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Mahanta K, Bhattacharyya PN, Sharma AK, Rajkhowa D, Lesueur D, Verma H, Parit R, Deka J, Medhi BK, Kohli A. Residue and soil dissipation kinetics of chloroacetanilide herbicides on rice (Oryzae sativa L.) and assessing the impact on soil microbial parameters and enzyme activity. ENVIRONMENTAL MONITORING AND ASSESSMENT 2023; 195:910. [PMID: 37392291 DOI: 10.1007/s10661-023-11513-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2022] [Accepted: 06/11/2023] [Indexed: 07/03/2023]
Abstract
The present investigation determines the persistence of herbicides like butachlor and pretilachlor in Indian soil, and their impact on soil biological properties including microbial biomass carbon (MBC), total microbial population numbers, and enzyme activities. Butachlor was degraded faster in autumn rice soil (t1/2 of 10-13 days) than in winter rice soil (half-life of 16-18 days). The t1/2 of pretilachlor in winter rice was 12-16 days. Regardless of the seasons under cultivation, no pesticide residue was detected in rice at harvest. Herbicides induced an initial decline (0-14th days after application) in MBC (averages of 332.7-478.4 g g-1 dry soil in autumn rice and 299.6-444.3 g g-1 dry soil in winter rice), microbial populations (averages of 6.4 cfu g-1 in autumn rice and 4.6 cfu g-1 in winter rice), and phosphatase (averages of 242.6-269.3 μg p-nitrophenol g-1 dry soil h-1 in autumn rice and 188.2-212.2 μg p-nitrophenol g-1 dry soil h-1 in winter rice). The application of herbicides favored dehydrogenase (averages of 123.1-156.7 g TPF g-1 dry soil in autumn and 126.7-151.1 g TPF g-1 dry soil in winter) and urease activities (averages of 279.0-340.4 g NH4 g-1 soil 2 h-1 in autumn and 226.7-296.5 g NH4 g-1 soil 2 h-1 in winter) in rice soil at 0-14th DAA. The study suggests that applications of butachlor and pretilachlor at the rates of 1000 g ha-1 and 750 g ha-1, respectively, to control the weeds in the transplanted rice fields do not have any negative impact on the harvested rice and associated soil environment.
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Affiliation(s)
- Kaberi Mahanta
- Assam Agricultural University, Jorhat 785 013, Assam, India
| | | | | | - Dipjyoti Rajkhowa
- ICAR Research Complex for NEH Region, Nagaland Centre, Nagaland, 797106, India
| | - Didier Lesueur
- Centre de Coopération Internationale en Recherche Agronomique pour le Développent (CIRAD), UMR Eco&Sols, Hanoi, Vietnam
- Eco & Sols, Université de Montpellier (UMR), CIRAD, Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (INRAE), Institut de Recherche pour le Développement (IRD), 34060 Montpellier, Montpellier SupAgro, France
- Alliance of Biodiversity International and International Center for Tropical Agriculture (CIAT), Asia hub, Common Microbial Biotechnology Platform (CMBP), Hanoi, Vietnam
- School of Life and Environmental Sciences, Faculty of Science, Engineering and Built Environment-Deakin University, Melbourne, VIC 3125, Australia
- Chinese Academy of Tropical Agricultural Sciences, Rubber Research Institute, Haikou, China
| | - Harendra Verma
- ICAR Research Complex for NEH Region, Nagaland Centre, Nagaland, 797106, India
| | - Rajat Parit
- Assam Agricultural University, Jorhat 785 013, Assam, India
| | - Jayanta Deka
- Assam Agricultural University, Jorhat 785 013, Assam, India
| | | | - Anshuman Kohli
- Bihar Agriculture University, Sabour 813210, Bihar, India
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Carpio MJ, Andrades MS, Herrero-Hernández E, Marín-Benito JM, Sánchez-Martín MJ, Rodríguez-Cruz MS. Changes in vineyard soil parameters after repeated application of organic-inorganic amendments based on spent mushroom substrate. ENVIRONMENTAL RESEARCH 2023; 221:115339. [PMID: 36682445 DOI: 10.1016/j.envres.2023.115339] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/25/2022] [Revised: 01/13/2023] [Accepted: 01/18/2023] [Indexed: 06/17/2023]
Abstract
The changes of physicochemical and biochemical parameters of a silty loam (S1) and sandy loam (S2) vineyard soils added with spent mushroom substrate (SMS) or SMS composted with ophite (OF) as rock dust (SMS + OF) were studied. Two doses of SMS or SMS + OF (25 and 100 Mg ha-1) were applied for two consecutive years (2020-2021) and changes of soil physicochemical parameters, and dehydrogenase activity (DHA), respiration (RES), microbial biomass (BIO), and the phospholipid fatty acids (PLFAs) profile were assayed on a temporal basis. The results showed an increase in soil organic carbon (OC) content, total and mineralised N, P, and K, especially when the highest SMS dose was applied to soils. Repeated application caused OC content over time up to 2.3 times higher than initial content in the silty loam soil. This increase was not observed in sandy soil, possibly due to a higher bioavailability of OC, as indicated by the evolution of extractable humic acid/fulvic acid pools. In both soils, all biochemical parameters increased after amendment, being favoured both by the OC and by the presence of OF. Significant positive correlations were found between DHA, RES and BIO, and OC content especially in the first part and then levelled off after the second dose application. Total bacterial or fungal PLFAs patterns reflected the variation of BIO by SMS application. The higher growth of fungi vs. bacterial community in amended soils was recorded after the first SMS application, although the opposite effect occurred after the second application, with similar results in both soils. The findings indicate that the application of SMS or SMS + OF in vineyard soils could be an appropriate agronomic management practice for maintaining soil sustainability, although doses and application times of these amendments should first be evaluated depending on soil texture.
