factors relevant to import risk assessments for epizootic ulcerative syndrome (Aphanomyces invadans). Transbound Emerg Dis 2011; 59:26-39. [PMID: 21733135 DOI: 10.1111/j.1865-1682.2011.01241.x] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Epizootic ulcerative syndrome (EUS) is a disease affecting both wild and farmed fish in freshwater and estuarine environments. After it was first described in Japan in 1971, the disease has spread widely across Asia and to some regions of Australia, North America and Africa. In Asia and Africa, the spread of the disease has substantially affected livelihoods of fish farmers and fishermen. No reports are yet published showing the presence of the disease in Europe or South America. Given its epizootic nature and its broad susceptible fish species range, it would appear that the disease has the potential for further spread. This study provides a review of the scientific literature on several biological factors of the pathogen, Aphanomyces invadans, associated with the disease EUS and aspects of the disease that are relevant to undertaking import risk assessments (IRA) covering (i) Life cycle and routes of transmission; (ii) Minimum infectious dose; (iii) Tissue localization and pathogen load; (iv) Predisposing factors for infection and factors influencing expression of disease; (v) Carrier state in fish; (vi) Diagnostic methods; (vii) Survival in the environment; (viii) Permissive temperature range; (ix) Stability of the agent in aquatic animal products; (x) Prevalence of infection; and (xi) Affected life stages. Much of the biological information presented is relevant to a broad range of risk questions. Areas where data are lacking were identified, and the information provided is put into context with other aspects that need to be addressed in an IRA.
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Affiliation(s)
- B Oidtmann
- Epidemiology and Risk Team, Centre for Environment, Fisheries and Aquaculture Science (Cefas), Weymouth, Dorset, UK.
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Songe MM, Hang’ombe MB, Phiri H, Mwase M, Choongo K, Van der Waal B, Kanchanakhan S, Reantaso MB, Subasinghe RP. Field observations of fish species susceptible to epizootic ulcerative syndrome in the Zambezi River basin in Sesheke District of Zambia. Trop Anim Health Prod 2011; 44:179-83. [DOI: 10.1007/s11250-011-9906-1] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 05/27/2011] [Indexed: 10/18/2022]
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