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Affiliation(s)
- M José Carpio
- Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA-CSIC), Cordel de Merinas 40-52, 37008, Salamanca, Spain
| | - M Soledad Andrades
- Departamento de Agricultura y Alimentación, Universidad de La Rioja, Madre de Dios 51, 26006, Logroño, Spain
| | - Eliseo Herrero-Hernández
- Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA-CSIC), Cordel de Merinas 40-52, 37008, Salamanca, Spain; Departamento de Química Analítica, Nutrición y Bromatología, Universidad de Salamanca, Plaza de Los Caídos s/n, 37008, Salamanca, Spain
| | - Jesús M Marín-Benito
- Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA-CSIC), Cordel de Merinas 40-52, 37008, Salamanca, Spain.
| | - María J Sánchez-Martín
- Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA-CSIC), Cordel de Merinas 40-52, 37008, Salamanca, Spain
| | - M Sonia Rodríguez-Cruz
- Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA-CSIC), Cordel de Merinas 40-52, 37008, Salamanca, Spain
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Ujjainiya P, Choudhary M, Jatav HS, Tokala VY, Rajput VD, Minkina T. Impact of Weed Management Practices on Soil Microflora and Dehydrogenase Enzyme Activity Under Varying Levels of Nitrogen in Winter Season Onion (Allium cepa L.). BULLETIN OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY 2022; 108:430-436. [PMID: 34021771 DOI: 10.1007/s00128-021-03265-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/30/2020] [Accepted: 05/15/2021] [Indexed: 06/12/2023]
Abstract
The study was conducted to evaluate the suitability of different weed management practices under influence of varying levels of N doses to test their effects on the various soil microflora and dehydrogenase enzyme activity in the winter onion field during 2016-2017 and 2017-2018. There were a total of twenty eight treatments replicated three times under the split-plot design (SPD). The treatments associated with weed management practices were applied to the main plots and the different N doses were given in each subplot. Microbial population and dehydrogenase enzyme activity in soil and crop weed competition index were determined. The two-hand weeding (HW) at 20 and 40 days after transplanting (DAT) of onion seedlings as well as preplant application of oxyfluorfen along with one HW at 40 DAT, exhibited a significant increase in dehydrogenase activity and microbial population in the soil when the N was applied at 100 kg ha-1. The study suggests that suitable weed management practices for the winter onion exerts a transient impact on soil microbial population, maintained good soil health and reduced crop-weed competition (CWC) with relatively less environmental hazards.
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Affiliation(s)
- Pushpa Ujjainiya
- Sri Karan Narendra Agriculture University, Jobner-Jaipur, Rajasthan, India
| | - Maliram Choudhary
- Sri Karan Narendra Agriculture University, Jobner-Jaipur, Rajasthan, India
| | - Hanuman S Jatav
- Sri Karan Narendra Agriculture University, Jobner-Jaipur, Rajasthan, India.
| | - Vijay Y Tokala
- Sri Karan Narendra Agriculture University, Jobner-Jaipur, Rajasthan, India
- Post Harvest Physiology, Curtin University, Perth, WA, Australia
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Effect of Organic Residues on Pesticide Behavior in Soils: A Review of Laboratory Research. ENVIRONMENTS 2021. [DOI: 10.3390/environments8040032] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
The management of large volumes of organic residues generated in different livestock, urban, agricultural and industrial activities is a topic of environmental and social interest. The high organic matter content of these residues means that their application as soil organic amendments in agriculture is considered one of the more sustainable options, as it could solve the problem of the accumulation of uncontrolled wastes while improving soil quality and avoiding its irreversible degradation. However, the behavior of pesticides applied to increase crop yields could be modified in the presence of these amendments in the soil. This review article addresses how the adsorption–desorption, dissipation and leaching of pesticides in soils is affected by different organic residues usually applied as organic amendments. Based on the results reported from laboratory studies, the influence on these processes has been evaluated of multiple factors related to organic residues (e.g., origin, nature, composition, rates, and incubation time of the amended soils), pesticides (e.g., with different use, structure, characteristics, and application method), and soils with different physicochemical properties. Future perspectives on this topic are also included for highlighting the need to extend these laboratory studies to field and modelling scale to better assess and predict pesticide fate in amended soil scenarios.
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Wang H, Zeng Y, Guo C, Zheng X, Ding C, Lu G, Dang Z. Soil rehabilitation shaped different patterns of bacterial and archaeal community in AMD-irrigated paddy soil. CHEMOSPHERE 2021; 263:128259. [PMID: 33297204 DOI: 10.1016/j.chemosphere.2020.128259] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/07/2020] [Revised: 08/28/2020] [Accepted: 09/01/2020] [Indexed: 06/12/2023]
Abstract
Microorganisms are essential for soil rehabilitation and long-term sustainability of established plants. However, the recovery process of microorganisms in AMD-irrigated paddy soil is poorly understood at present. To verify this, we sampled AMD-irrigated paddy soils before at different rehabilitation stages by characterizing bacteria and archaea community from a chronosequence of AMD-irrigated rehabilitation to pre-disturbance levels from references sites. Next-generation sequencing is used to describe shifts in diversity and taxonomic composition of bacterial and archaeal. Co-occurrence networks are constructed to reveal potential microbial interaction patterns. The result showed bacterial community followed an observable taxonomic transition overtimes, with community structure becoming more similar to that of unmined reference sites. But the archaeal community only showed a seasonal change, which may hint that the archaeal community needs more time in rehabilitation. Both bacterial and archaeal community composition changes were apparent at high taxonomic levels, bacterial communities become dominated by Proteobacteria phylum, and archaeal community was dominated by Crenarchaeota, we proposed the possible reason is bacterial community were mainly derived by soil pH while the archaeal community was impacted by heavy metal. The bacterial co-occurrence networks increased in complexity during succession, improving the community's resistance to environmental disturbance, while the archaeal did not change monotonically with time. This study highlights the distinct recovery pattern of the bacterial and archaeal community during AMD-irrigated paddy soil rehabilitation, which provides a deep understanding of their role in paddy soil, and subsequent harnessing of their potential to pave the way in future rehabilitation strategies for mined sites.
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Affiliation(s)
- Han Wang
- School of Environment and Energy, South China University of Technology, Guangzhou, 510006, PR China; State Key Laboratory of Pollution Control and Resources Reuse, Shanghai Institute of Pollution Control and Ecological Security, College of Environmental Science and Engineering, Tongji University, Shanghai, 200092, PR China
| | - Yufei Zeng
- School of Environment and Energy, South China University of Technology, Guangzhou, 510006, PR China
| | - Chuling Guo
- School of Environment and Energy, South China University of Technology, Guangzhou, 510006, PR China; The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, South China University of Technology, Guangzhou, 510006, PR China.
| | - Xiongkai Zheng
- School of Environmental Science and Engineering, Zhongkai University of Agriculture and Engineering, Guangzhou, 510006, PR China
| | - Cui Ding
- School of Environment and Energy, South China University of Technology, Guangzhou, 510006, PR China
| | - Guining Lu
- School of Environment and Energy, South China University of Technology, Guangzhou, 510006, PR China; The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, South China University of Technology, Guangzhou, 510006, PR China
| | - Zhi Dang
- School of Environment and Energy, South China University of Technology, Guangzhou, 510006, PR China; The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, South China University of Technology, Guangzhou, 510006, PR China
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Serbent MP, Dos Anjos Borges LG, Quadros A, Marconatto L, Tavares LBB, Giongo A. Prokaryotic and microeukaryotic communities in an experimental rice plantation under long-term use of pesticides. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2021; 28:2328-2341. [PMID: 32880839 DOI: 10.1007/s11356-020-10614-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2020] [Accepted: 08/23/2020] [Indexed: 06/11/2023]
Abstract
Conventional agricultural practices, such as rice plantations, often contaminate the soil and water with xenobiotics. Here we evaluated the microbiota composition in experimental rice planting with a record of prolonged pesticide use, using 16S and 18S rRNA amplicon sequencing. We investigated four components of a complete agricultural system: affluent water (A), rice rhizosphere soil (R), sediment from a storage pond (S), and effluent (E) water (drained from the storage pond). Despite the short spatial distance between our sites, the beta diversity analysis of bacterial communities showed two well-defined clusters, separating the water and sediment/rhizosphere samples; rhizosphere and sediment were richer while the effluent was less diverse. Overall, the site with the highest evenness was the rhizosphere. Unlike the bacterial communities, Shannon diversity of microeukaryotes was significantly different between A and E. The effluent presented the lowest values for all ecological indexes tested and differed significantly from all sampled sites, except on evenness. When mapped the metabolic pathways, genes corresponding to the degradation of aromatic compounds, including genes related to pesticide degradation, were identified. The most abundant genes were related to the degradation of benzoate. Our results indicate that the effluent is a selective environment for fungi. Interestingly, the overall fungal diversity was higher in the affluent, the water that reached the system before pesticide application, and where the prokaryotic diversity was the lowest. The affluent and effluent seem to have the lowest environmental quality, given the presence of bacteria genera previously recorded in environments with high concentrations of pesticide residues. The microbiota, environmental characteristics, and pesticide residues should be further studied and try to elucidate the potential for pesticide degradation by natural consortia. Thus, extensive comparative studies are needed to clarify the microbial composition, diversity, and functioning of rice cultivation environments, and how pesticide use changes may reflect differences in microbial structure.
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Affiliation(s)
- Maria Pilar Serbent
- Santa Catarina State University - UDESC, Ibirama, Brazil.
- Environmental Engineering Graduate Program, PPGEA, Regional University of Blumenau - FURB, Blumenau, Brazil.
| | - Luiz Gustavo Dos Anjos Borges
- Institute of Petroleum and Natural Resources (IPR), Pontifical Catholic University of Rio Grande do Sul (PUCRS), Porto Alegre, RS, Brazil
| | - Aline Quadros
- Pumpkin Science Communication, Porto Alegre, RS, Brazil
| | - Letícia Marconatto
- Institute of Petroleum and Natural Resources (IPR), Pontifical Catholic University of Rio Grande do Sul (PUCRS), Porto Alegre, RS, Brazil
| | | | - Adriana Giongo
- Environmental Engineering Graduate Program, PPGEA, Regional University of Blumenau - FURB, Blumenau, Brazil
- Institute of Petroleum and Natural Resources (IPR), Pontifical Catholic University of Rio Grande do Sul (PUCRS), Porto Alegre, RS, Brazil
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Frumi Camargo A, Venturin B, Bordin ER, Scapini T, Spitza Stefanski F, Klanovicz N, Dalastra C, Kubeneck S, Preczeski KP, Rossetto V, Weirich S, Carezia C, Ulkovski C, Reichert Júnior FW, Müller C, Fongaro G, Mossi AJ, Treichel H. A Low-Genotoxicity Bioherbicide Obtained from Trichoderma koningiopsis Fermentation in a Stirred-Tank Bioreactor. Ind Biotechnol (New Rochelle N Y) 2020. [DOI: 10.1089/ind.2019.0024] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Affiliation(s)
- Aline Frumi Camargo
- Laboratory of Microbiology and Bioprocess and Federal University of Fronteira Sul, Erechim, Brazil
| | - Bruno Venturin
- Laboratory of Microbiology and Bioprocess and Federal University of Fronteira Sul, Erechim, Brazil
| | - Eduarda Roberta Bordin
- Laboratory of Microbiology and Bioprocess and Federal University of Fronteira Sul, Erechim, Brazil
| | - Thamarys Scapini
- Laboratory of Microbiology and Bioprocess and Federal University of Fronteira Sul, Erechim, Brazil
| | - Fábio Spitza Stefanski
- Laboratory of Microbiology and Bioprocess and Federal University of Fronteira Sul, Erechim, Brazil
| | - Natalia Klanovicz
- Laboratory of Microbiology and Bioprocess and Federal University of Fronteira Sul, Erechim, Brazil
| | - Caroline Dalastra
- Laboratory of Microbiology and Bioprocess and Federal University of Fronteira Sul, Erechim, Brazil
| | - Simone Kubeneck
- Laboratory of Microbiology and Bioprocess and Federal University of Fronteira Sul, Erechim, Brazil
| | - Karina Paula Preczeski
- Laboratory of Microbiology and Bioprocess and Federal University of Fronteira Sul, Erechim, Brazil
| | - Vanusa Rossetto
- Laboratory of Microbiology and Bioprocess and Federal University of Fronteira Sul, Erechim, Brazil
| | - Sabrina Weirich
- Laboratory of Agroecology, Federal University of Fronteira Sul, Erechim, Brazil
| | - Carine Carezia
- Laboratory of Agroecology, Federal University of Fronteira Sul, Erechim, Brazil
| | - Cleiton Ulkovski
- Laboratory of Agroecology, Federal University of Fronteira Sul, Erechim, Brazil
| | - Francisco Wilson Reichert Júnior
- Nucleus of Studies in Agrobiodiversity, Center of Agrarian Sciences, and Federal University of Santa Catarina, Florianópolis, Brazil
| | - Caroline Müller
- Laboratory of Microbiology and Bioprocess and Federal University of Fronteira Sul, Erechim, Brazil
| | - Gislaine Fongaro
- Laboratory of Microbiology and Bioprocess and Federal University of Fronteira Sul, Erechim, Brazil
- Laboratory of Applied Virology, Federal University of Santa Catarina, Florianópolis, Brazil
| | - Altemir José Mossi
- Laboratory of Agroecology, Federal University of Fronteira Sul, Erechim, Brazil
| | - Helen Treichel
- Laboratory of Microbiology and Bioprocess and Federal University of Fronteira Sul, Erechim, Brazil
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Abstract
Composting is the controlled conversion of degradable organic products and wastes into stable products with the aid of microorganisms. Composting is a long-used technology, though it has some shortcomings that have reduced its extensive usage and efficiency. The shortcomings include pathogen detection, low nutrient status, long duration of composting, long mineralization duration, and odor production. These challenges have publicized the use of chemical fertilizers produced through the Haber–Bosch process as an alternative to compost over time. Chemical fertilizers make nutrients readily available to plants, but their disadvantages outweigh their advantages. For example, chemical fertilizers contribute to greenhouse effects, environmental pollution, death of soil organisms and marine inhabitants, ozone layer depletion, and human diseases. These have resulted in farmers reverting to the application of composts as a means of restoring soil fertility. Composting is a fundamental process in agriculture and helps in the recycling of farm wastes. The long duration of composting is a challenge; this is due to the presence of materials that take a longer time to compost, especially during co-composting. This review discusses the proper management of wastes through composting, different composting methods, the factors affecting composting, long-duration composting, the mechanism behind it, the present trends in composting and prospects. The extraction of mono-fertilizers from compost, development of strips to test for the availability of heavy metals and pathogens as well as an odor-trapping technique can go a long way in enhancing composting techniques. The addition of activators to raw materials can help to improve the nutritional quality of compost. This review further recommends that degradable organic material in which composts slowly should be assessed for their ability to mineralize slowly, which could make them advantageous to perennial or biennial crops. Viricides, fungicides, anti-nematodes, and anti-bacterial of plant or organic sources could as well be added to improve compost quality. The enhancement of composting duration will also be useful.
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Pertile M, Antunes JEL, Araujo FF, Mendes LW, Van den Brink PJ, Araujo ASF. Responses of soil microbial biomass and enzyme activity to herbicides imazethapyr and flumioxazin. Sci Rep 2020; 10:7694. [PMID: 32376948 PMCID: PMC7203139 DOI: 10.1038/s41598-020-64648-3] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2019] [Accepted: 04/15/2020] [Indexed: 01/22/2023] Open
Abstract
The use of herbicides is important for controlling weeds in crops. However, they can present impacts on soil properties, such as biological properties. In this study, we evaluated the responses of soil microbial biomass and enzymes activity to the application of the herbicides imazethapyr and flumioxazin and their mixture in an experiment under laboratory conditions, using soils with a different history of use. Soil microbial biomass C (MBC) decreased, while microbial biomass N (MBN) was not affected after the application of the herbicides as compared to the control. Soil respiration, respiratory quotient, and dehydrogenase (DHA) activity increased significantly after the application of the herbicides compared to the control. The hydrolysis of fluorescein diacetate (FDA) was not significantly different between the control and the herbicide treatments. The principal response curve showed the largest initial effects for the flumioxazin, followed by imazethapyr and their mixture. Flumioxazin had a different influence on soil respiration and respiratory quotient than imazethapyr and their mixture. Finally, the effects of herbicides on soil microbial biomass and enzymes are short-term as we observed recovery in the biological parameters over time.
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Affiliation(s)
- Mariane Pertile
- Soil Quality Lab., Agricultural Science Center, Federal University of Piauí, Teresina, PI, Brazil
| | | | | | | | - Paul J Van den Brink
- Wageningen Environmental Research, Wageningen, The Netherlands.,Aquatic Ecology and Water Quality Management Group, Wageningen University, Wageningen, The Netherlands
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Sharma N, Kaur P, Jain D, Bhullar MS. In-vitro evaluation of rice straw biochars' effect on bispyribac-sodium dissipation and microbial activity in soil. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2020; 191:110204. [PMID: 31954925 DOI: 10.1016/j.ecoenv.2020.110204] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/18/2019] [Revised: 12/11/2019] [Accepted: 01/11/2020] [Indexed: 06/10/2023]
Abstract
Dissipation of bispyribac-sodium was estimated in an unamended sandy loam soil and soil amended with rice straw and its biochars in pot culture experiment. Effect of herbicide and amendments on abundance and activity of soil microbial parameters was also assessed by determining soil biological parameters. Amendment type, application rate and soil moisture had differential influence on bispyribac-sodium dissipation and soil's microbial parameters. Amendment of soil with rice straw and its biochars enhanced the dissipation of bispyribac-sodium (DT50 = 7.55-18.44 days) as compared to unamended soil (DT50 = 23.13-28.60 days) and dissipation decreased in this order: rice straw >350BC > 550BC > CBC amended soil > unamended soil. Dissipation of bispyribac-sodium decreased with increase in amendment level of rice straw and its biochars in soil. Irrespective of amendment type and application rate, bispyribac sodium was more persistent under submerged conditions than at field capacity and its DT50 was 10.13 to 28.60 and 7.55-27.14 days, respectively. Dehydrogenase, alkaline phosphatase activity and bacterial population indicated that application of the organic amendment decreased negative effects of the herbicide on soil enzymatic activities. These findings prove that biostimulation using rice straw and its biochars has the potential to decrease the persistence of bispyribac-sodium and minimize its environmental hazards.
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Affiliation(s)
- Neha Sharma
- Department of Chemistry, Punjab Agricultural University, Ludhiana, Punjab, India
| | - Pervinder Kaur
- Department of Agronomy, Punjab Agricultural University, Ludhiana, Punjab, India.
| | - Deepali Jain
- Department of Agronomy, Punjab Agricultural University, Ludhiana, Punjab, India
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Nathan VK, Jasna V, Parvathi A. Pesticide application inhibit the microbial carbonic anhydrase-mediated carbon sequestration in a soil microcosm. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2020; 27:4468-4477. [PMID: 31832940 DOI: 10.1007/s11356-019-06503-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/04/2019] [Accepted: 09/10/2019] [Indexed: 06/10/2023]
Abstract
Heterotrophic system for carbon sequestration is gaining importance in the recent decades. Carbonic anhydrase (CA) is a major enzyme involved in carbon sequestration and biomineralization process. In this paper, we evaluate the effect of pesticide on CA activity using inhibitory assay. 2,4-D, being one of the most extensively used pesticide, being deleterious to soil health, its usage should be minimized to regain the soil health. Maximum inhibitory constant (Ki) was observed for 5% 2,4-D (49.53 mM) followed by 5% glyphosate (43.92 mM). The maximum Km increase with increase in pesticide concentration by 3.05-fold was in case of glyphosate which was higher than that of 2,4-D (2.08-fold) and dichlorvos (2.38-fold). Moreover, we evaluated the carbon sequestration using CA enzyme in the soil microcosm. In the present study, we identified the negative impact of 2,4-D on carbonic anhydrase produced by Bacillus halodurans PO15. The inhibition was a mixed type and had significantly lowered the carbon reduction to about 2.38 ± 0.17% in a soil microcosm study. Based on the molecular docking, the inhibition was contributed due to weak H-bonding interaction with amino acid residues (Gly65, Gly95, Val147, Ser150 and Gly65, Ser146, and Ser150).
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Affiliation(s)
- V K Nathan
- CSIR-National Institute Oceanography, Regional Centre, Dr. Salim Ali Road, Post Box No. 1913, Kochi, 682 018, India
- School of Chemical and Biotechnology, SASTRA Deemed to be University, Thirumalaisamudram, Thanjavur, Tamil Nadu, 613 401, India
| | - V Jasna
- CSIR-National Institute Oceanography, Regional Centre, Dr. Salim Ali Road, Post Box No. 1913, Kochi, 682 018, India
| | - A Parvathi
- CSIR-National Institute Oceanography, Regional Centre, Dr. Salim Ali Road, Post Box No. 1913, Kochi, 682 018, India.
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Barba V, Marín-Benito JM, García-Delgado C, Sánchez-Martín MJ, Rodríguez-Cruz MS. Assessment of 14C-prosulfocarb dissipation mechanism in soil after amendment and its impact on the microbial community. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2019; 182:109395. [PMID: 31272022 DOI: 10.1016/j.ecoenv.2019.109395] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2019] [Revised: 06/24/2019] [Accepted: 06/26/2019] [Indexed: 06/09/2023]
Abstract
Adding organic amendments to soil could modify the bioavailability of herbicides and lead to changes in the microbial community's activity and structure. The objective here was to study the dissipation and total mass balance of 14C-labeled prosulfocarb applied at two rates (4 and 10 mg kg-1) in unamended and green compost (GC)-amended soil. Soil dehydrogenase activity (DHA) and phospholipid fatty acid (PLFA) profile analysis were determined to evaluate the effect of herbicide residues on microbial community's activity and structure over the dissipation period. The dissipation rate of prosulfocarb decreased after soil amendment due to higher herbicide adsorption by the amended soil. The 50% dissipation time (DT50) increased 1.7 times in the unamended soil when the concentration of prosulfocarb increased 2.5 times. The mass balance results indicate that the sum of water and organic extractable fractions represented the highest amounts up to the dissipation of 50% 14C-prosulfocarb. The 14C-herbicide was then mainly mineralized (up to 11%-31%) or formed non-extractable residues (up to 35%-44%). The amount of 14C-prosulfocarb residues extracted with methanol was slightly higher in amended soils than in unamended ones. 14C-prosulfocarb mineralization was higher in unamended soils than in amended ones. The formation of non-extractable residues was continuous, and increased over time. Soil DHA decreased in the unamended soil and was maintained in the GC-amended soil at the end of the assay. The microbial structure was barely disturbed over the prosulfocarb degradation process, although it was clearly influenced by the application of GC. The results obtained reveal the influence organic amendment has on herbicide bioavailability to decrease its biodegradation and buffer its impact on the soil microbial structure.
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Affiliation(s)
- Víctor Barba
- Institute of Natural Resources and Agrobiology of Salamanca (IRNASA-CSIC), Cordel de Merinas 40-52, 37008, Salamanca, Spain
| | - Jesús M Marín-Benito
- Institute of Natural Resources and Agrobiology of Salamanca (IRNASA-CSIC), Cordel de Merinas 40-52, 37008, Salamanca, Spain
| | - Carlos García-Delgado
- Institute of Natural Resources and Agrobiology of Salamanca (IRNASA-CSIC), Cordel de Merinas 40-52, 37008, Salamanca, Spain
| | - María J Sánchez-Martín
- Institute of Natural Resources and Agrobiology of Salamanca (IRNASA-CSIC), Cordel de Merinas 40-52, 37008, Salamanca, Spain
| | - M Sonia Rodríguez-Cruz
- Institute of Natural Resources and Agrobiology of Salamanca (IRNASA-CSIC), Cordel de Merinas 40-52, 37008, Salamanca, Spain.
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Thiour-Mauprivez C, Martin-Laurent F, Calvayrac C, Barthelmebs L. Effects of herbicide on non-target microorganisms: Towards a new class of biomarkers? THE SCIENCE OF THE TOTAL ENVIRONMENT 2019; 684:314-325. [PMID: 31153078 DOI: 10.1016/j.scitotenv.2019.05.230] [Citation(s) in RCA: 59] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/22/2019] [Revised: 05/02/2019] [Accepted: 05/16/2019] [Indexed: 05/19/2023]
Abstract
Conventional agriculture still relies on the general use of agrochemicals (herbicides, fungicides and insecticides) to control various pests (weeds, fungal pathogens and insects), to ensure the yield of crop and to feed a constantly growing population. The generalized use of pesticides in agriculture leads to the contamination of soil and other connected environmental resources. The persistence of pesticide residues in soil is identified as a major threat for in-soil living organisms that are supporting an important number of ecosystem services. Although authorities released pesticides on the market only after their careful and thorough evaluation, the risk assessment for in-soil living organisms is unsatisfactory, particularly for microorganisms for which pesticide toxicity is solely considered by one global test measuring N mineralization. Recently, European Food Safety Authority (EFSA) underlined the lack of standardized methods to assess pesticide ecotoxicological effects on soil microorganisms. Within this context, there is an obvious need to develop innovative microbial markers sensitive to pesticide exposure. Biomarkers that reveal direct effects of pesticides on microorganisms are often viewed as the panacea. Such biomarkers can only be developed for pesticides having a mode of action inhibiting a specific enzyme not only found in the targeted organisms but also in microorganisms which are considered as "non-target organisms" by current regulations. This review explores possible ways of innovation to develop such biomarkers for herbicides. We scanned the herbicide classification by considering the mode of action, the targeted enzyme and the ecotoxicological effects of each class of active substance in order to identify those that can be tracked using sensitive microbial markers.
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Affiliation(s)
- Clémence Thiour-Mauprivez
- Univ. Perpignan Via Domitia, Biocapteurs-Analyses-Environnement, 66860 Perpignan, France; Laboratoire de Biodiversité et Biotechnologies Microbiennes, USR 3579 Sorbonne Universités (UPMC) Paris 6 et CNRS Observatoire Océanologique, 66650 Banyuls-sur-Mer, France; AgroSup Dijon, INRA, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, F-21065 Dijon, France
| | - Fabrice Martin-Laurent
- AgroSup Dijon, INRA, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, F-21065 Dijon, France
| | - Christophe Calvayrac
- Univ. Perpignan Via Domitia, Biocapteurs-Analyses-Environnement, 66860 Perpignan, France; Laboratoire de Biodiversité et Biotechnologies Microbiennes, USR 3579 Sorbonne Universités (UPMC) Paris 6 et CNRS Observatoire Océanologique, 66650 Banyuls-sur-Mer, France
| | - Lise Barthelmebs
- Univ. Perpignan Via Domitia, Biocapteurs-Analyses-Environnement, 66860 Perpignan, France; Laboratoire de Biodiversité et Biotechnologies Microbiennes, USR 3579 Sorbonne Universités (UPMC) Paris 6 et CNRS Observatoire Océanologique, 66650 Banyuls-sur-Mer, France.
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14
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Rhizospheric Microbacterium sp. P27 Showing Potential of Lindane Degradation and Plant Growth Promoting Traits. Curr Microbiol 2019; 76:888-895. [PMID: 31093691 DOI: 10.1007/s00284-019-01703-x] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2019] [Accepted: 05/08/2019] [Indexed: 10/26/2022]
Abstract
Lindane is an organochlorine pesticide that is highly persistent in the environment. The amassing of lindane has been identified worldwide and has been found to be very toxic to the environment, human, and animal health. Therefore, urgent consideration and management of the problem is necessary. The current study intends to isolate and identify lindane degrading rhizospheric bacteria from Phragmites karka and to study its degradation kinetics. Also, plant growth promoting potential of the bacterium was evaluated in the presence and absence of studied pesticide. Rhizospheric bacteria were isolated by standard enrichment technique in Mineral Salt Medium. Microbacterium sp. P27 showed the highest degradation percentage, 82.7 ± 1.79% for 50 mg l-1 lindane, after 15 days. Degradation was also studied at different concentrations of lindane. Maximum degradation was achieved at 10 mg l-1 followed by 50 mg l-1 and 100 mg l-1 lindane. Microbacterium sp. P27 showed positive result for Indole-3-acetic acid production, ammonia production, and 1-aminocyclopropane-1-carboxylate deaminase activity. Presence of lindane revealed a concentration-dependent decrease in plant growth promoting activity. Since the isolated bacterial strain possesses lindane degrading capacity and also other characters that help in plant growth promotion, the isolate can be an important candidate for the progress of bioremediation strategy.
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Armalytė J, Skerniškytė J, Bakienė E, Krasauskas R, Šiugždinienė R, Kareivienė V, Kerzienė S, Klimienė I, Sužiedėlienė E, Ružauskas M. Microbial Diversity and Antimicrobial Resistance Profile in Microbiota From Soils of Conventional and Organic Farming Systems. Front Microbiol 2019; 10:892. [PMID: 31105678 PMCID: PMC6498881 DOI: 10.3389/fmicb.2019.00892] [Citation(s) in RCA: 48] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2018] [Accepted: 04/08/2019] [Indexed: 11/13/2022] Open
Abstract
Soil is one of the biggest reservoirs of microbial diversity, yet the processes that define the community dynamics are not fully understood. Apart from soil management being vital for agricultural purposes, it is also considered a favorable environment for the evolution and development of antimicrobial resistance, which is due to its high complexity and ongoing competition between the microorganisms. Different approaches to agricultural production might have specific outcomes for soil microbial community composition and antibiotic resistance phenotype. Therefore in this study we aimed to compare the soil microbiota and its resistome in conventional and organic farming systems that are continually influenced by the different treatment (inorganic fertilizers and pesticides vs. organic manure and no chemical pest management). The comparison of the soil microbial communities revealed no major differences among the main phyla of bacteria between the two farming styles with similar soil structure and pH. Only small differences between the lower taxa could be observed indicating that the soil community is stable, with minor shifts in composition being able to handle the different styles of treatment and fertilization. It is still unclear what level of intensity can change microbial composition but current conventional farming in Central Europe demonstrates acceptable level of intensity for soil bacterial communities. When the resistome of the soils was assessed by screening the total soil DNA for clinically relevant and soil-derived antibiotic resistance genes, a low variety of resistance determinants was detected (resistance to β-lactams, aminoglycosides, tetracycline, erythromycin, and rifampicin) with no clear preference for the soil farming type. The same soil samples were also used to isolate antibiotic resistant cultivable bacteria, which were predominated by highly resistant isolates of Pseudomonas, Stenotrophomonas, Sphingobacterium and Chryseobacterium genera. The resistance of these isolates was largely dependent on the efflux mechanisms, the soil Pseudomonas spp. relying mostly on RND, while Stenotrophomonas spp. and Chryseobacterium spp. on RND and ABC transporters.
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Affiliation(s)
- Julija Armalytė
- Life Sciences Center, Institute of Biosciences, Vilnius University, Vilnius, Lithuania
| | - Jūratė Skerniškytė
- Life Sciences Center, Institute of Biosciences, Vilnius University, Vilnius, Lithuania
| | - Elena Bakienė
- Life Sciences Center, Institute of Biosciences, Vilnius University, Vilnius, Lithuania
| | - Renatas Krasauskas
- Life Sciences Center, Institute of Biosciences, Vilnius University, Vilnius, Lithuania
| | - Rita Šiugždinienė
- Institute of Microbiology and Virology, Lithuanian University of Health Sciences, Kaunas, Lithuania
| | - Violeta Kareivienė
- Institute of Microbiology and Virology, Lithuanian University of Health Sciences, Kaunas, Lithuania
| | - Sigita Kerzienė
- Institute of Microbiology and Virology, Lithuanian University of Health Sciences, Kaunas, Lithuania
| | - Irena Klimienė
- Institute of Microbiology and Virology, Lithuanian University of Health Sciences, Kaunas, Lithuania
| | - Edita Sužiedėlienė
- Life Sciences Center, Institute of Biosciences, Vilnius University, Vilnius, Lithuania
| | - Modestas Ružauskas
- Institute of Microbiology and Virology, Lithuanian University of Health Sciences, Kaunas, Lithuania
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16
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García-Delgado C, Barba-Vicente V, Marín-Benito JM, Mariano Igual J, Sánchez-Martín MJ, Sonia Rodríguez-Cruz M. Influence of different agricultural management practices on soil microbial community over dissipation time of two herbicides. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019; 646:1478-1488. [PMID: 30235633 DOI: 10.1016/j.scitotenv.2018.07.395] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/13/2018] [Revised: 07/20/2018] [Accepted: 07/27/2018] [Indexed: 06/08/2023]
Abstract
Soil microbiology could be affected by the presence of pesticide residues during intensive farming, potentially threatening the soil environment. The aim here was to assess the dissipation of the herbicides triasulfuron and prosulfocarb, applied as a combined commercial formulation, and the changes in soil microbial communities (through the profile of phospholipid fatty acids (PLFAs) extracted from the soil) during the dissipation time of the herbicides under field conditions. The dissipation of herbicides and the soil microbial structure were assessed under different agricultural practices, such as the repeated application of herbicides (twice), in unamended and amended soils with two organic amendments derived from green compost (GC1 and GC2) and with non-irrigation and irrigation regimes. The results obtained indicate slower dissipation for triasulfuron than for prosulfocarb. The 50% dissipation time (DT50) decreased under all conditions for the second application of triasulfuron, although not for prosulfocarb. The DT50 values for both herbicides increased in the GC2 amended soil with the highest organic carbon (OC) content. The DT50 values decreased for prosulfocarb with irrigation, but not for triasulfuron, despite its higher water solubility. The herbicides did not have any significant effects on the relative population of Gram-negative and Gram-positive bacteria during the assay, but the relative abundance of Actinobacteria increased in all the soils with herbicides. At the end of the assay (215 days), the negative effects of herbicides on fungi abundance were significant (p < 0.05) for all the treatments. These microbiological changes were detected in non-irrigated and irrigated soils, and were more noticeable after the second application of herbicides. Actinobacteria could be responsible for the modification of herbicide degradation rates, which tend to be faster after the second application. This study makes a useful contribution to the evaluation of the soil environment and microbiological risks due to the long-term repeated application of herbicides under different agricultural management practices.
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Affiliation(s)
- Carlos García-Delgado
- Institute of Natural Resources and Agrobiology of Salamanca (IRNASA-CSIC), 40-52 Cordel de Merinas, 37008 Salamanca, Spain
| | - Víctor Barba-Vicente
- Institute of Natural Resources and Agrobiology of Salamanca (IRNASA-CSIC), 40-52 Cordel de Merinas, 37008 Salamanca, Spain
| | - Jesús M Marín-Benito
- Institute of Natural Resources and Agrobiology of Salamanca (IRNASA-CSIC), 40-52 Cordel de Merinas, 37008 Salamanca, Spain
| | - J Mariano Igual
- Institute of Natural Resources and Agrobiology of Salamanca (IRNASA-CSIC), 40-52 Cordel de Merinas, 37008 Salamanca, Spain
| | - María J Sánchez-Martín
- Institute of Natural Resources and Agrobiology of Salamanca (IRNASA-CSIC), 40-52 Cordel de Merinas, 37008 Salamanca, Spain
| | - M Sonia Rodríguez-Cruz
- Institute of Natural Resources and Agrobiology of Salamanca (IRNASA-CSIC), 40-52 Cordel de Merinas, 37008 Salamanca, Spain.
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17
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Pose-Juan E, Marín-Benito JM, Sánchez-Martín MJ, Rodríguez-Cruz MS. Dissipation of herbicides after repeated application in soils amended with green compost and sewage sludge. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2018; 223:1068-1077. [PMID: 30096747 DOI: 10.1016/j.jenvman.2018.07.026] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/19/2018] [Revised: 06/13/2018] [Accepted: 07/09/2018] [Indexed: 06/08/2023]
Abstract
Certain agricultural practices, such as the repeated application of herbicides or organic amendments to soil, can influence herbicide dissipation. This research has studied the effects of two repeated applications of mesotrione, pethoxamid, and triasulfuron on their dissipation rates in unamended soil (S) and soil amended with green compost (S+GC) or sewage sludge (S+SS). The dissipation experiment has also included an evaluation of the adsorption of the three herbicides by soils and of changes in soil dehydrogenase activity (DHA). The adsorption of the three herbicides by amended soils (Kf range 0.83-2.98) was higher than by unamended soil (Kf range 0.20-0.64). The adsorption coefficients (Kd) of mesotrione and triasulfuron were higher for S+SS, while that of pethoxamid was higher for S+GC, but no relationship between values for the time to 50% degradation (DT50) and adsorption coefficients could be determined. The repeated application of mesotrione decreased its dissipation rate in unamended soil (DT50 increased from 4.75 to 8.15 days) and amended soils (DT50 increased from 11.7 to 28.2 days in S+GC and from 17.7 to 37.9 in S+SS), whereas the repeated application of pethoxamid increased its dissipation rate in all the treatments, and the rate for triasulfuron increased only in amended soils. The highest DT50 values for pethoxamid (12.3 days) and triasulfuron (57.1 days) were in S+GC, and the lowest in S+SS (8.35 and 24.7 days). Soil DHA was stimulated by the presence of GC in the soil and by the first application of mesotrione. The second application of mesotrione and pethoxamid positively affected soil DHA, but this did not occur for triasulfuron. The repeated applications of herbicides and soil organic amendments have different effects on herbicide dissipation, adsorption, and soil DHA, and they should be taken into account when assessing soil quality and other potential environmental implications of pesticide use.
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Affiliation(s)
- Eva Pose-Juan
- Institute of Natural Resources and Agrobiology of Salamanca (IRNASA-CSIC). 40-52 Cordel de Merinas, 37008 Salamanca, Spain.
| | - Jesús M Marín-Benito
- Institute of Natural Resources and Agrobiology of Salamanca (IRNASA-CSIC). 40-52 Cordel de Merinas, 37008 Salamanca, Spain.
| | - María J Sánchez-Martín
- Institute of Natural Resources and Agrobiology of Salamanca (IRNASA-CSIC). 40-52 Cordel de Merinas, 37008 Salamanca, Spain.
| | - M Sonia Rodríguez-Cruz
- Institute of Natural Resources and Agrobiology of Salamanca (IRNASA-CSIC). 40-52 Cordel de Merinas, 37008 Salamanca, Spain.
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18
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Mackelprang R, Grube AM, Lamendella R, Jesus EDC, Copeland A, Liang C, Jackson RD, Rice CW, Kapucija S, Parsa B, Tringe SG, Tiedje JM, Jansson JK. Microbial Community Structure and Functional Potential in Cultivated and Native Tallgrass Prairie Soils of the Midwestern United States. Front Microbiol 2018; 9:1775. [PMID: 30158906 PMCID: PMC6104126 DOI: 10.3389/fmicb.2018.01775] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2018] [Accepted: 07/16/2018] [Indexed: 11/19/2022] Open
Abstract
The North American prairie covered about 3.6 million-km2 of the continent prior to European contact. Only 1-2% of the original prairie remains, but the soils that developed under these prairies are some of the most productive and fertile in the world, containing over 35% of the soil carbon in the continental United States. Cultivation may alter microbial diversity and composition, influencing the metabolism of carbon, nitrogen, and other elements. Here, we explored the structure and functional potential of the soil microbiome in paired cultivated-corn (at the time of sampling) and never-cultivated native prairie soils across a three-states transect (Wisconsin, Iowa, and Kansas) using metagenomic and 16S rRNA gene sequencing and lipid analysis. At the Wisconsin site, we also sampled adjacent restored prairie and switchgrass plots. We found that agricultural practices drove differences in community composition and diversity across the transect. Microbial biomass in prairie samples was twice that of cultivated soils, but alpha diversity was higher with cultivation. Metagenome analyses revealed denitrification and starch degradation genes were abundant across all soils, as were core genes involved in response to osmotic stress, resource transport, and environmental sensing. Together, these data indicate that cultivation shifted the microbiome in consistent ways across different regions of the prairie, but also suggest that many functions are resilient to changes caused by land management practices - perhaps reflecting adaptations to conditions common to tallgrass prairie soils in the region (e.g., soil type, parent material, development under grasses, temperature and rainfall patterns, and annual freeze-thaw cycles). These findings are important for understanding the long-term consequences of land management practices to prairie soil microbial communities and their genetic potential to carry out key functions.
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Affiliation(s)
- Rachel Mackelprang
- Department of Biology, California State University, Northridge, Northridge, CA, United States
| | - Alyssa M. Grube
- Department of Biology, Juniata College, Huntingdon, PA, United States
| | - Regina Lamendella
- Department of Biology, Juniata College, Huntingdon, PA, United States
| | - Ederson da C. Jesus
- Center for Microbial Ecology, Michigan State University, East Lansing, MI, United States
- Great Lakes Bioenergy Research Center, U.S. Department of Energy, University of Wisconsin–Madison, Madison, WI, United States
| | - Alex Copeland
- U.S. Department of Energy Joint Genome Institute, Walnut Creek, CA, United States
| | - Chao Liang
- Great Lakes Bioenergy Research Center, U.S. Department of Energy, University of Wisconsin–Madison, Madison, WI, United States
- Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang, China
| | - Randall D. Jackson
- Great Lakes Bioenergy Research Center, U.S. Department of Energy, University of Wisconsin–Madison, Madison, WI, United States
- Department of Agronomy, University of Wisconsin–Madison, Madison, WI, United States
| | - Charles W. Rice
- Department of Agronomy, Kansas State University, Manhattan, KS, United States
| | - Stefanie Kapucija
- Department of Biology, California State University, Northridge, Northridge, CA, United States
| | - Bayan Parsa
- Department of Biology, California State University, Northridge, Northridge, CA, United States
| | - Susannah G. Tringe
- U.S. Department of Energy Joint Genome Institute, Walnut Creek, CA, United States
| | - James M. Tiedje
- Center for Microbial Ecology, Michigan State University, East Lansing, MI, United States
- Great Lakes Bioenergy Research Center, U.S. Department of Energy, University of Wisconsin–Madison, Madison, WI, United States
| | - Janet K. Jansson
- Earth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA, United States
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19
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Nieva AS, Bailleres MA, Llames ME, Taboada MA, Ruiz OA, Menéndez A. Promotion of Lotus tenuis in the Flooding Pampa (Argentina) increases the soil fungal diversity. FUNGAL ECOL 2018. [DOI: 10.1016/j.funeco.2018.01.001] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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20
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Marín-Benito JM, Barba V, Ordax JM, Andrades MS, Sánchez-Martín MJ, Rodríguez-Cruz MS. Application of green compost as amendment in an agricultural soil: Effect on the behaviour of triasulfuron and prosulfocarb under field conditions. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2018; 207:180-191. [PMID: 29174993 DOI: 10.1016/j.jenvman.2017.11.024] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2017] [Revised: 11/06/2017] [Accepted: 11/09/2017] [Indexed: 06/07/2023]
Abstract
Herbicides are essential in agricultural systems for maintaining crop yields, as weeds compromise grain production. Furthermore, the application of organic amendments to soil is an increasingly frequent agricultural practice for avoiding irreversible soil degradation. However, this practice could modify the behaviour of the herbicides applied, with implications for their absorption by weeds. This study evaluated the dissipation, persistence and mobility of the herbicides triasulfuron and prosulfocarb in a sandy clay loam soil unamended and amended with green compost (GC) in a field experiment using single or combined commercial formulations of both herbicides. The study was carried out in experimental plots (eight treatments × three replicates) corresponding to unamended soil and soil amended with GC, untreated and treated with the herbicide formulations Logran®, Auros® and Auros Plus® over 100 days. The half-life (DT50) of triasulfuron applied individually was 19.4 days, and increased in the GC-amended soil (46.7 days) due to its higher adsorption by this soil, although non-significant differences between DT50 values were found when it was applied in combination with prosulfocarb. Prosulfocarb dissipated faster than triasulfuron under all the conditions assayed, but non-significant differences were observed for the different treatments. The analysis of the herbicides at different soil depths (0-50 cm) after their application confirmed the leaching of both herbicides to deeper soil layers under all conditions, although larger amounts of residues were found in the 0-10 and 10-20 cm layers. The application of GC to the soil increased the persistence of both herbicides, and prevented the rapid leaching of triasulfuron in the soil, but the leaching of prosulfocarb was not inhibited. The influence of single or combined formulations was observed for triasulfuron, but not for prosulfocarb. The results obtained highlight the interest of obtaining field data to design rational joint applications of GC and herbicides to prevent the possible decrease in their effectiveness for weeds or the risk of water contamination.
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Affiliation(s)
- J M Marín-Benito
- Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA-CSIC), C/ Cordel de Merinas 40-52, 37008 Salamanca, Spain
| | - V Barba
- Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA-CSIC), C/ Cordel de Merinas 40-52, 37008 Salamanca, Spain
| | - J M Ordax
- Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA-CSIC), C/ Cordel de Merinas 40-52, 37008 Salamanca, Spain
| | - M S Andrades
- Departamento de Agricultura y Alimentación, Universidad de La Rioja, C/ Madre de Dios 51, 26006 Logroño, Spain
| | - M J Sánchez-Martín
- Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA-CSIC), C/ Cordel de Merinas 40-52, 37008 Salamanca, Spain
| | - M S Rodríguez-Cruz
- Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA-CSIC), C/ Cordel de Merinas 40-52, 37008 Salamanca, Spain.
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